RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 NXNL2Q5VZ03 156 aa3.26□□□□□ -1.89
LINC00397-202ENST00000606785 GLT8D1Q68CQ7 371 aa3.26□□□□□ -1.89
LINC00397-202ENST00000606785 OR10K2Q6IF99 312 aa3.26□□□□□ -1.89
LINC00397-202ENST00000606785 GKN2Q86XP6 184 aa3.26□□□□□ -1.89
LINC00397-202ENST00000606785 HIST3H2BBQ8N257 126 aa3.26□□□□□ -1.89
LINC00397-202ENST00000606785 GAPTQ8N292 157 aa3.26□□□□□ -1.89
LINC00397-202ENST00000606785 KRTCAP2Q8N6L1 136 aa3.26□□□□□ -1.89
LINC00397-202ENST00000606785 C5orf17Q8NAS9 161 aa3.26□□□□□ -1.89
LINC00397-202ENST00000606785 THEM6Q8WUY1 208 aa3.26□□□□□ -1.89
LINC00397-202ENST00000606785 BORCS7Q96B45 105 aa3.26□□□□□ -1.89
LINC00397-202ENST00000606785 DDIT4LQ96D03 193 aa3.26□□□□□ -1.89
LINC00397-202ENST00000606785 OR2D2Q9H210 308 aa3.26□□□□□ -1.89
LINC00397-202ENST00000606785 SH3BGRL3Q9H299 93 aa3.26□□□□□ -1.89
LINC00397-202ENST00000606785 HES4Q9HCC6 221 aa3.26□□□□□ -1.89
LINC00397-202ENST00000606785 OR5AC2Q9NZP5 309 aa3.26□□□□□ -1.89
LINC00397-202ENST00000606785 BTRCQ9Y297 605 aa3.26□□□□□ -1.89
LINC00397-202ENST00000606785 HDGFL3Q9Y3E1 203 aa3.26□□□□□ -1.89
LINC00397-202ENST00000606785 MYOM2P54296 1465 aa3.26□□□□□ -1.89
LINC00397-202ENST00000606785 BCL9LQ86UU0 1499 aa3.26□□□□□ -1.89
LINC00397-202ENST00000606785 NOTCH3Q9UM47 2321 aa3.26□□□□□ -1.89
LINC00397-202ENST00000606785 TMEM131Q92545 1883 aa3.26□□□□□ -1.89
LINC00397-202ENST00000606785 SYCP2Q9BX26 1530 aa3.25□□□□□ -1.89
LINC00397-202ENST00000606785 SIGLEC1Q9BZZ2 1709 aa3.25□□□□□ -1.89
LINC00397-202ENST00000606785 MYH7BA7E2Y1 1941 aa3.25□□□□□ -1.89
LINC00397-202ENST00000606785 TSPOAP1O95153 1857 aa3.25□□□□□ -1.89
LINC00397-202ENST00000606785 ZNF106Q9H2Y7 1883 aaKnown RBP3.25□□□□□ -1.89
LINC00397-202ENST00000606785 ITSN2Q9NZM3 1697 aa3.25□□□□□ -1.89
LINC00397-202ENST00000606785 CDK12Q9NYV4 1490 aaPredicted RBP3.25□□□□□ -1.89
LINC00397-202ENST00000606785 LOC102724200A0A096LPH7 203 aaPredicted RBP3.25□□□□□ -1.89
LINC00397-202ENST00000606785 IGHV7-4-1A0A0J9YVY3 117 aa3.25□□□□□ -1.89
LINC00397-202ENST00000606785 LOC100130705A0A1B0GUX0 176 aa3.25□□□□□ -1.89
LINC00397-202ENST00000606785 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.25□□□□□ -1.89
LINC00397-202ENST00000606785 IGLV2-8P01709 118 aa3.25□□□□□ -1.89
LINC00397-202ENST00000606785 HLA-DQA1P01909 254 aa3.25□□□□□ -1.89
LINC00397-202ENST00000606785 RPL7P18124 248 aaKnown RBP3.25□□□□□ -1.89
LINC00397-202ENST00000606785 BLVRBP30043 206 aaPredicted RBP3.25□□□□□ -1.89
LINC00397-202ENST00000606785 PRSS3P35030 304 aa3.25□□□□□ -1.89
LINC00397-202ENST00000606785 G6PCP35575 357 aa3.25□□□□□ -1.89
LINC00397-202ENST00000606785 MEF2BQ02080 365 aaPredicted RBP3.25□□□□□ -1.89
LINC00397-202ENST00000606785 CLEC12BQ2HXU8 276 aa3.25□□□□□ -1.89
LINC00397-202ENST00000606785 KHDC3LQ587J8 217 aa3.25□□□□□ -1.89
LINC00397-202ENST00000606785 RNASE13Q5GAN3 156 aaKnown RBP3.25□□□□□ -1.89
LINC00397-202ENST00000606785 GUSBP11Q6P575 273 aa3.25□□□□□ -1.89
LINC00397-202ENST00000606785 IGFL2Q6UWQ7 119 aa3.25□□□□□ -1.89
LINC00397-202ENST00000606785 Q6ZR03 302 aa3.25□□□□□ -1.89
LINC00397-202ENST00000606785 NEGR1Q7Z3B1 354 aa3.25□□□□□ -1.89
LINC00397-202ENST00000606785 TMEM256Q8N2U0 113 aa3.25□□□□□ -1.89
LINC00397-202ENST00000606785 Q8N7P7 452 aa3.25□□□□□ -1.89
LINC00397-202ENST00000606785 OR10G2Q8NGC3 310 aa3.25□□□□□ -1.89
LINC00397-202ENST00000606785 OR51A2Q8NGJ7 313 aa3.25□□□□□ -1.89
LINC00397-202ENST00000606785 OR1L1Q8NH94 360 aa3.25□□□□□ -1.89
LINC00397-202ENST00000606785 PP6455Q8WZ26 134 aa3.25□□□□□ -1.89
LINC00397-202ENST00000606785 LINC00477Q96M19 166 aa3.25□□□□□ -1.89
LINC00397-202ENST00000606785 TSPAN32Q96QS1 320 aa3.25□□□□□ -1.89
LINC00397-202ENST00000606785 SEC11CQ9BY50 192 aa3.25□□□□□ -1.89
LINC00397-202ENST00000606785 ACER3Q9NUN7 267 aa3.25□□□□□ -1.89
LINC00397-202ENST00000606785 PTPRFP10586 1907 aa3.25□□□□□ -1.89
LINC00397-202ENST00000606785 TCHHQ07283 1943 aa3.25□□□□□ -1.89
LINC00397-202ENST00000606785 ARAP3Q8WWN8 1544 aa3.24□□□□□ -1.89
LINC00397-202ENST00000606785 OBSCNQ5VST9 7968 aa3.24□□□□□ -1.89
LINC00397-202ENST00000606785 XIRP1Q702N8 1843 aaKnown RBP3.24□□□□□ -1.89
LINC00397-202ENST00000606785 PZPP20742 1482 aa3.24□□□□□ -1.89
LINC00397-202ENST00000606785 RPRD2Q5VT52 1461 aaKnown RBP3.24□□□□□ -1.89
LINC00397-202ENST00000606785 A0A0G2JMM0 328 aa3.24□□□□□ -1.89
LINC00397-202ENST00000606785 A0A1B0GVY2 172 aa3.24□□□□□ -1.89
LINC00397-202ENST00000606785 A0A1W2PPB8 328 aa3.24□□□□□ -1.89
LINC00397-202ENST00000606785 KIR3DP1A8MWS1 328 aa3.24□□□□□ -1.89
LINC00397-202ENST00000606785 C9JAW5 83 aa3.24□□□□□ -1.89
LINC00397-202ENST00000606785 DHRS3O75911 302 aa3.24□□□□□ -1.89
LINC00397-202ENST00000606785 AKAIN1P0CW23 69 aa3.24□□□□□ -1.89
LINC00397-202ENST00000606785 OR12D1P0DN82 309 aa3.24□□□□□ -1.89
LINC00397-202ENST00000606785 CD99P14209 185 aa3.24□□□□□ -1.89
LINC00397-202ENST00000606785 CSRP1P21291 193 aaKnown RBP3.24□□□□□ -1.89
LINC00397-202ENST00000606785 REG1BP48304 166 aa3.24□□□□□ -1.89
LINC00397-202ENST00000606785 UBA52P62987 128 aaKnown RBP3.24□□□□□ -1.89
LINC00397-202ENST00000606785 BTG2P78543 158 aa3.24□□□□□ -1.89
LINC00397-202ENST00000606785 PAFAH1B3Q15102 231 aaKnown RBP3.24□□□□□ -1.89
LINC00397-202ENST00000606785 TMEM244Q5VVB8 128 aa3.24□□□□□ -1.89
LINC00397-202ENST00000606785 SPATA31B1PQ5VZV4 182 aa3.24□□□□□ -1.89
LINC00397-202ENST00000606785 GLIPR1L1Q6UWM5 242 aa3.24□□□□□ -1.89
LINC00397-202ENST00000606785 GOLT1AQ6ZVE7 132 aa3.24□□□□□ -1.89
LINC00397-202ENST00000606785 SLC35G3Q8N808 338 aa3.24□□□□□ -1.89
LINC00397-202ENST00000606785 PLPP5Q8NEB5 264 aa3.24□□□□□ -1.89
LINC00397-202ENST00000606785 OR4K17Q8NGC6 315 aa3.24□□□□□ -1.89
LINC00397-202ENST00000606785 BLNKQ8WV28 456 aa3.24□□□□□ -1.89
LINC00397-202ENST00000606785 PPCDCQ96CD2 204 aa3.24□□□□□ -1.89
LINC00397-202ENST00000606785 ZMYND19Q96E35 227 aaPredicted RBP3.24□□□□□ -1.89
LINC00397-202ENST00000606785 METTL26Q96S19 204 aa3.24□□□□□ -1.89
LINC00397-202ENST00000606785 LYSMD1Q96S90 227 aa3.24□□□□□ -1.89
LINC00397-202ENST00000606785 DERL1Q9BUN8 251 aa3.24□□□□□ -1.89
LINC00397-202ENST00000606785 ZNF471Q9BX82 626 aaPredicted RBP3.24□□□□□ -1.89
LINC00397-202ENST00000606785 KRTAP4-3Q9BYR4 195 aa3.24□□□□□ -1.89
LINC00397-202ENST00000606785 MED28Q9H204 178 aa3.24□□□□□ -1.89
LINC00397-202ENST00000606785 FBXL15Q9H469 300 aa3.24□□□□□ -1.89
LINC00397-202ENST00000606785 VSIRQ9H7M9 311 aa3.24□□□□□ -1.89
LINC00397-202ENST00000606785 PLEKHF2Q9H8W4 249 aa3.24□□□□□ -1.89
LINC00397-202ENST00000606785 ZNF586Q9NXT0 402 aa3.24□□□□□ -1.89
LINC00397-202ENST00000606785 BET1LQ9NYM9 111 aa3.24□□□□□ -1.89
LINC00397-202ENST00000606785 COMMD9Q9P000 198 aa3.24□□□□□ -1.89
LINC00397-202ENST00000606785 HIGD1AQ9Y241 93 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms