RNA–Protein interactions for RNA: ENST00000590188.5

CIRBP-227, Transcript of cold inducible RNA binding protein, human

TSL 3

Gene CIRBP, Length 361 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-227	ENST00000590188	WT1-AS	Q06250	92 aa		13.72	□□□□□ -0.21
CIRBP-227	ENST00000590188	LHFPL1	Q86WI0	220 aa		13.72	□□□□□ -0.21
CIRBP-227	ENST00000590188	TMEM229B	Q8NBD8	167 aa		13.72	□□□□□ -0.21
CIRBP-227	ENST00000590188	C15orf40	Q8WUR7	153 aa		13.72	□□□□□ -0.21
CIRBP-227	ENST00000590188	MRGPRF	Q96AM1	343 aa		13.72	□□□□□ -0.21
CIRBP-227	ENST00000590188	ISOC1	Q96CN7	298 aa		13.72	□□□□□ -0.21
CIRBP-227	ENST00000590188	PEMT	Q9UBM1	199 aa		13.72	□□□□□ -0.21
CIRBP-227	ENST00000590188	SELENOK	Q9Y6D0	94 aa		13.72	□□□□□ -0.21
CIRBP-227	ENST00000590188	IGHV3-21	A0A0B4J1V1	117 aa		13.71	□□□□□ -0.21
CIRBP-227	ENST00000590188	GGCT	O75223	188 aa	Known RBP	13.71	□□□□□ -0.21
CIRBP-227	ENST00000590188	MECP2	P51608	486 aa	Known RBP	13.71	□□□□□ -0.21
CIRBP-227	ENST00000590188	PIGP	P57054	158 aa		13.71	□□□□□ -0.21
CIRBP-227	ENST00000590188	SLC25A24	Q6NUK1	477 aa		13.71	□□□□□ -0.21
CIRBP-227	ENST00000590188	STEAP1B	Q6NZ63	245 aa		13.71	□□□□□ -0.21
CIRBP-227	ENST00000590188	ARRDC1	Q8N5I2	433 aa		13.71	□□□□□ -0.21
CIRBP-227	ENST00000590188	BCL7B	Q9BQE9	202 aa		13.71	□□□□□ -0.21
CIRBP-227	ENST00000590188	SORL1	Q92673	2214 aa		13.7	□□□□□ -0.22
CIRBP-227	ENST00000590188	IZUMO1R	A6ND01	250 aa		13.7	□□□□□ -0.22
CIRBP-227	ENST00000590188	CCDC160	A6NGH7	325 aa		13.7	□□□□□ -0.22
CIRBP-227	ENST00000590188	TPPP	O94811	219 aa		13.7	□□□□□ -0.22
CIRBP-227	ENST00000590188	CD74	P04233	296 aa		13.7	□□□□□ -0.22
CIRBP-227	ENST00000590188	SERPINE2	P07093	398 aa		13.7	□□□□□ -0.22
CIRBP-227	ENST00000590188	IZUMO4	Q1ZYL8	232 aa		13.7	□□□□□ -0.22
CIRBP-227	ENST00000590188	H2BFWT	Q7Z2G1	175 aa		13.7	□□□□□ -0.22
CIRBP-227	ENST00000590188	GDPD1	Q8N9F7	314 aa		13.7	□□□□□ -0.22
CIRBP-227	ENST00000590188	MARCH1	Q8TCQ1	289 aa		13.7	□□□□□ -0.22
CIRBP-227	ENST00000590188	LSM10	Q969L4	123 aa	Known RBP	13.7	□□□□□ -0.22
CIRBP-227	ENST00000590188	SEC22A	Q96IW7	307 aa		13.7	□□□□□ -0.22
CIRBP-227	ENST00000590188	SRSF8	Q9BRL6	282 aa	Known RBP	13.7	□□□□□ -0.22
CIRBP-227	ENST00000590188	NDUFA4L2	Q9NRX3	87 aa		13.7	□□□□□ -0.22
CIRBP-227	ENST00000590188	PRND	Q9UKY0	176 aa		13.7	□□□□□ -0.22
CIRBP-227	ENST00000590188	HUWE1	Q7Z6Z7	4374 aa	Known RBP	13.7	□□□□□ -0.22
CIRBP-227	ENST00000590188	C15orf61	A6NNL5	157 aa		13.69	□□□□□ -0.22
CIRBP-227	ENST00000590188	CLEC3B	P05452	202 aa		13.69	□□□□□ -0.22
CIRBP-227	ENST00000590188	TBP	P20226	339 aa		13.69	□□□□□ -0.22
CIRBP-227	ENST00000590188	GPR183	P32249	361 aa		13.69	□□□□□ -0.22
CIRBP-227	ENST00000590188	RND3	P61587	244 aa		13.69	□□□□□ -0.22
CIRBP-227	ENST00000590188	MRPS10	P82664	201 aa	Known RBP	13.69	□□□□□ -0.22
CIRBP-227	ENST00000590188	THOC7	Q6I9Y2	204 aa	Known RBP	13.69	□□□□□ -0.22
CIRBP-227	ENST00000590188	ADAMTSL5	Q6ZMM2	481 aa		13.69	□□□□□ -0.22
CIRBP-227	ENST00000590188	OR13C8	Q8NGS7	320 aa		13.69	□□□□□ -0.22
CIRBP-227	ENST00000590188	OR4A16	Q8NH70	328 aa		13.69	□□□□□ -0.22
CIRBP-227	ENST00000590188	DYNLRB2	Q8TF09	96 aa		13.69	□□□□□ -0.22
CIRBP-227	ENST00000590188	SMIM4	Q8WVI0	70 aa		13.69	□□□□□ -0.22
CIRBP-227	ENST00000590188	TP53RK	Q96S44	253 aa		13.69	□□□□□ -0.22
CIRBP-227	ENST00000590188	TSC22D3	Q99576	134 aa		13.69	□□□□□ -0.22
CIRBP-227	ENST00000590188	SLIRP	Q9GZT3	109 aa	Known RBP	13.69	□□□□□ -0.22
CIRBP-227	ENST00000590188	COPZ2	Q9P299	210 aa		13.69	□□□□□ -0.22
CIRBP-227	ENST00000590188	IGHV3-35	A0A0C4DH35	117 aa		13.68	□□□□□ -0.22
CIRBP-227	ENST00000590188	ZNF320	A2RRD8	509 aa		13.68	□□□□□ -0.22
CIRBP-227	ENST00000590188		H0Y980	276 aa		13.68	□□□□□ -0.22
CIRBP-227	ENST00000590188	FGF2	P09038	288 aa		13.68	□□□□□ -0.22
CIRBP-227	ENST00000590188	FRMD6-AS1	P0C7T7	363 aa		13.68	□□□□□ -0.22
CIRBP-227	ENST00000590188	MFAP2	P55001	183 aa		13.68	□□□□□ -0.22
CIRBP-227	ENST00000590188	KLK9	Q2XQG4	91 aa		13.68	□□□□□ -0.22
CIRBP-227	ENST00000590188	SP6	Q3SY56	376 aa		13.68	□□□□□ -0.22
CIRBP-227	ENST00000590188	SPINK9	Q5DT21	86 aa		13.68	□□□□□ -0.22
CIRBP-227	ENST00000590188	FAM209B	Q5JX69	171 aa		13.68	□□□□□ -0.22
CIRBP-227	ENST00000590188	TERB2	Q8NHR7	220 aa		13.68	□□□□□ -0.22
CIRBP-227	ENST00000590188	CACNG8	Q8WXS5	425 aa		13.68	□□□□□ -0.22
CIRBP-227	ENST00000590188	ZNF486	Q96H40	463 aa	Predicted RBP	13.68	□□□□□ -0.22
CIRBP-227	ENST00000590188	CXorf58	Q96LI9	332 aa		13.68	□□□□□ -0.22
CIRBP-227	ENST00000590188	FAM212B	Q9NTI7	297 aa	Predicted RBP	13.68	□□□□□ -0.22
CIRBP-227	ENST00000590188	KLK9	Q9UKQ9	250 aa		13.68	□□□□□ -0.22
CIRBP-227	ENST00000590188	CEPT1	Q9Y6K0	416 aa		13.68	□□□□□ -0.22
CIRBP-227	ENST00000590188	TRBV7-1	A0A0A6YYK4	115 aa		13.67	□□□□□ -0.22
CIRBP-227	ENST00000590188	C3orf85	A0A1B0GTC6	90 aa		13.67	□□□□□ -0.22
CIRBP-227	ENST00000590188	C2orf70	A6NJV1	201 aa		13.67	□□□□□ -0.22
CIRBP-227	ENST00000590188	PTBP1	P26599	531 aa	Known RBP eCLIP	13.67	□□□□□ -0.22
CIRBP-227	ENST00000590188	SBSPON	Q8IVN8	264 aa		13.67	□□□□□ -0.22
CIRBP-227	ENST00000590188	OR4C16	Q8NGL9	310 aa		13.67	□□□□□ -0.22
CIRBP-227	ENST00000590188	MCFD2	Q8NI22	146 aa		13.67	□□□□□ -0.22
CIRBP-227	ENST00000590188	ZNF502	Q8TBZ5	544 aa		13.67	□□□□□ -0.22
CIRBP-227	ENST00000590188	ZFAND1	Q8TCF1	268 aa		13.67	□□□□□ -0.22
CIRBP-227	ENST00000590188	TMEM56	Q96MV1	263 aa		13.67	□□□□□ -0.22
CIRBP-227	ENST00000590188	TMEM14B	Q9NUH8	114 aa		13.67	□□□□□ -0.22
CIRBP-227	ENST00000590188	FKBP11	Q9NYL4	201 aa		13.67	□□□□□ -0.22
CIRBP-227	ENST00000590188	THYN1	Q9P016	225 aa		13.67	□□□□□ -0.22
CIRBP-227	ENST00000590188	F11R	Q9Y624	299 aa	Known RBP	13.67	□□□□□ -0.22
CIRBP-227	ENST00000590188	DISC1	C4P0D8	188 aa		13.66	□□□□□ -0.22
CIRBP-227	ENST00000590188	CYB5B	O43169	146 aa		13.66	□□□□□ -0.22
CIRBP-227	ENST00000590188	NHLRC4	P0CG21	123 aa	Predicted RBP	13.66	□□□□□ -0.22
CIRBP-227	ENST00000590188	FOLR2	P14207	255 aa		13.66	□□□□□ -0.22
CIRBP-227	ENST00000590188	AKR1C2	P52895	323 aa		13.66	□□□□□ -0.22
CIRBP-227	ENST00000590188	MEF2D	Q14814	521 aa		13.66	□□□□□ -0.22
CIRBP-227	ENST00000590188	TRIM16L	Q309B1	348 aa		13.66	□□□□□ -0.22
CIRBP-227	ENST00000590188	CD300E	Q496F6	205 aa	Predicted RBP	13.66	□□□□□ -0.22
CIRBP-227	ENST00000590188	LCN12	Q6JVE5	192 aa		13.66	□□□□□ -0.22
CIRBP-227	ENST00000590188	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	13.66	□□□□□ -0.22
CIRBP-227	ENST00000590188		Q8N1Y9	231 aa		13.66	□□□□□ -0.22
CIRBP-227	ENST00000590188		Q8N402	240 aa		13.66	□□□□□ -0.22
CIRBP-227	ENST00000590188	CCDC71L	Q8N9Z2	235 aa		13.66	□□□□□ -0.22
CIRBP-227	ENST00000590188	OR5B3	Q8NH48	314 aa		13.66	□□□□□ -0.22
CIRBP-227	ENST00000590188	SIGLEC8	Q9NYZ4	499 aa		13.66	□□□□□ -0.22
CIRBP-227	ENST00000590188		U3KQK5	164 aa		13.66	□□□□□ -0.22
CIRBP-227	ENST00000590188	OR2T8	A6NH00	312 aa		13.65	□□□□□ -0.22
CIRBP-227	ENST00000590188	CTDSPL	O15194	276 aa		13.65	□□□□□ -0.22
CIRBP-227	ENST00000590188	IGKV1-5	P01602	117 aa		13.65	□□□□□ -0.22
CIRBP-227	ENST00000590188	CTSD	P07339	412 aa	Predicted RBP	13.65	□□□□□ -0.22
CIRBP-227	ENST00000590188	AKAIN1	P0CW23	69 aa		13.65	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms