RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 ZNF674Q2M3X9 581 aa11.07□□□□□ -0.64
NEK3-205ENST00000610828 C8orf31Q8N9H6 132 aa11.07□□□□□ -0.64
NEK3-205ENST00000610828 OR5B3Q8NH48 314 aa11.07□□□□□ -0.64
NEK3-205ENST00000610828 ZNF596Q8TC21 504 aa11.07□□□□□ -0.64
NEK3-205ENST00000610828 C1orf159Q96HA4 380 aa11.07□□□□□ -0.64
NEK3-205ENST00000610828 NABP2Q9BQ15 211 aa11.07□□□□□ -0.64
NEK3-205ENST00000610828 RALYQ9UKM9 306 aaKnown RBP11.07□□□□□ -0.64
NEK3-205ENST00000610828 LSM4Q9Y4Z0 139 aaKnown RBP11.07□□□□□ -0.64
NEK3-205ENST00000610828 TRBV23-1A0A0A0MS06 115 aa11.06□□□□□ -0.64
NEK3-205ENST00000610828 PAGE4O60829 102 aa11.06□□□□□ -0.64
NEK3-205ENST00000610828 TMEM177Q53S58 311 aa11.06□□□□□ -0.64
NEK3-205ENST00000610828 WDR25Q64LD2 544 aaPredicted RBP11.06□□□□□ -0.64
NEK3-205ENST00000610828 FAM71F2Q6NXP2 309 aa11.06□□□□□ -0.64
NEK3-205ENST00000610828 TGIF2LXQ8IUE1 241 aa11.06□□□□□ -0.64
NEK3-205ENST00000610828 OR4F5Q8NH21 305 aa11.06□□□□□ -0.64
NEK3-205ENST00000610828 RPUSD4Q96CM3 377 aaKnown RBP11.06□□□□□ -0.64
NEK3-205ENST00000610828 OR4F4Q96R69 305 aa11.06□□□□□ -0.64
NEK3-205ENST00000610828 SMIM7Q9BQ49 75 aa11.06□□□□□ -0.64
NEK3-205ENST00000610828 COMMD5Q9GZQ3 224 aa11.06□□□□□ -0.64
NEK3-205ENST00000610828 SDF2L1Q9HCN8 221 aa11.06□□□□□ -0.64
NEK3-205ENST00000610828 URGCP-MRPS24S4R325 110 aa11.06□□□□□ -0.64
NEK3-205ENST00000610828 NCOR2Q9Y618 2525 aa11.06□□□□□ -0.64
NEK3-205ENST00000610828 DLX1P56177 255 aa11.06□□□□□ -0.64
NEK3-205ENST00000610828 B2MP61769 119 aa11.06□□□□□ -0.64
NEK3-205ENST00000610828 RPL8P62917 257 aaKnown RBP11.06□□□□□ -0.64
NEK3-205ENST00000610828 LY6DQ14210 128 aa11.06□□□□□ -0.64
NEK3-205ENST00000610828 PDPNQ86YL7 162 aa11.06□□□□□ -0.64
NEK3-205ENST00000610828 C11orf42Q8N5U0 333 aa11.06□□□□□ -0.64
NEK3-205ENST00000610828 OR10W1Q8NGF6 305 aa11.06□□□□□ -0.64
NEK3-205ENST00000610828 ST6GALNAC6Q969X2 333 aa11.06□□□□□ -0.64
NEK3-205ENST00000610828 TMEM133Q9H2Q1 129 aa11.06□□□□□ -0.64
NEK3-205ENST00000610828 A0A087X0M5 115 aa11.05□□□□□ -0.64
NEK3-205ENST00000610828 A0A1B0GX30 115 aa11.05□□□□□ -0.64
NEK3-205ENST00000610828 PCP4L1A6NKN8 68 aa11.05□□□□□ -0.64
NEK3-205ENST00000610828 B4DEV8 164 aa11.05□□□□□ -0.64
NEK3-205ENST00000610828 ZNF343Q6P1L6 599 aa11.05□□□□□ -0.64
NEK3-205ENST00000610828 RAB1CQ92928 201 aa11.05□□□□□ -0.64
NEK3-205ENST00000610828 FAM122AQ96E09 287 aa11.05□□□□□ -0.64
NEK3-205ENST00000610828 WASHC3Q9Y3C0 194 aa11.05□□□□□ -0.64
NEK3-205ENST00000610828 TMEM250H0YL14 139 aa11.05□□□□□ -0.64
NEK3-205ENST00000610828 PRB3Q04118 309 aaPredicted RBP11.05□□□□□ -0.64
NEK3-205ENST00000610828 RAB31Q13636 194 aa11.05□□□□□ -0.64
NEK3-205ENST00000610828 NEIL1Q96FI4 390 aaPredicted RBP11.05□□□□□ -0.64
NEK3-205ENST00000610828 YPEL4Q96NS1 127 aa11.05□□□□□ -0.64
NEK3-205ENST00000610828 SIRT7Q9NRC8 400 aa11.05□□□□□ -0.64
NEK3-205ENST00000610828 KCNIP2Q9NS61 270 aa11.05□□□□□ -0.64
NEK3-205ENST00000610828 LY6HO94772 140 aa11.04□□□□□ -0.64
NEK3-205ENST00000610828 IGHV2-70P01814 119 aa11.04□□□□□ -0.64
NEK3-205ENST00000610828 IGFBP2P18065 325 aa11.04□□□□□ -0.64
NEK3-205ENST00000610828 USF1P22415 310 aaPredicted RBP11.04□□□□□ -0.64
NEK3-205ENST00000610828 ZNF137PP52743 207 aa11.04□□□□□ -0.64
NEK3-205ENST00000610828 UBE2G2P60604 165 aa11.04□□□□□ -0.64
NEK3-205ENST00000610828 SNRPEP62304 92 aaKnown RBP11.04□□□□□ -0.64
NEK3-205ENST00000610828 MALRD1Q5VYJ5 2156 aa11.04□□□□□ -0.64
NEK3-205ENST00000610828 ZNF841Q6ZN19 808 aa11.04□□□□□ -0.64
NEK3-205ENST00000610828 STPG3Q8N7X2 389 aa11.04□□□□□ -0.64
NEK3-205ENST00000610828 VSTM2AQ8TAG5 236 aa11.04□□□□□ -0.64
NEK3-205ENST00000610828 TACC2O95359 2948 aa11.04□□□□□ -0.64
NEK3-205ENST00000610828 C11orf94C9JXX5 98 aa11.04□□□□□ -0.64
NEK3-205ENST00000610828 AGAP20933 346 aa11.04□□□□□ -0.64
NEK3-205ENST00000610828 IL3RAP26951 378 aa11.04□□□□□ -0.64
NEK3-205ENST00000610828 PPOXP50336 477 aa11.04□□□□□ -0.64
NEK3-205ENST00000610828 ELOBQ15370 118 aa11.04□□□□□ -0.64
NEK3-205ENST00000610828 MOB3BQ86TA1 216 aa11.04□□□□□ -0.64
NEK3-205ENST00000610828 OR1L8Q8NGR8 309 aa11.04□□□□□ -0.64
NEK3-205ENST00000610828 ABHD5Q8WTS1 349 aa11.04□□□□□ -0.64
NEK3-205ENST00000610828 Q8WTZ3 238 aa11.04□□□□□ -0.64
NEK3-205ENST00000610828 TMEM204Q9BSN7 226 aa11.04□□□□□ -0.64
NEK3-205ENST00000610828 PARLQ9H300 379 aa11.04□□□□□ -0.64
NEK3-205ENST00000610828 NDUFA4L2Q9NRX3 87 aa11.04□□□□□ -0.64
NEK3-205ENST00000610828 NAT8Q9UHE5 227 aa11.04□□□□□ -0.64
NEK3-205ENST00000610828 IGHV3-72A0A0B4J1Y9 119 aa11.03□□□□□ -0.64
NEK3-205ENST00000610828 CXorf65A6NEN9 183 aa11.03□□□□□ -0.64
NEK3-205ENST00000610828 E7EUB6 86 aa11.03□□□□□ -0.64
NEK3-205ENST00000610828 ENSAO43768 121 aaKnown RBP11.03□□□□□ -0.64
NEK3-205ENST00000610828 ARL14EPLP0DKL9 152 aa11.03□□□□□ -0.64
NEK3-205ENST00000610828 MAS1LP35410 378 aa11.03□□□□□ -0.64
NEK3-205ENST00000610828 ADIRFQ15847 76 aa11.03□□□□□ -0.64
NEK3-205ENST00000610828 C2orf83Q53S99 150 aa11.03□□□□□ -0.64
NEK3-205ENST00000610828 PCGF1Q9BSM1 259 aa11.03□□□□□ -0.64
NEK3-205ENST00000610828 IGHV2-26A0A0B4J1V2 119 aa11.03□□□□□ -0.64
NEK3-205ENST00000610828 S100A6P06703 90 aa11.03□□□□□ -0.64
NEK3-205ENST00000610828 RNASE2P10153 161 aaKnown RBP11.03□□□□□ -0.64
NEK3-205ENST00000610828 ERHP84090 104 aaKnown RBP11.03□□□□□ -0.64
NEK3-205ENST00000610828 TMEM241Q24JQ0 296 aa11.03□□□□□ -0.64
NEK3-205ENST00000610828 CST9LP1Q5W188 147 aa11.03□□□□□ -0.64
NEK3-205ENST00000610828 SPNS3Q6ZMD2 512 aa11.03□□□□□ -0.64
NEK3-205ENST00000610828 CYP2G1PQ6ZSU1 146 aa11.03□□□□□ -0.64
NEK3-205ENST00000610828 TMEM167AQ8TBQ9 72 aa11.03□□□□□ -0.64
NEK3-205ENST00000610828 RAB1BQ9H0U4 201 aa11.03□□□□□ -0.64
NEK3-205ENST00000610828 PPIAL4CA0A0B4J2A2 164 aa11.02□□□□□ -0.65
NEK3-205ENST00000610828 FNDC10F2Z333 226 aa11.02□□□□□ -0.65
NEK3-205ENST00000610828 SLC25A17O43808 307 aa11.02□□□□□ -0.65
NEK3-205ENST00000610828 IGLV2-23P01705 113 aa11.02□□□□□ -0.65
NEK3-205ENST00000610828 STAG3L2P0CL84 134 aa11.02□□□□□ -0.65
NEK3-205ENST00000610828 STAG3L3P0CL85 134 aa11.02□□□□□ -0.65
NEK3-205ENST00000610828 PPIAL4GP0DN37 164 aa11.02□□□□□ -0.65
NEK3-205ENST00000610828 MC5RP33032 325 aa11.02□□□□□ -0.65
NEK3-205ENST00000610828 RPS10P46783 165 aaKnown RBP11.02□□□□□ -0.65
NEK3-205ENST00000610828 RPL29P47914 159 aaKnown RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms