RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 DEFB121Q5J5C9 76 aa11.38□□□□□ -0.59
ATG4D-207ENST00000587256 CTRB2Q6GPI1 263 aa11.38□□□□□ -0.59
ATG4D-207ENST00000587256 ACSM6Q6P461 480 aa11.38□□□□□ -0.59
ATG4D-207ENST00000587256 H2BFWTQ7Z2G1 175 aa11.38□□□□□ -0.59
ATG4D-207ENST00000587256 PRR25Q96S07 402 aa11.38□□□□□ -0.59
ATG4D-207ENST00000587256 PRRT1Q99946 306 aa11.38□□□□□ -0.59
ATG4D-207ENST00000587256 SRSF8Q9BRL6 282 aaKnown RBP11.38□□□□□ -0.59
ATG4D-207ENST00000587256 C14orf166Q9Y224 244 aaKnown RBP11.38□□□□□ -0.59
ATG4D-207ENST00000587256 ZNF256Q9Y2P7 627 aaPredicted RBP11.38□□□□□ -0.59
ATG4D-207ENST00000587256 OR51B2Q9Y5P1 312 aa11.38□□□□□ -0.59
ATG4D-207ENST00000587256 TEX50A0A1B0GTY4 177 aa11.37□□□□□ -0.59
ATG4D-207ENST00000587256 C15orf61A6NNL5 157 aa11.37□□□□□ -0.59
ATG4D-207ENST00000587256 CYB5BO43169 146 aa11.37□□□□□ -0.59
ATG4D-207ENST00000587256 CTSDP07339 412 aaPredicted RBP11.37□□□□□ -0.59
ATG4D-207ENST00000587256 MECP2P51608 486 aaKnown RBP11.37□□□□□ -0.59
ATG4D-207ENST00000587256 AKR1C2P52895 323 aa11.37□□□□□ -0.59
ATG4D-207ENST00000587256 SYNJ2BPP57105 145 aa11.37□□□□□ -0.59
ATG4D-207ENST00000587256 DCTN2Q13561 401 aaKnown RBP11.37□□□□□ -0.59
ATG4D-207ENST00000587256 TRIM16LQ309B1 348 aa11.37□□□□□ -0.59
ATG4D-207ENST00000587256 PYDC2Q56P42 97 aa11.37□□□□□ -0.59
ATG4D-207ENST00000587256 FAM209BQ5JX69 171 aa11.37□□□□□ -0.59
ATG4D-207ENST00000587256 HSD17B13Q7Z5P4 300 aaPredicted RBP11.37□□□□□ -0.59
ATG4D-207ENST00000587256 OR10W1Q8NGF6 305 aa11.37□□□□□ -0.59
ATG4D-207ENST00000587256 OR5B3Q8NH48 314 aa11.37□□□□□ -0.59
ATG4D-207ENST00000587256 LSM10Q969L4 123 aaKnown RBP11.37□□□□□ -0.59
ATG4D-207ENST00000587256 SEC22AQ96IW7 307 aa11.37□□□□□ -0.59
ATG4D-207ENST00000587256 TP53RKQ96S44 253 aa11.37□□□□□ -0.59
ATG4D-207ENST00000587256 MCUBQ9NWR8 336 aa11.37□□□□□ -0.59
ATG4D-207ENST00000587256 FKBP11Q9NYL4 201 aa11.37□□□□□ -0.59
ATG4D-207ENST00000587256 S4R3C0 116 aa11.37□□□□□ -0.59
ATG4D-207ENST00000587256 IGLV11-55A0A075B6I3 123 aa11.36□□□□□ -0.59
ATG4D-207ENST00000587256 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.36□□□□□ -0.59
ATG4D-207ENST00000587256 C3orf85A0A1B0GTC6 90 aa11.36□□□□□ -0.59
ATG4D-207ENST00000587256 ANKRD20A5PA0PJZ0 165 aa11.36□□□□□ -0.59
ATG4D-207ENST00000587256 BMPR1BO00238 502 aa11.36□□□□□ -0.59
ATG4D-207ENST00000587256 NDUFB8O95169 186 aa11.36□□□□□ -0.59
ATG4D-207ENST00000587256 IGKV1-39P01597 117 aa11.36□□□□□ -0.59
ATG4D-207ENST00000587256 IGHV3-23P01764 117 aa11.36□□□□□ -0.59
ATG4D-207ENST00000587256 IGKV1D-39P04432 117 aa11.36□□□□□ -0.59
ATG4D-207ENST00000587256 OR13C7P0DN81 318 aa11.36□□□□□ -0.59
ATG4D-207ENST00000587256 PTBP1P26599 531 aaKnown RBP eCLIP11.36□□□□□ -0.59
ATG4D-207ENST00000587256 SURF2Q15527 256 aaPredicted RBP11.36□□□□□ -0.59
ATG4D-207ENST00000587256 TATDN3Q17R31 274 aa11.36□□□□□ -0.59
ATG4D-207ENST00000587256 CADM3Q8N126 398 aa11.36□□□□□ -0.59
ATG4D-207ENST00000587256 GDPD1Q8N9F7 314 aa11.36□□□□□ -0.59
ATG4D-207ENST00000587256 OR51S1Q8NGJ8 323 aa11.36□□□□□ -0.59
ATG4D-207ENST00000587256 OR9G4Q8NGQ1 327 aa11.36□□□□□ -0.59
ATG4D-207ENST00000587256 OR6Q1Q8NGQ2 317 aa11.36□□□□□ -0.59
ATG4D-207ENST00000587256 OR4A16Q8NH70 328 aa11.36□□□□□ -0.59
ATG4D-207ENST00000587256 EEF1AKMT3Q96AZ1 226 aa11.36□□□□□ -0.59
ATG4D-207ENST00000587256 FANCD2OSQ96PS1 177 aa11.36□□□□□ -0.59
ATG4D-207ENST00000587256 ATG12O94817 140 aa11.35□□□□□ -0.59
ATG4D-207ENST00000587256 WT1-ASQ06250 92 aa11.35□□□□□ -0.59
ATG4D-207ENST00000587256 KLF5Q13887 457 aaPredicted RBP11.35□□□□□ -0.59
ATG4D-207ENST00000587256 HAPLN4Q86UW8 402 aa11.35□□□□□ -0.59
ATG4D-207ENST00000587256 RNASE11Q8TAA1 199 aaKnown RBP11.35□□□□□ -0.59
ATG4D-207ENST00000587256 TMEM56Q96MV1 263 aa11.35□□□□□ -0.59
ATG4D-207ENST00000587256 SOSTQ9BQB4 213 aa11.35□□□□□ -0.59
ATG4D-207ENST00000587256 THAP7Q9BT49 309 aaPredicted RBP11.35□□□□□ -0.59
ATG4D-207ENST00000587256 NDUFA4L2Q9NRX3 87 aa11.35□□□□□ -0.59
ATG4D-207ENST00000587256 TMEM14BQ9NUH8 114 aa11.35□□□□□ -0.59
ATG4D-207ENST00000587256 THYN1Q9P016 225 aa11.35□□□□□ -0.59
ATG4D-207ENST00000587256 SCP2D1Q9UJQ7 156 aa11.35□□□□□ -0.59
ATG4D-207ENST00000587256 V9GYH0 126 aa11.35□□□□□ -0.59
ATG4D-207ENST00000587256 TEX13DA0A0J9YY54 714 aaPredicted RBP11.34□□□□□ -0.59
ATG4D-207ENST00000587256 MFSD2BA6NFX1 497 aa11.34□□□□□ -0.59
ATG4D-207ENST00000587256 PPP5D1E7EU14 171 aa11.34□□□□□ -0.59
ATG4D-207ENST00000587256 B3GALNT1O75752 331 aa11.34□□□□□ -0.59
ATG4D-207ENST00000587256 FAUP35544 74 aaKnown RBP11.34□□□□□ -0.59
ATG4D-207ENST00000587256 ARL3P36405 182 aa11.34□□□□□ -0.59
ATG4D-207ENST00000587256 AP3S2P59780 193 aa11.34□□□□□ -0.59
ATG4D-207ENST00000587256 SP6Q3SY56 376 aa11.34□□□□□ -0.59
ATG4D-207ENST00000587256 CLEC19AQ6UXS0 136 aa11.34□□□□□ -0.59
ATG4D-207ENST00000587256 Q8N402 240 aa11.34□□□□□ -0.59
ATG4D-207ENST00000587256 CXorf58Q96LI9 332 aa11.34□□□□□ -0.59
ATG4D-207ENST00000587256 CCDC140Q96MF4 163 aa11.34□□□□□ -0.59
ATG4D-207ENST00000587256 PEMTQ9UBM1 199 aa11.34□□□□□ -0.59
ATG4D-207ENST00000587256 DBX1A6NMT0 343 aa11.33□□□□□ -0.6
ATG4D-207ENST00000587256 GGCTO75223 188 aaKnown RBP11.33□□□□□ -0.6
ATG4D-207ENST00000587256 SPNP16150 400 aa11.33□□□□□ -0.6
ATG4D-207ENST00000587256 UCP1P25874 307 aa11.33□□□□□ -0.6
ATG4D-207ENST00000587256 KLK9Q2XQG4 91 aa11.33□□□□□ -0.6
ATG4D-207ENST00000587256 SPANXN2Q5MJ10 180 aa11.33□□□□□ -0.6
ATG4D-207ENST00000587256 TRIM63Q969Q1 353 aa11.33□□□□□ -0.6
ATG4D-207ENST00000587256 C5orf66Q9H5L9 145 aa11.33□□□□□ -0.6
ATG4D-207ENST00000587256 NAA60Q9H7X0 242 aa11.33□□□□□ -0.6
ATG4D-207ENST00000587256 SLC2A8Q9NY64 477 aa11.33□□□□□ -0.6
ATG4D-207ENST00000587256 KLK9Q9UKQ9 250 aa11.33□□□□□ -0.6
ATG4D-207ENST00000587256 F11RQ9Y624 299 aaKnown RBP11.33□□□□□ -0.6
ATG4D-207ENST00000587256 TRBV7-1A0A0A6YYK4 115 aa11.32□□□□□ -0.6
ATG4D-207ENST00000587256 IGKV1-5P01602 117 aa11.32□□□□□ -0.6
ATG4D-207ENST00000587256 HLA-AP01891 365 aaKnown RBP11.32□□□□□ -0.6
ATG4D-207ENST00000587256 OR5AC1P0C628 307 aa11.32□□□□□ -0.6
ATG4D-207ENST00000587256 PRCDQ00LT1 54 aa11.32□□□□□ -0.6
ATG4D-207ENST00000587256 ZNF79Q15937 498 aa11.32□□□□□ -0.6
ATG4D-207ENST00000587256 IZUMO4Q1ZYL8 232 aa11.32□□□□□ -0.6
ATG4D-207ENST00000587256 SLC25A24Q6NUK1 477 aa11.32□□□□□ -0.6
ATG4D-207ENST00000587256 CCDC190Q86UF4 302 aa11.32□□□□□ -0.6
ATG4D-207ENST00000587256 TOMM5Q8N4H5 51 aa11.32□□□□□ -0.6
ATG4D-207ENST00000587256 RRNAD1Q96FB5 475 aaKnown RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms