RNA–Protein interactions for RNA: ENST00000607494.5

LINC00458-206, long intergenic non-protein coding RNA 458, humanhuman

TSL 3 BASIC

Gene LINC00458, Length 849 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-206ENST00000607494 CCL1P22362 96 aa3.04□□□□□ -1.92
LINC00458-206ENST00000607494 CAPZBP47756 277 aa3.04□□□□□ -1.92
LINC00458-206ENST00000607494 MRPL51Q4U2R6 128 aaKnown RBP3.04□□□□□ -1.92
LINC00458-206ENST00000607494 KRTAP5-7Q6L8G8 165 aa3.04□□□□□ -1.92
LINC00458-206ENST00000607494 C5orf46Q6UWT4 87 aa3.04□□□□□ -1.92
LINC00458-206ENST00000607494 C1orf64Q8NEQ6 169 aa3.04□□□□□ -1.92
LINC00458-206ENST00000607494 OR2D3Q8NGH3 330 aa3.04□□□□□ -1.92
LINC00458-206ENST00000607494 OR1L8Q8NGR8 309 aa3.04□□□□□ -1.92
LINC00458-206ENST00000607494 OR2T27Q8NH04 317 aa3.04□□□□□ -1.92
LINC00458-206ENST00000607494 SLC25A44Q96H78 314 aaPredicted RBP3.04□□□□□ -1.92
LINC00458-206ENST00000607494 HHLA2Q9UM44 414 aa3.04□□□□□ -1.92
LINC00458-206ENST00000607494 TTC28Q96AY4 2481 aa3.04□□□□□ -1.92
LINC00458-206ENST00000607494 BRCA2P51587 3418 aa3.04□□□□□ -1.92
LINC00458-206ENST00000607494 DOCK3Q8IZD9 2030 aa3.03□□□□□ -1.92
LINC00458-206ENST00000607494 SMIM9A6NGZ8 99 aa3.03□□□□□ -1.92
LINC00458-206ENST00000607494 A8MWP6 167 aa3.03□□□□□ -1.92
LINC00458-206ENST00000607494 NSA2O95478 260 aaKnown RBP3.03□□□□□ -1.92
LINC00458-206ENST00000607494 ZNF14P17017 642 aaPredicted RBP3.03□□□□□ -1.92
LINC00458-206ENST00000607494 TAS2R45P59539 299 aa3.03□□□□□ -1.92
LINC00458-206ENST00000607494 HOXC5Q00444 222 aa3.03□□□□□ -1.92
LINC00458-206ENST00000607494 PMAIP1Q13794 54 aa3.03□□□□□ -1.92
LINC00458-206ENST00000607494 TMED2Q15363 201 aa3.03□□□□□ -1.92
LINC00458-206ENST00000607494 FAM201AQ5SY85 155 aa3.03□□□□□ -1.92
LINC00458-206ENST00000607494 ALKAL1Q6UXT8 129 aa3.03□□□□□ -1.92
LINC00458-206ENST00000607494 CALHM3Q86XJ0 350 aa3.03□□□□□ -1.92
LINC00458-206ENST00000607494 NKX6-2Q9C056 277 aaPredicted RBP3.03□□□□□ -1.92
LINC00458-206ENST00000607494 TLNRD1Q9H1K6 362 aa3.03□□□□□ -1.92
LINC00458-206ENST00000607494 DUSP21Q9H596 190 aa3.03□□□□□ -1.92
LINC00458-206ENST00000607494 ANAPC10Q9UM13 185 aa3.03□□□□□ -1.92
LINC00458-206ENST00000607494 PXMP4Q9Y6I8 212 aa3.03□□□□□ -1.92
LINC00458-206ENST00000607494 ATAD5Q96QE3 1844 aa3.03□□□□□ -1.93
LINC00458-206ENST00000607494 DDX60LQ5H9U9 1706 aaKnown RBP3.02□□□□□ -1.93
LINC00458-206ENST00000607494 A0A1B0GV50 99 aa3.02□□□□□ -1.93
LINC00458-206ENST00000607494 OR6C6A6NF89 314 aa3.02□□□□□ -1.93
LINC00458-206ENST00000607494 OR4C45A6NMZ5 311 aa3.02□□□□□ -1.93
LINC00458-206ENST00000607494 GGTLC3B5MD39 225 aa3.02□□□□□ -1.93
LINC00458-206ENST00000607494 EEF1E1-BLOC1S5C9J1V9 151 aa3.02□□□□□ -1.93
LINC00458-206ENST00000607494 FAM228BP0C875 321 aa3.02□□□□□ -1.93
LINC00458-206ENST00000607494 CD79AP11912 226 aa3.02□□□□□ -1.93
LINC00458-206ENST00000607494 FLI1Q01543 452 aaPredicted RBP3.02□□□□□ -1.93
LINC00458-206ENST00000607494 IL15RAQ13261 267 aa3.02□□□□□ -1.93
LINC00458-206ENST00000607494 SPA17Q15506 151 aa3.02□□□□□ -1.93
LINC00458-206ENST00000607494 IGFL1Q6UW32 110 aa3.02□□□□□ -1.93
LINC00458-206ENST00000607494 EIF4E3Q8N5X7 224 aaKnown RBP3.02□□□□□ -1.93
LINC00458-206ENST00000607494 Q8NAQ8 132 aa3.02□□□□□ -1.93
LINC00458-206ENST00000607494 CCL13Q99616 98 aa3.02□□□□□ -1.93
LINC00458-206ENST00000607494 UPK3BQ9BT76 320 aa3.02□□□□□ -1.93
LINC00458-206ENST00000607494 NAV1Q8NEY1 1877 aa3.02□□□□□ -1.93
LINC00458-206ENST00000607494 KIF26AQ9ULI4 1882 aaPredicted RBP3.02□□□□□ -1.93
LINC00458-206ENST00000607494 PLXNB2O15031 1838 aa3.01□□□□□ -1.93
LINC00458-206ENST00000607494 A0A1B0GU33 70 aa3.01□□□□□ -1.93
LINC00458-206ENST00000607494 IGSF23A1L1A6 192 aa3.01□□□□□ -1.93
LINC00458-206ENST00000607494 CRYGDP07320 174 aa3.01□□□□□ -1.93
LINC00458-206ENST00000607494 ARF6P62330 175 aa3.01□□□□□ -1.93
LINC00458-206ENST00000607494 SLC9A3R2Q15599 337 aa3.01□□□□□ -1.93
LINC00458-206ENST00000607494 ACOT6Q3I5F7 207 aaPredicted RBP3.01□□□□□ -1.93
LINC00458-206ENST00000607494 KRTAP25-1Q3LHN0 102 aa3.01□□□□□ -1.93
LINC00458-206ENST00000607494 PRR9Q5T870 116 aa3.01□□□□□ -1.93
LINC00458-206ENST00000607494 AMMECR1LQ6DCA0 310 aa3.01□□□□□ -1.93
LINC00458-206ENST00000607494 SCXQ7RTU7 201 aa3.01□□□□□ -1.93
LINC00458-206ENST00000607494 LHFPL5Q8TAF8 219 aa3.01□□□□□ -1.93
LINC00458-206ENST00000607494 DGCR14Q96DF8 476 aaKnown RBP3.01□□□□□ -1.93
LINC00458-206ENST00000607494 OR52E6Q96RD3 313 aa3.01□□□□□ -1.93
LINC00458-206ENST00000607494 ABCG5Q9H222 651 aa3.01□□□□□ -1.93
LINC00458-206ENST00000607494 ASF1BQ9NVP2 202 aa3.01□□□□□ -1.93
LINC00458-206ENST00000607494 GLTPQ9NZD2 209 aa3.01□□□□□ -1.93
LINC00458-206ENST00000607494 R4GN34 69 aa3.01□□□□□ -1.93
LINC00458-206ENST00000607494 PTPRFP10586 1907 aa3.01□□□□□ -1.93
LINC00458-206ENST00000607494 IGHV1-69-2A0A0G2JMI3 117 aa3□□□□□ -1.93
LINC00458-206ENST00000607494 ESDP10768 282 aa3□□□□□ -1.93
LINC00458-206ENST00000607494 NPPCP23582 126 aa3□□□□□ -1.93
LINC00458-206ENST00000607494 TSPEAR-AS2P59090 65 aa3□□□□□ -1.93
LINC00458-206ENST00000607494 FKBP1AP62942 108 aaKnown RBP3□□□□□ -1.93
LINC00458-206ENST00000607494 EDDM3AQ14507 147 aa3□□□□□ -1.93
LINC00458-206ENST00000607494 SDIM1Q6ZPB5 146 aa3□□□□□ -1.93
LINC00458-206ENST00000607494 UMODL1-AS1Q8N2C9 162 aa3□□□□□ -1.93
LINC00458-206ENST00000607494 GNPNAT1Q96EK6 184 aaPredicted RBP3□□□□□ -1.93
LINC00458-206ENST00000607494 C11orf1Q9H5F2 150 aa3□□□□□ -1.93
LINC00458-206ENST00000607494 COQ4Q9Y3A0 265 aa3□□□□□ -1.93
LINC00458-206ENST00000607494 LAMA3Q16787 3333 aa3□□□□□ -1.93
LINC00458-206ENST00000607494 LTBP2Q14767 1821 aa3□□□□□ -1.93
LINC00458-206ENST00000607494 PHIPQ8WWQ0 1821 aa3□□□□□ -1.93
LINC00458-206ENST00000607494 MAST2Q6P0Q8 1798 aa3□□□□□ -1.93
LINC00458-206ENST00000607494 UNC80Q8N2C7 3258 aa2.99□□□□□ -1.93
LINC00458-206ENST00000607494 SLC17A3O00476 420 aa2.99□□□□□ -1.93
LINC00458-206ENST00000607494 CPSF4O95639 269 aaKnown RBP2.99□□□□□ -1.93
LINC00458-206ENST00000607494 FABP9Q0Z7S8 132 aa2.99□□□□□ -1.93
LINC00458-206ENST00000607494 RASL11AQ6T310 242 aa2.99□□□□□ -1.93
LINC00458-206ENST00000607494 CCDC121Q6ZUS5 278 aa2.99□□□□□ -1.93
LINC00458-206ENST00000607494 LYPD6Q86Y78 171 aa2.99□□□□□ -1.93
LINC00458-206ENST00000607494 KRT222Q8N1A0 295 aa2.99□□□□□ -1.93
LINC00458-206ENST00000607494 OR4K13Q8NH42 304 aa2.99□□□□□ -1.93
LINC00458-206ENST00000607494 MUC7Q8TAX7 377 aa2.99□□□□□ -1.93
LINC00458-206ENST00000607494 C12orf43Q96C57 262 aaKnown RBP2.99□□□□□ -1.93
LINC00458-206ENST00000607494 DCUN1D1Q96GG9 259 aa2.99□□□□□ -1.93
LINC00458-206ENST00000607494 FAM96AQ9H5X1 160 aa2.99□□□□□ -1.93
LINC00458-206ENST00000607494 CXorf21Q9HAI6 301 aa2.99□□□□□ -1.93
LINC00458-206ENST00000607494 VPREB3Q9UKI3 123 aa2.99□□□□□ -1.93
LINC00458-206ENST00000607494 FBXO5Q9UKT4 447 aa2.99□□□□□ -1.93
LINC00458-206ENST00000607494 SNX12Q9UMY4 172 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms