RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 CSN3P07498 182 aa17.22■□□□□ 0.35
CCDC9-204ENST00000599398 OR13C7P0DN81 318 aa17.22■□□□□ 0.35
CCDC9-204ENST00000599398 ARL3P36405 182 aa17.22■□□□□ 0.35
CCDC9-204ENST00000599398 MRPS10P82664 201 aaKnown RBP17.22■□□□□ 0.35
CCDC9-204ENST00000599398 SCGB2B2Q4G0G5 96 aa17.22■□□□□ 0.35
CCDC9-204ENST00000599398 LHFPL1Q86WI0 220 aa17.22■□□□□ 0.35
CCDC9-204ENST00000599398 ISOC1Q96CN7 298 aa17.22■□□□□ 0.35
CCDC9-204ENST00000599398 CCDC140Q96MF4 163 aa17.22■□□□□ 0.35
CCDC9-204ENST00000599398 TSC22D3Q99576 134 aa17.22■□□□□ 0.35
CCDC9-204ENST00000599398 ASCL2Q99929 193 aa17.22■□□□□ 0.35
CCDC9-204ENST00000599398 PRNDQ9UKY0 176 aa17.22■□□□□ 0.35
CCDC9-204ENST00000599398 CYB5BO43169 146 aa17.21■□□□□ 0.35
CCDC9-204ENST00000599398 OR2C1O95371 312 aa17.21■□□□□ 0.35
CCDC9-204ENST00000599398 CD74P04233 296 aa17.21■□□□□ 0.35
CCDC9-204ENST00000599398 SERPINE2P07093 398 aa17.21■□□□□ 0.35
CCDC9-204ENST00000599398 PIGPP57054 158 aa17.21■□□□□ 0.35
CCDC9-204ENST00000599398 KLK9Q2XQG4 91 aa17.21■□□□□ 0.35
CCDC9-204ENST00000599398 STEAP1BQ6NZ63 245 aa17.21■□□□□ 0.35
CCDC9-204ENST00000599398 H2BFWTQ7Z2G1 175 aa17.21■□□□□ 0.35
CCDC9-204ENST00000599398 HSD17B13Q7Z5P4 300 aaPredicted RBP17.21■□□□□ 0.35
CCDC9-204ENST00000599398 CADM3Q8N126 398 aa17.21■□□□□ 0.35
CCDC9-204ENST00000599398 ZNF486Q96H40 463 aaPredicted RBP17.21■□□□□ 0.35
CCDC9-204ENST00000599398 CXorf58Q96LI9 332 aa17.21■□□□□ 0.35
CCDC9-204ENST00000599398 NDUFA4L2Q9NRX3 87 aa17.21■□□□□ 0.35
CCDC9-204ENST00000599398 FKBP11Q9NYL4 201 aa17.21■□□□□ 0.35
CCDC9-204ENST00000599398 THYN1Q9P016 225 aa17.21■□□□□ 0.35
CCDC9-204ENST00000599398 KLK9Q9UKQ9 250 aa17.21■□□□□ 0.35
CCDC9-204ENST00000599398 MFSD2BA6NFX1 497 aa17.2■□□□□ 0.34
CCDC9-204ENST00000599398 H0Y980 276 aa17.2■□□□□ 0.34
CCDC9-204ENST00000599398 MECP2P51608 486 aaKnown RBP17.2■□□□□ 0.34
CCDC9-204ENST00000599398 RND3P61587 244 aa17.2■□□□□ 0.34
CCDC9-204ENST00000599398 SSBP1Q04837 148 aaKnown RBP17.2■□□□□ 0.34
CCDC9-204ENST00000599398 WT1-ASQ06250 92 aa17.2■□□□□ 0.34
CCDC9-204ENST00000599398 GDPD1Q8N9F7 314 aa17.2■□□□□ 0.34
CCDC9-204ENST00000599398 SMIM4Q8WVI0 70 aa17.2■□□□□ 0.34
CCDC9-204ENST00000599398 LSM10Q969L4 123 aaKnown RBP17.2■□□□□ 0.34
CCDC9-204ENST00000599398 MRGPRFQ96AM1 343 aa17.2■□□□□ 0.34
CCDC9-204ENST00000599398 SEC22AQ96IW7 307 aa17.2■□□□□ 0.34
CCDC9-204ENST00000599398 DMRT1Q9Y5R6 373 aa17.2■□□□□ 0.34
CCDC9-204ENST00000599398 TRBV7-1A0A0A6YYK4 115 aa17.19■□□□□ 0.34
CCDC9-204ENST00000599398 IGKV1-39P01597 117 aa17.19■□□□□ 0.34
CCDC9-204ENST00000599398 IGKV1D-39P04432 117 aa17.19■□□□□ 0.34
CCDC9-204ENST00000599398 NHLRC4P0CG21 123 aaPredicted RBP17.19■□□□□ 0.34
CCDC9-204ENST00000599398 PTBP1P26599 531 aaKnown RBP eCLIP17.19■□□□□ 0.34
CCDC9-204ENST00000599398 SLC25A24Q6NUK1 477 aa17.19■□□□□ 0.34
CCDC9-204ENST00000599398 OR5B3Q8NH48 314 aa17.19■□□□□ 0.34
CCDC9-204ENST00000599398 OR4A16Q8NH70 328 aa17.19■□□□□ 0.34
CCDC9-204ENST00000599398 TERB2Q8NHR7 220 aa17.19■□□□□ 0.34
CCDC9-204ENST00000599398 ZFAND1Q8TCF1 268 aa17.19■□□□□ 0.34
CCDC9-204ENST00000599398 SIGLEC8Q9NYZ4 499 aa17.19■□□□□ 0.34
CCDC9-204ENST00000599398 COPZ2Q9P299 210 aa17.19■□□□□ 0.34
CCDC9-204ENST00000599398 C15orf61A6NNL5 157 aa17.18■□□□□ 0.34
CCDC9-204ENST00000599398 LCN12Q6JVE5 192 aa17.18■□□□□ 0.34
CCDC9-204ENST00000599398 FAAP20Q6NZ36 180 aa17.18■□□□□ 0.34
CCDC9-204ENST00000599398 TMEM56Q96MV1 263 aa17.18■□□□□ 0.34
CCDC9-204ENST00000599398 SLIRPQ9GZT3 109 aaKnown RBP17.18■□□□□ 0.34
CCDC9-204ENST00000599398 ZC4H2Q9NQZ6 224 aa17.18■□□□□ 0.34
CCDC9-204ENST00000599398 TMEM14BQ9NUH8 114 aa17.18■□□□□ 0.34
CCDC9-204ENST00000599398 RABL2AQ9UBK7 228 aaPredicted RBP17.18■□□□□ 0.34
CCDC9-204ENST00000599398 RABL2BQ9UNT1 228 aa17.18■□□□□ 0.34
CCDC9-204ENST00000599398 CCDC160A6NGH7 325 aa17.17■□□□□ 0.34
CCDC9-204ENST00000599398 DBX1A6NMT0 343 aa17.17■□□□□ 0.34
CCDC9-204ENST00000599398 CLEC3BP05452 202 aa17.17■□□□□ 0.34
CCDC9-204ENST00000599398 MEF2DQ14814 521 aa17.17■□□□□ 0.34
CCDC9-204ENST00000599398 Q8N402 240 aa17.17■□□□□ 0.34
CCDC9-204ENST00000599398 CCDC71LQ8N9Z2 235 aa17.17■□□□□ 0.34
CCDC9-204ENST00000599398 OR13C8Q8NGS7 320 aa17.17■□□□□ 0.34
CCDC9-204ENST00000599398 MARCH1Q8TCQ1 289 aa17.17■□□□□ 0.34
CCDC9-204ENST00000599398 DYNLRB2Q8TF09 96 aa17.17■□□□□ 0.34
CCDC9-204ENST00000599398 ZNF320A2RRD8 509 aa17.16■□□□□ 0.34
CCDC9-204ENST00000599398 DISC1C4P0D8 188 aa17.16■□□□□ 0.34
CCDC9-204ENST00000599398 CTDSPLO15194 276 aa17.16■□□□□ 0.34
CCDC9-204ENST00000599398 GPR183P32249 361 aa17.16■□□□□ 0.34
CCDC9-204ENST00000599398 FAM106AQ4KMX7 169 aa17.16■□□□□ 0.34
CCDC9-204ENST00000599398 GPHB5Q86YW7 130 aa17.16■□□□□ 0.34
CCDC9-204ENST00000599398 MCFD2Q8NI22 146 aa17.16■□□□□ 0.34
CCDC9-204ENST00000599398 ZNF502Q8TBZ5 544 aa17.16■□□□□ 0.34
CCDC9-204ENST00000599398 TP53RKQ96S44 253 aa17.16■□□□□ 0.34
CCDC9-204ENST00000599398 F11RQ9Y624 299 aaKnown RBP17.16■□□□□ 0.34
CCDC9-204ENST00000599398 CEPT1Q9Y6K0 416 aa17.16■□□□□ 0.34
CCDC9-204ENST00000599398 C3orf85A0A1B0GTC6 90 aa17.15■□□□□ 0.34
CCDC9-204ENST00000599398 LGALS9O00182 355 aa17.15■□□□□ 0.34
CCDC9-204ENST00000599398 FRMD6-AS1P0C7T7 363 aa17.15■□□□□ 0.34
CCDC9-204ENST00000599398 AKAIN1P0CW23 69 aa17.15■□□□□ 0.34
CCDC9-204ENST00000599398 AKR1C2P52895 323 aa17.15■□□□□ 0.34
CCDC9-204ENST00000599398 RSL24D1Q9UHA3 163 aaKnown RBP17.15■□□□□ 0.34
CCDC9-204ENST00000599398 IZUMO1RA6ND01 250 aa17.14■□□□□ 0.33
CCDC9-204ENST00000599398 C2orf70A6NJV1 201 aa17.14■□□□□ 0.33
CCDC9-204ENST00000599398 CTSDP07339 412 aaPredicted RBP17.14■□□□□ 0.33
CCDC9-204ENST00000599398 TNFSF8P32971 234 aa17.14■□□□□ 0.33
CCDC9-204ENST00000599398 TRIM16LQ309B1 348 aa17.14■□□□□ 0.33
CCDC9-204ENST00000599398 SP6Q3SY56 376 aa17.14■□□□□ 0.33
CCDC9-204ENST00000599398 ADAMTSL5Q6ZMM2 481 aa17.14■□□□□ 0.33
CCDC9-204ENST00000599398 GTSCR1Q86UQ5 136 aa17.14■□□□□ 0.33
CCDC9-204ENST00000599398 SGPP2Q8IWX5 399 aa17.14■□□□□ 0.33
CCDC9-204ENST00000599398 OR4C16Q8NGL9 310 aa17.14■□□□□ 0.33
CCDC9-204ENST00000599398 VN1R17PQ8TDU5 208 aa17.14■□□□□ 0.33
CCDC9-204ENST00000599398 C14orf166Q9Y224 244 aaKnown RBP17.14■□□□□ 0.33
CCDC9-204ENST00000599398 U3KQK5 164 aa17.14■□□□□ 0.33
CCDC9-204ENST00000599398 IGHV3-21A0A0B4J1V1 117 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms