RNA–Protein interactions for RNA: ENST00000590339.5

VPS25-205, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 668 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-205ENST00000590339 PRCDQ00LT1 54 aa7.58□□□□□ -1.2
VPS25-205ENST00000590339 SRSF2Q01130 221 aaKnown RBP7.58□□□□□ -1.2
VPS25-205ENST00000590339 PAX2Q02962 417 aa7.58□□□□□ -1.2
VPS25-205ENST00000590339 HCP5Q6MZN7 132 aa7.58□□□□□ -1.2
VPS25-205ENST00000590339 CENPVQ7Z7K6 275 aaPredicted RBP7.58□□□□□ -1.2
VPS25-205ENST00000590339 LINC01356Q8N9X3 169 aa7.58□□□□□ -1.2
VPS25-205ENST00000590339 OR11H6Q8NGC7 330 aa7.58□□□□□ -1.2
VPS25-205ENST00000590339 CLDND2Q8NHS1 167 aa7.58□□□□□ -1.2
VPS25-205ENST00000590339 TMEM167AQ8TBQ9 72 aa7.58□□□□□ -1.2
VPS25-205ENST00000590339 TAF15Q92804 592 aaKnown RBP eCLIP7.58□□□□□ -1.2
VPS25-205ENST00000590339 CLCC1Q96S66 551 aa7.58□□□□□ -1.2
VPS25-205ENST00000590339 UNKLQ9H9P5 680 aaKnown RBP7.58□□□□□ -1.2
VPS25-205ENST00000590339 ONECUT1Q9UBC0 465 aa7.58□□□□□ -1.2
VPS25-205ENST00000590339 JMJD1CQ15652 2540 aa7.58□□□□□ -1.2
VPS25-205ENST00000590339 ANK3Q12955 4377 aaKnown RBP7.58□□□□□ -1.2
VPS25-205ENST00000590339 CR1P17927 2039 aa7.57□□□□□ -1.2
VPS25-205ENST00000590339 UBE2L5PA0A1B0GUS4 154 aa7.57□□□□□ -1.2
VPS25-205ENST00000590339 A0A1W2PPI3 338 aa7.57□□□□□ -1.2
VPS25-205ENST00000590339 PRTN3P24158 256 aa7.57□□□□□ -1.2
VPS25-205ENST00000590339 COX7A1P24310 79 aa7.57□□□□□ -1.2
VPS25-205ENST00000590339 SRP14P37108 136 aaKnown RBP7.57□□□□□ -1.2
VPS25-205ENST00000590339 FHITP49789 147 aa7.57□□□□□ -1.2
VPS25-205ENST00000590339 DLX1P56177 255 aa7.57□□□□□ -1.2
VPS25-205ENST00000590339 RPP30P78346 268 aaKnown RBP7.57□□□□□ -1.2
VPS25-205ENST00000590339 BSXQ3C1V8 233 aa7.57□□□□□ -1.2
VPS25-205ENST00000590339 OR8G2PQ6IF36 304 aa7.57□□□□□ -1.2
VPS25-205ENST00000590339 C1orf122Q6ZSJ8 110 aa7.57□□□□□ -1.2
VPS25-205ENST00000590339 CCDC28AQ8IWP9 274 aa7.57□□□□□ -1.2
VPS25-205ENST00000590339 PNKDQ8N490 385 aa7.57□□□□□ -1.2
VPS25-205ENST00000590339 BPIFCQ8NFQ6 507 aa7.57□□□□□ -1.2
VPS25-205ENST00000590339 OR10P1Q8NGE3 313 aa7.57□□□□□ -1.2
VPS25-205ENST00000590339 OR4C13Q8NGP0 309 aa7.57□□□□□ -1.2
VPS25-205ENST00000590339 OR5B3Q8NH48 314 aa7.57□□□□□ -1.2
VPS25-205ENST00000590339 VSTM2AQ8TAG5 236 aa7.57□□□□□ -1.2
VPS25-205ENST00000590339 FAM213BQ8TBF2 198 aa7.57□□□□□ -1.2
VPS25-205ENST00000590339 LHX4Q969G2 390 aa7.57□□□□□ -1.2
VPS25-205ENST00000590339 FLYWCH2Q96CP2 140 aaKnown RBP7.57□□□□□ -1.2
VPS25-205ENST00000590339 RBMXL1Q96E39 390 aaKnown RBP7.57□□□□□ -1.2
VPS25-205ENST00000590339 RSG1Q9BU20 258 aa7.57□□□□□ -1.2
VPS25-205ENST00000590339 GGACTQ9BVM4 153 aa7.57□□□□□ -1.2
VPS25-205ENST00000590339 SCRT1Q9BWW7 348 aa7.57□□□□□ -1.2
VPS25-205ENST00000590339 MS4A7Q9GZW8 240 aaPredicted RBP7.57□□□□□ -1.2
VPS25-205ENST00000590339 HRH4Q9H3N8 390 aa7.57□□□□□ -1.2
VPS25-205ENST00000590339 UQCC1Q9NVA1 299 aa7.57□□□□□ -1.2
VPS25-205ENST00000590339 TMEM160Q9NX00 188 aa7.57□□□□□ -1.2
VPS25-205ENST00000590339 OR51B2Q9Y5P1 312 aa7.57□□□□□ -1.2
VPS25-205ENST00000590339 ZANQ9Y493 2812 aa7.56□□□□□ -1.2
VPS25-205ENST00000590339 SONP18583 2426 aaKnown RBP7.56□□□□□ -1.2
VPS25-205ENST00000590339 IGHV1-3A0A0C4DH29 117 aa7.56□□□□□ -1.2
VPS25-205ENST00000590339 TEX50A0A1B0GTY4 177 aa7.56□□□□□ -1.2
VPS25-205ENST00000590339 A0A1B0GW64 132 aa7.56□□□□□ -1.2
VPS25-205ENST00000590339 B4DSR2 109 aa7.56□□□□□ -1.2
VPS25-205ENST00000590339 FAM157AC9JC47 383 aa7.56□□□□□ -1.2
VPS25-205ENST00000590339 H7C2Y5 167 aa7.56□□□□□ -1.2
VPS25-205ENST00000590339 ENSAO43768 121 aaKnown RBP7.56□□□□□ -1.2
VPS25-205ENST00000590339 CD5P06127 495 aa7.56□□□□□ -1.2
VPS25-205ENST00000590339 CRYGBP07316 175 aa7.56□□□□□ -1.2
VPS25-205ENST00000590339 MYOD1P15172 320 aa7.56□□□□□ -1.2
VPS25-205ENST00000590339 HNF1AP20823 631 aa7.56□□□□□ -1.2
VPS25-205ENST00000590339 NPY1RP25929 384 aa7.56□□□□□ -1.2
VPS25-205ENST00000590339 SNCAP37840 140 aa7.56□□□□□ -1.2
VPS25-205ENST00000590339 LMO4P61968 165 aa7.56□□□□□ -1.2
VPS25-205ENST00000590339 DLK1P80370 383 aa7.56□□□□□ -1.2
VPS25-205ENST00000590339 SERF2P84101 59 aa7.56□□□□□ -1.2
VPS25-205ENST00000590339 SRSF3P84103 164 aaKnown RBP7.56□□□□□ -1.2
VPS25-205ENST00000590339 ZNF616Q08AN1 781 aa7.56□□□□□ -1.2
VPS25-205ENST00000590339 HABP2Q14520 560 aaPredicted RBP7.56□□□□□ -1.2
VPS25-205ENST00000590339 MRGPRG-AS1Q2M3A8 158 aa7.56□□□□□ -1.2
VPS25-205ENST00000590339 LDLRAD2Q5SZI1 272 aa7.56□□□□□ -1.2
VPS25-205ENST00000590339 AKR1C8PQ5T2L2 129 aa7.56□□□□□ -1.2
VPS25-205ENST00000590339 TPTE2P1Q5T6R2 138 aa7.56□□□□□ -1.2
VPS25-205ENST00000590339 SLC25A24Q6NUK1 477 aa7.56□□□□□ -1.2
VPS25-205ENST00000590339 SPSB3Q6PJ21 355 aa7.56□□□□□ -1.2
VPS25-205ENST00000590339 LFNGQ8NES3 379 aa7.56□□□□□ -1.2
VPS25-205ENST00000590339 SLC24A4Q8NFF2 622 aa7.56□□□□□ -1.2
VPS25-205ENST00000590339 SCGB1C1Q8TD33 95 aa7.56□□□□□ -1.2
VPS25-205ENST00000590339 SIRPDQ9H106 197 aa7.56□□□□□ -1.2
VPS25-205ENST00000590339 HEYLQ9NQ87 328 aaPredicted RBP7.56□□□□□ -1.2
VPS25-205ENST00000590339 FKBP11Q9NYL4 201 aa7.56□□□□□ -1.2
VPS25-205ENST00000590339 WDR83OSQ9Y284 106 aa7.56□□□□□ -1.2
VPS25-205ENST00000590339 KPTNQ9Y664 436 aa7.56□□□□□ -1.2
VPS25-205ENST00000590339 TRAV1-1A0A0B4J248 108 aa7.55□□□□□ -1.2
VPS25-205ENST00000590339 IGHV2-70DA0A0C4DH43 119 aa7.55□□□□□ -1.2
VPS25-205ENST00000590339 TMEM218A2RU14 115 aa7.55□□□□□ -1.2
VPS25-205ENST00000590339 BTBD17A6NE02 478 aa7.55□□□□□ -1.2
VPS25-205ENST00000590339 CGB1A6NKQ9 187 aa7.55□□□□□ -1.2
VPS25-205ENST00000590339 FNDC10F2Z333 226 aa7.55□□□□□ -1.2
VPS25-205ENST00000590339 RRHO14718 337 aa7.55□□□□□ -1.2
VPS25-205ENST00000590339 TSPAN15O95858 294 aa7.55□□□□□ -1.2
VPS25-205ENST00000590339 PRH1P02810 166 aa7.55□□□□□ -1.2
VPS25-205ENST00000590339 ADCYAP1P18509 176 aa7.55□□□□□ -1.2
VPS25-205ENST00000590339 ZFP36P26651 326 aaKnown RBP7.55□□□□□ -1.2
VPS25-205ENST00000590339 LGALS7P47929 136 aa7.55□□□□□ -1.2
VPS25-205ENST00000590339 ATP5IP56385 69 aaPredicted RBP7.55□□□□□ -1.2
VPS25-205ENST00000590339 RPL8P62917 257 aaKnown RBP7.55□□□□□ -1.2
VPS25-205ENST00000590339 VMA21Q3ZAQ7 101 aa7.55□□□□□ -1.2
VPS25-205ENST00000590339 C10orf91Q5T1B1 145 aa7.55□□□□□ -1.2
VPS25-205ENST00000590339 ETV3LQ6ZN32 361 aa7.55□□□□□ -1.2
VPS25-205ENST00000590339 TEX45Q8NA69 505 aa7.55□□□□□ -1.2
VPS25-205ENST00000590339 CFHR4Q92496 578 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms