RNA–Protein interactions for RNA: ENST00000602088.7

SSBP4-213, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-213ENST00000602088 OR1L8Q8NGR8 309 aa12.85□□□□□ -0.35
SSBP4-213ENST00000602088 TP53RKQ96S44 253 aa12.85□□□□□ -0.35
SSBP4-213ENST00000602088 TSC22D3Q99576 134 aa12.85□□□□□ -0.35
SSBP4-213ENST00000602088 PRRT1Q99946 306 aa12.85□□□□□ -0.35
SSBP4-213ENST00000602088 ZMAT5Q9UDW3 170 aaKnown RBP12.85□□□□□ -0.35
SSBP4-213ENST00000602088 TRBV12-3P01733 135 aa12.84□□□□□ -0.35
SSBP4-213ENST00000602088 EXOSC2Q13868 293 aaKnown RBP12.84□□□□□ -0.35
SSBP4-213ENST00000602088 ZNF79Q15937 498 aa12.84□□□□□ -0.35
SSBP4-213ENST00000602088 C15orf32Q32M92 178 aa12.84□□□□□ -0.35
SSBP4-213ENST00000602088 PYDC2Q56P42 97 aa12.84□□□□□ -0.35
SSBP4-213ENST00000602088 THOC7Q6I9Y2 204 aaKnown RBP12.84□□□□□ -0.35
SSBP4-213ENST00000602088 ACSM6Q6P461 480 aa12.84□□□□□ -0.35
SSBP4-213ENST00000602088 ZNF429Q86V71 674 aa12.84□□□□□ -0.35
SSBP4-213ENST00000602088 Q8N402 240 aa12.84□□□□□ -0.35
SSBP4-213ENST00000602088 MRAPQ8TCY5 172 aa12.84□□□□□ -0.35
SSBP4-213ENST00000602088 RTBDNQ9BSG5 229 aaPredicted RBP12.84□□□□□ -0.35
SSBP4-213ENST00000602088 NDUFA4L2Q9NRX3 87 aa12.84□□□□□ -0.35
SSBP4-213ENST00000602088 TMEM14BQ9NUH8 114 aa12.84□□□□□ -0.35
SSBP4-213ENST00000602088 SLC2A8Q9NY64 477 aa12.84□□□□□ -0.35
SSBP4-213ENST00000602088 FKBP11Q9NYL4 201 aa12.84□□□□□ -0.35
SSBP4-213ENST00000602088 NDUFA13Q9P0J0 144 aa12.84□□□□□ -0.35
SSBP4-213ENST00000602088 FBXL7Q9UJT9 491 aa12.84□□□□□ -0.35
SSBP4-213ENST00000602088 PRNDQ9UKY0 176 aa12.84□□□□□ -0.35
SSBP4-213ENST00000602088 GPR132Q9UNW8 380 aa12.84□□□□□ -0.35
SSBP4-213ENST00000602088 OR51B2Q9Y5P1 312 aa12.84□□□□□ -0.35
SSBP4-213ENST00000602088 IGLV11-55A0A075B6I3 123 aa12.83□□□□□ -0.36
SSBP4-213ENST00000602088 WI2-2373I1.2A0A1W2PRP0 233 aa12.83□□□□□ -0.36
SSBP4-213ENST00000602088 C15orf61A6NNL5 157 aa12.83□□□□□ -0.36
SSBP4-213ENST00000602088 K7EIL1 84 aa12.83□□□□□ -0.36
SSBP4-213ENST00000602088 NDUFB8O95169 186 aa12.83□□□□□ -0.36
SSBP4-213ENST00000602088 DEFA4P12838 97 aa12.83□□□□□ -0.36
SSBP4-213ENST00000602088 HIST1H1BP16401 226 aaKnown RBP12.83□□□□□ -0.36
SSBP4-213ENST00000602088 ETV6P41212 452 aa12.83□□□□□ -0.36
SSBP4-213ENST00000602088 WT1-ASQ06250 92 aa12.83□□□□□ -0.36
SSBP4-213ENST00000602088 KLF5Q13887 457 aaPredicted RBP12.83□□□□□ -0.36
SSBP4-213ENST00000602088 H2BFWTQ7Z2G1 175 aa12.83□□□□□ -0.36
SSBP4-213ENST00000602088 HSD17B13Q7Z5P4 300 aaPredicted RBP12.83□□□□□ -0.36
SSBP4-213ENST00000602088 TRIM63Q969Q1 353 aa12.83□□□□□ -0.36
SSBP4-213ENST00000602088 C5orf66Q9H5L9 145 aa12.83□□□□□ -0.36
SSBP4-213ENST00000602088 C14orf166Q9Y224 244 aaKnown RBP12.83□□□□□ -0.36
SSBP4-213ENST00000602088 DBX1A6NMT0 343 aa12.82□□□□□ -0.36
SSBP4-213ENST00000602088 B3GALNT1O75752 331 aa12.82□□□□□ -0.36
SSBP4-213ENST00000602088 OR13C7P0DN81 318 aa12.82□□□□□ -0.36
SSBP4-213ENST00000602088 SP6Q3SY56 376 aa12.82□□□□□ -0.36
SSBP4-213ENST00000602088 GDPD1Q8N9F7 314 aa12.82□□□□□ -0.36
SSBP4-213ENST00000602088 OR6Q1Q8NGQ2 317 aa12.82□□□□□ -0.36
SSBP4-213ENST00000602088 OR5B3Q8NH48 314 aa12.82□□□□□ -0.36
SSBP4-213ENST00000602088 HINT2Q9BX68 163 aa12.82□□□□□ -0.36
SSBP4-213ENST00000602088 SCP2D1Q9UJQ7 156 aa12.82□□□□□ -0.36
SSBP4-213ENST00000602088 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.81□□□□□ -0.36
SSBP4-213ENST00000602088 BMPR1BO00238 502 aa12.81□□□□□ -0.36
SSBP4-213ENST00000602088 SAP30O75446 220 aa12.81□□□□□ -0.36
SSBP4-213ENST00000602088 IGKV1-5P01602 117 aa12.81□□□□□ -0.36
SSBP4-213ENST00000602088 P0C879 139 aa12.81□□□□□ -0.36
SSBP4-213ENST00000602088 UCP1P25874 307 aa12.81□□□□□ -0.36
SSBP4-213ENST00000602088 KLF9Q13886 244 aaPredicted RBP12.81□□□□□ -0.36
SSBP4-213ENST00000602088 FAM209BQ5JX69 171 aa12.81□□□□□ -0.36
SSBP4-213ENST00000602088 SPANXN2Q5MJ10 180 aa12.81□□□□□ -0.36
SSBP4-213ENST00000602088 OR4A16Q8NH70 328 aa12.81□□□□□ -0.36
SSBP4-213ENST00000602088 LSM10Q969L4 123 aaKnown RBP12.81□□□□□ -0.36
SSBP4-213ENST00000602088 MCUBQ9NWR8 336 aa12.81□□□□□ -0.36
SSBP4-213ENST00000602088 DMRT1Q9Y5R6 373 aa12.81□□□□□ -0.36
SSBP4-213ENST00000602088 TEX13DA0A0J9YY54 714 aaPredicted RBP12.8□□□□□ -0.36
SSBP4-213ENST00000602088 ATG12O94817 140 aa12.8□□□□□ -0.36
SSBP4-213ENST00000602088 SYNJ2BPP57105 145 aa12.8□□□□□ -0.36
SSBP4-213ENST00000602088 AP3S2P59780 193 aa12.8□□□□□ -0.36
SSBP4-213ENST00000602088 RPEL1Q2QD12 228 aa12.8□□□□□ -0.36
SSBP4-213ENST00000602088 TRIM16LQ309B1 348 aa12.8□□□□□ -0.36
SSBP4-213ENST00000602088 TOMM5Q8N4H5 51 aa12.8□□□□□ -0.36
SSBP4-213ENST00000602088 GLYATL2Q8WU03 294 aa12.8□□□□□ -0.36
SSBP4-213ENST00000602088 TMEM56Q96MV1 263 aa12.8□□□□□ -0.36
SSBP4-213ENST00000602088 OR4C12Q96R67 309 aa12.8□□□□□ -0.36
SSBP4-213ENST00000602088 ELOVL1Q9BW60 279 aa12.8□□□□□ -0.36
SSBP4-213ENST00000602088 TMEM222Q9H0R3 208 aa12.8□□□□□ -0.36
SSBP4-213ENST00000602088 NAA60Q9H7X0 242 aa12.8□□□□□ -0.36
SSBP4-213ENST00000602088 CRYM-AS1A6NIL9 109 aa12.79□□□□□ -0.36
SSBP4-213ENST00000602088 CDS2O95674 445 aa12.79□□□□□ -0.36
SSBP4-213ENST00000602088 OR5AC1P0C628 307 aa12.79□□□□□ -0.36
SSBP4-213ENST00000602088 FAUP35544 74 aaKnown RBP12.79□□□□□ -0.36
SSBP4-213ENST00000602088 AKR1C2P52895 323 aa12.79□□□□□ -0.36
SSBP4-213ENST00000602088 HSPE1P61604 102 aaKnown RBP12.79□□□□□ -0.36
SSBP4-213ENST00000602088 TATDN3Q17R31 274 aa12.79□□□□□ -0.36
SSBP4-213ENST00000602088 IZUMO4Q1ZYL8 232 aa12.79□□□□□ -0.36
SSBP4-213ENST00000602088 OR9G4Q8NGQ1 327 aa12.79□□□□□ -0.36
SSBP4-213ENST00000602088 DEDD2Q8WXF8 326 aa12.79□□□□□ -0.36
SSBP4-213ENST00000602088 CCDC140Q96MF4 163 aa12.79□□□□□ -0.36
SSBP4-213ENST00000602088 SCGB3A2Q96PL1 93 aa12.79□□□□□ -0.36
SSBP4-213ENST00000602088 S4R3C0 116 aa12.79□□□□□ -0.36
SSBP4-213ENST00000602088 A0A0B4J293 547 aa12.78□□□□□ -0.36
SSBP4-213ENST00000602088 MFSD2BA6NFX1 497 aa12.78□□□□□ -0.36
SSBP4-213ENST00000602088 PPP5D1E7EU14 171 aa12.78□□□□□ -0.36
SSBP4-213ENST00000602088 IGHV3-23P01764 117 aa12.78□□□□□ -0.36
SSBP4-213ENST00000602088 DEFB121Q5J5C9 76 aa12.78□□□□□ -0.36
SSBP4-213ENST00000602088 IL34Q6ZMJ4 242 aa12.78□□□□□ -0.36
SSBP4-213ENST00000602088 TMEM230Q96A57 120 aa12.78□□□□□ -0.36
SSBP4-213ENST00000602088 EEF1AKMT3Q96AZ1 226 aa12.78□□□□□ -0.36
SSBP4-213ENST00000602088 CXorf58Q96LI9 332 aa12.78□□□□□ -0.36
SSBP4-213ENST00000602088 SRRQ9GZT4 340 aa12.78□□□□□ -0.36
SSBP4-213ENST00000602088 THYN1Q9P016 225 aa12.78□□□□□ -0.36
SSBP4-213ENST00000602088 ZNF256Q9Y2P7 627 aaPredicted RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms