RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 IGHV3-23P01764 117 aa14.08□□□□□ -0.16
SHKBP1-202ENST00000593764 TRAPPC2P0DI81 140 aa14.08□□□□□ -0.16
SHKBP1-202ENST00000593764 TRAPPC2BP0DI82 140 aa14.08□□□□□ -0.16
SHKBP1-202ENST00000593764 DEFA4P12838 97 aa14.08□□□□□ -0.16
SHKBP1-202ENST00000593764 GP9P14770 177 aa14.08□□□□□ -0.16
SHKBP1-202ENST00000593764 PGAM2P15259 253 aa14.08□□□□□ -0.16
SHKBP1-202ENST00000593764 HIST1H1BP16401 226 aaKnown RBP14.08□□□□□ -0.16
SHKBP1-202ENST00000593764 WT1-ASQ06250 92 aa14.08□□□□□ -0.16
SHKBP1-202ENST00000593764 TATDN3Q17R31 274 aa14.08□□□□□ -0.16
SHKBP1-202ENST00000593764 MRGPRFQ96AM1 343 aa14.08□□□□□ -0.16
SHKBP1-202ENST00000593764 ZNF486Q96H40 463 aaPredicted RBP14.08□□□□□ -0.16
SHKBP1-202ENST00000593764 SOSTQ9BQB4 213 aa14.08□□□□□ -0.16
SHKBP1-202ENST00000593764 C6orf62Q9GZU0 229 aaPredicted RBP14.08□□□□□ -0.16
SHKBP1-202ENST00000593764 NXF2Q9GZY0 626 aaKnown RBP14.08□□□□□ -0.16
SHKBP1-202ENST00000593764 SIGLEC8Q9NYZ4 499 aa14.08□□□□□ -0.16
SHKBP1-202ENST00000593764 OR51B2Q9Y5P1 312 aa14.08□□□□□ -0.16
SHKBP1-202ENST00000593764 NOL3O60936 208 aaKnown RBP14.07□□□□□ -0.16
SHKBP1-202ENST00000593764 SNAPC5O75971 98 aa14.07□□□□□ -0.16
SHKBP1-202ENST00000593764 HLA-AP01891 365 aaKnown RBP14.07□□□□□ -0.16
SHKBP1-202ENST00000593764 SERPINE2P07093 398 aa14.07□□□□□ -0.16
SHKBP1-202ENST00000593764 PIGPP57054 158 aa14.07□□□□□ -0.16
SHKBP1-202ENST00000593764 IL18Q14116 193 aa14.07□□□□□ -0.16
SHKBP1-202ENST00000593764 FAM209BQ5JX69 171 aa14.07□□□□□ -0.16
SHKBP1-202ENST00000593764 THOC7Q6I9Y2 204 aaKnown RBP14.07□□□□□ -0.16
SHKBP1-202ENST00000593764 C11orf87Q6NUJ2 197 aa14.07□□□□□ -0.16
SHKBP1-202ENST00000593764 TMEM14BQ9NUH8 114 aa14.07□□□□□ -0.16
SHKBP1-202ENST00000593764 MFSD2BA6NFX1 497 aa14.06□□□□□ -0.16
SHKBP1-202ENST00000593764 OR2C1O95371 312 aa14.06□□□□□ -0.16
SHKBP1-202ENST00000593764 OR13C7P0DN81 318 aa14.06□□□□□ -0.16
SHKBP1-202ENST00000593764 TNFSF8P32971 234 aa14.06□□□□□ -0.16
SHKBP1-202ENST00000593764 MECP2P51608 486 aaKnown RBP14.06□□□□□ -0.16
SHKBP1-202ENST00000593764 PPP5CP53041 499 aa14.06□□□□□ -0.16
SHKBP1-202ENST00000593764 FAAP20Q6NZ36 180 aa14.06□□□□□ -0.16
SHKBP1-202ENST00000593764 CLEC19AQ6UXS0 136 aa14.06□□□□□ -0.16
SHKBP1-202ENST00000593764 ADAMTSL5Q6ZMM2 481 aa14.06□□□□□ -0.16
SHKBP1-202ENST00000593764 TP53RKQ96S44 253 aa14.06□□□□□ -0.16
SHKBP1-202ENST00000593764 RABL2AQ9UBK7 228 aaPredicted RBP14.06□□□□□ -0.16
SHKBP1-202ENST00000593764 PRNDQ9UKY0 176 aa14.06□□□□□ -0.16
SHKBP1-202ENST00000593764 RABL2BQ9UNT1 228 aa14.06□□□□□ -0.16
SHKBP1-202ENST00000593764 C15orf61A6NNL5 157 aa14.05□□□□□ -0.16
SHKBP1-202ENST00000593764 GGCTO75223 188 aaKnown RBP14.05□□□□□ -0.16
SHKBP1-202ENST00000593764 MFAP2P55001 183 aa14.05□□□□□ -0.16
SHKBP1-202ENST00000593764 SCGB2B2Q4G0G5 96 aa14.05□□□□□ -0.16
SHKBP1-202ENST00000593764 HSD17B13Q7Z5P4 300 aaPredicted RBP14.05□□□□□ -0.16
SHKBP1-202ENST00000593764 GDPD1Q8N9F7 314 aa14.05□□□□□ -0.16
SHKBP1-202ENST00000593764 OR13C8Q8NGS7 320 aa14.05□□□□□ -0.16
SHKBP1-202ENST00000593764 OR5B3Q8NH48 314 aa14.05□□□□□ -0.16
SHKBP1-202ENST00000593764 MARCH1Q8TCQ1 289 aa14.05□□□□□ -0.16
SHKBP1-202ENST00000593764 EEF1AKMT3Q96AZ1 226 aa14.05□□□□□ -0.16
SHKBP1-202ENST00000593764 TSC22D3Q99576 134 aa14.05□□□□□ -0.16
SHKBP1-202ENST00000593764 FKBP11Q9NYL4 201 aa14.05□□□□□ -0.16
SHKBP1-202ENST00000593764 SMAD5-AS1Q9Y6J3 95 aa14.05□□□□□ -0.16
SHKBP1-202ENST00000593764 TRBV7-1A0A0A6YYK4 115 aa14.04□□□□□ -0.16
SHKBP1-202ENST00000593764 H0Y980 276 aa14.04□□□□□ -0.16
SHKBP1-202ENST00000593764 GSTZ1O43708 216 aaPredicted RBP14.04□□□□□ -0.16
SHKBP1-202ENST00000593764 MEF2DQ14814 521 aa14.04□□□□□ -0.16
SHKBP1-202ENST00000593764 H2BFWTQ7Z2G1 175 aa14.04□□□□□ -0.16
SHKBP1-202ENST00000593764 GPHB5Q86YW7 130 aa14.04□□□□□ -0.16
SHKBP1-202ENST00000593764 MCFD2Q8NI22 146 aa14.04□□□□□ -0.16
SHKBP1-202ENST00000593764 ZFAND1Q8TCF1 268 aa14.04□□□□□ -0.16
SHKBP1-202ENST00000593764 LSM10Q969L4 123 aaKnown RBP14.04□□□□□ -0.16
SHKBP1-202ENST00000593764 CXorf58Q96LI9 332 aa14.04□□□□□ -0.16
SHKBP1-202ENST00000593764 HINT2Q9BX68 163 aa14.04□□□□□ -0.16
SHKBP1-202ENST00000593764 RBM38Q9H0Z9 239 aaKnown RBP14.04□□□□□ -0.16
SHKBP1-202ENST00000593764 PEMTQ9UBM1 199 aa14.04□□□□□ -0.16
SHKBP1-202ENST00000593764 HUWE1Q7Z6Z7 4374 aaKnown RBP14.04□□□□□ -0.16
SHKBP1-202ENST00000593764 C3orf85A0A1B0GTC6 90 aa14.03□□□□□ -0.16
SHKBP1-202ENST00000593764 IGKV1-5P01602 117 aa14.03□□□□□ -0.16
SHKBP1-202ENST00000593764 CLEC3BP05452 202 aa14.03□□□□□ -0.16
SHKBP1-202ENST00000593764 ARL3P36405 182 aa14.03□□□□□ -0.16
SHKBP1-202ENST00000593764 IZUMO4Q1ZYL8 232 aa14.03□□□□□ -0.16
SHKBP1-202ENST00000593764 Q8N1Y9 231 aa14.03□□□□□ -0.16
SHKBP1-202ENST00000593764 OR4C16Q8NGL9 310 aa14.03□□□□□ -0.16
SHKBP1-202ENST00000593764 ZNF502Q8TBZ5 544 aa14.03□□□□□ -0.16
SHKBP1-202ENST00000593764 RTBDNQ9BSG5 229 aaPredicted RBP14.03□□□□□ -0.16
SHKBP1-202ENST00000593764 RSL24D1Q9UHA3 163 aaKnown RBP14.03□□□□□ -0.16
SHKBP1-202ENST00000593764 F11RQ9Y624 299 aaKnown RBP14.03□□□□□ -0.16
SHKBP1-202ENST00000593764 ANKRD20A5PA0PJZ0 165 aa14.02□□□□□ -0.17
SHKBP1-202ENST00000593764 FABP12A6NFH5 140 aa14.02□□□□□ -0.17
SHKBP1-202ENST00000593764 LGALS9O00182 355 aa14.02□□□□□ -0.17
SHKBP1-202ENST00000593764 CTSDP07339 412 aaPredicted RBP14.02□□□□□ -0.17
SHKBP1-202ENST00000593764 P0C879 139 aa14.02□□□□□ -0.17
SHKBP1-202ENST00000593764 AKAIN1P0CW23 69 aa14.02□□□□□ -0.17
SHKBP1-202ENST00000593764 EDN2P20800 178 aa14.02□□□□□ -0.17
SHKBP1-202ENST00000593764 SP6Q3SY56 376 aa14.02□□□□□ -0.17
SHKBP1-202ENST00000593764 SLC25A24Q6NUK1 477 aa14.02□□□□□ -0.17
SHKBP1-202ENST00000593764 OR4A16Q8NH70 328 aa14.02□□□□□ -0.17
SHKBP1-202ENST00000593764 THYN1Q9P016 225 aa14.02□□□□□ -0.17
SHKBP1-202ENST00000593764 COPZ2Q9P299 210 aa14.02□□□□□ -0.17
SHKBP1-202ENST00000593764 IZUMO1RA6ND01 250 aa14.01□□□□□ -0.17
SHKBP1-202ENST00000593764 NHLRC4P0CG21 123 aaPredicted RBP14.01□□□□□ -0.17
SHKBP1-202ENST00000593764 VN1R17PQ8TDU5 208 aa14.01□□□□□ -0.17
SHKBP1-202ENST00000593764 TMEM56Q96MV1 263 aa14.01□□□□□ -0.17
SHKBP1-202ENST00000593764 ASCL2Q99929 193 aa14.01□□□□□ -0.17
SHKBP1-202ENST00000593764 THAP7Q9BT49 309 aaPredicted RBP14.01□□□□□ -0.17
SHKBP1-202ENST00000593764 A0A0B4J293 547 aa14□□□□□ -0.17
SHKBP1-202ENST00000593764 C2orf70A6NJV1 201 aa14□□□□□ -0.17
SHKBP1-202ENST00000593764 DISC1C4P0D8 188 aa14□□□□□ -0.17
SHKBP1-202ENST00000593764 UCP1P25874 307 aa14□□□□□ -0.17
SHKBP1-202ENST00000593764 HSPE1P61604 102 aaKnown RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms