RNA–Protein interactions for RNA: ENST00000592911.5

SMAD4-215, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-215ENST00000592911 RAB22AQ9UL26 194 aa6.33□□□□□ -1.4
SMAD4-215ENST00000592911 RBMX2Q9Y388 322 aaKnown RBP6.33□□□□□ -1.4
SMAD4-215ENST00000592911 A0A1B0GW64 132 aa6.32□□□□□ -1.4
SMAD4-215ENST00000592911 MFSD2BA6NFX1 497 aa6.32□□□□□ -1.4
SMAD4-215ENST00000592911 ARL6IP5O75915 188 aa6.32□□□□□ -1.4
SMAD4-215ENST00000592911 CA1P00915 261 aaPredicted RBP6.32□□□□□ -1.4
SMAD4-215ENST00000592911 IGHV3-23P01764 117 aa6.32□□□□□ -1.4
SMAD4-215ENST00000592911 CTSDP07339 412 aaPredicted RBP6.32□□□□□ -1.4
SMAD4-215ENST00000592911 PSMA1P25786 263 aaKnown RBP6.32□□□□□ -1.4
SMAD4-215ENST00000592911 FAM3BP58499 235 aaPredicted RBP6.32□□□□□ -1.4
SMAD4-215ENST00000592911 RAB11BQ15907 218 aa6.32□□□□□ -1.4
SMAD4-215ENST00000592911 PLAC9Q5JTB6 97 aa6.32□□□□□ -1.4
SMAD4-215ENST00000592911 NANOGP1Q8N7R0 232 aa6.32□□□□□ -1.4
SMAD4-215ENST00000592911 GDPD1Q8N9F7 314 aa6.32□□□□□ -1.4
SMAD4-215ENST00000592911 ZBTB34Q8NCN2 500 aa6.32□□□□□ -1.4
SMAD4-215ENST00000592911 OR5B3Q8NH48 314 aa6.32□□□□□ -1.4
SMAD4-215ENST00000592911 RAB3CQ96E17 227 aa6.32□□□□□ -1.4
SMAD4-215ENST00000592911 OR10C1Q96KK4 312 aa6.32□□□□□ -1.4
SMAD4-215ENST00000592911 NDUFAF3Q9BU61 184 aa6.32□□□□□ -1.4
SMAD4-215ENST00000592911 PLGRKTQ9HBL7 147 aa6.32□□□□□ -1.4
SMAD4-215ENST00000592911 PLCXD1Q9NUJ7 323 aa6.32□□□□□ -1.4
SMAD4-215ENST00000592911 NDUFA13Q9P0J0 144 aa6.32□□□□□ -1.4
SMAD4-215ENST00000592911 SMPXQ9UHP9 88 aa6.32□□□□□ -1.4
SMAD4-215ENST00000592911 OR2W1Q9Y3N9 320 aa6.32□□□□□ -1.4
SMAD4-215ENST00000592911 IGHV7-4-1A0A0J9YVY3 117 aa6.31□□□□□ -1.4
SMAD4-215ENST00000592911 IGLC7A0M8Q6 106 aa6.31□□□□□ -1.4
SMAD4-215ENST00000592911 E7EUB6 86 aa6.31□□□□□ -1.4
SMAD4-215ENST00000592911 MFNGO00587 321 aa6.31□□□□□ -1.4
SMAD4-215ENST00000592911 DENRO43583 198 aaKnown RBP6.31□□□□□ -1.4
SMAD4-215ENST00000592911 ATP6V1G1O75348 118 aa6.31□□□□□ -1.4
SMAD4-215ENST00000592911 S1PR2O95136 353 aa6.31□□□□□ -1.4
SMAD4-215ENST00000592911 CD74P04233 296 aa6.31□□□□□ -1.4
SMAD4-215ENST00000592911 HLA-DMBP28068 263 aa6.31□□□□□ -1.4
SMAD4-215ENST00000592911 TAS2R31P59538 309 aa6.31□□□□□ -1.4
SMAD4-215ENST00000592911 OR2B8PP59922 312 aa6.31□□□□□ -1.4
SMAD4-215ENST00000592911 ARPC4P59998 168 aa6.31□□□□□ -1.4
SMAD4-215ENST00000592911 EIF4EBP1Q13541 118 aaPredicted RBP6.31□□□□□ -1.4
SMAD4-215ENST00000592911 RNF212Q495C1 297 aa6.31□□□□□ -1.4
SMAD4-215ENST00000592911 FAM90A2PQ658T7 463 aa6.31□□□□□ -1.4
SMAD4-215ENST00000592911 Q6ZR54 194 aa6.31□□□□□ -1.4
SMAD4-215ENST00000592911 ZBTB8BQ8NAP8 495 aaPredicted RBP6.31□□□□□ -1.4
SMAD4-215ENST00000592911 DGCR14Q96DF8 476 aaKnown RBP6.31□□□□□ -1.4
SMAD4-215ENST00000592911 TXN2Q99757 166 aa6.31□□□□□ -1.4
SMAD4-215ENST00000592911 MND1Q9BWT6 205 aa6.31□□□□□ -1.4
SMAD4-215ENST00000592911 QTRT1Q9BXR0 403 aaKnown RBP6.31□□□□□ -1.4
SMAD4-215ENST00000592911 COMMD5Q9GZQ3 224 aa6.31□□□□□ -1.4
SMAD4-215ENST00000592911 DCSTAMPQ9H295 470 aa6.31□□□□□ -1.4
SMAD4-215ENST00000592911 KCNK7Q9Y2U2 307 aa6.31□□□□□ -1.4
SMAD4-215ENST00000592911 PNMA8CA0A1B0GUJ8 204 aa6.3□□□□□ -1.4
SMAD4-215ENST00000592911 TEX48A0A1B0GUV7 120 aa6.3□□□□□ -1.4
SMAD4-215ENST00000592911 METTL21EPA6NDL7 271 aa6.3□□□□□ -1.4
SMAD4-215ENST00000592911 CHEK1O14757 476 aa6.3□□□□□ -1.4
SMAD4-215ENST00000592911 IGLV2-14P01704 120 aa6.3□□□□□ -1.4
SMAD4-215ENST00000592911 SERPINE2P07093 398 aa6.3□□□□□ -1.4
SMAD4-215ENST00000592911 HIST1H1DP16402 221 aaKnown RBP6.3□□□□□ -1.4
SMAD4-215ENST00000592911 NPY1RP25929 384 aa6.3□□□□□ -1.4
SMAD4-215ENST00000592911 TALDO1P37837 337 aa6.3□□□□□ -1.4
SMAD4-215ENST00000592911 TIMM50Q3ZCQ8 353 aa6.3□□□□□ -1.4
SMAD4-215ENST00000592911 KCTD21Q4G0X4 260 aa6.3□□□□□ -1.4
SMAD4-215ENST00000592911 Q6ZTC4 211 aa6.3□□□□□ -1.4
SMAD4-215ENST00000592911 SSX9Q7RTT3 188 aa6.3□□□□□ -1.4
SMAD4-215ENST00000592911 APRG1Q8IVJ8 170 aa6.3□□□□□ -1.4
SMAD4-215ENST00000592911 TMEM116Q8NCL8 245 aa6.3□□□□□ -1.4
SMAD4-215ENST00000592911 OR10R2Q8NGX6 335 aa6.3□□□□□ -1.4
SMAD4-215ENST00000592911 GIMAP1Q8WWP7 306 aa6.3□□□□□ -1.4
SMAD4-215ENST00000592911 FAM3DQ96BQ1 224 aa6.3□□□□□ -1.4
SMAD4-215ENST00000592911 RNF2Q99496 336 aa6.3□□□□□ -1.4
SMAD4-215ENST00000592911 KRTAP4-5Q9BYR2 181 aa6.3□□□□□ -1.4
SMAD4-215ENST00000592911 C21orf62Q9NYP8 219 aa6.3□□□□□ -1.4
SMAD4-215ENST00000592911 NACAE9PAV3 2078 aa6.3□□□□□ -1.4
SMAD4-215ENST00000592911 DEFB131BA0A096LNP1 70 aa6.29□□□□□ -1.4
SMAD4-215ENST00000592911 OR2T8A6NH00 312 aa6.29□□□□□ -1.4
SMAD4-215ENST00000592911 CGB1A6NKQ9 187 aa6.29□□□□□ -1.4
SMAD4-215ENST00000592911 NUPL2O15504 423 aaKnown RBP6.29□□□□□ -1.4
SMAD4-215ENST00000592911 PFDN1O60925 122 aa6.29□□□□□ -1.4
SMAD4-215ENST00000592911 SCGNO76038 276 aa6.29□□□□□ -1.4
SMAD4-215ENST00000592911 HPRT1P00492 218 aa6.29□□□□□ -1.4
SMAD4-215ENST00000592911 IFNA21P01568 189 aa6.29□□□□□ -1.4
SMAD4-215ENST00000592911 IFNA17P01571 189 aa6.29□□□□□ -1.4
SMAD4-215ENST00000592911 NQO2P16083 231 aa6.29□□□□□ -1.4
SMAD4-215ENST00000592911 CRHBPP24387 322 aa6.29□□□□□ -1.4
SMAD4-215ENST00000592911 RPL30P62888 115 aaKnown RBP6.29□□□□□ -1.4
SMAD4-215ENST00000592911 CATR1Q13166 79 aa6.29□□□□□ -1.4
SMAD4-215ENST00000592911 CNIH2Q6PI25 160 aa6.29□□□□□ -1.4
SMAD4-215ENST00000592911 ZNF773Q6PK81 442 aa6.29□□□□□ -1.4
SMAD4-215ENST00000592911 STHQ8IWL8 128 aa6.29□□□□□ -1.4
SMAD4-215ENST00000592911 Q8N1X5 172 aa6.29□□□□□ -1.4
SMAD4-215ENST00000592911 PQLC1Q8N2U9 271 aa6.29□□□□□ -1.4
SMAD4-215ENST00000592911 PACRGLQ8N7B6 248 aa6.29□□□□□ -1.4
SMAD4-215ENST00000592911 DUSP18Q8NEJ0 188 aa6.29□□□□□ -1.4
SMAD4-215ENST00000592911 TCTEX1D2Q8WW35 142 aa6.29□□□□□ -1.4
SMAD4-215ENST00000592911 BORCS5Q969J3 196 aa6.29□□□□□ -1.4
SMAD4-215ENST00000592911 GRAMD2BQ96HH9 432 aa6.29□□□□□ -1.4
SMAD4-215ENST00000592911 GINS3Q9BRX5 216 aa6.29□□□□□ -1.4
SMAD4-215ENST00000592911 RHPN1-AS1Q9BWJ2 59 aa6.29□□□□□ -1.4
SMAD4-215ENST00000592911 KCNK15Q9H427 330 aa6.29□□□□□ -1.4
SMAD4-215ENST00000592911 TMEM231Q9H6L2 316 aa6.29□□□□□ -1.4
SMAD4-215ENST00000592911 LRP1BQ9NZR2 4599 aa6.29□□□□□ -1.4
SMAD4-215ENST00000592911 COMMD9Q9P000 198 aa6.29□□□□□ -1.4
SMAD4-215ENST00000592911 PSORS1C1Q9UIG5 152 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 147.1 ms