RNA–Protein interactions for RNA: ENST00000585448.1

SMAD4-203, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-203ENST00000585448 LCN12Q6JVE5 192 aa5.03□□□□□ -1.6
SMAD4-203ENST00000585448 EBLN2Q6P2I7 272 aa5.03□□□□□ -1.6
SMAD4-203ENST00000585448 PIP4P1Q86T03 277 aa5.03□□□□□ -1.6
SMAD4-203ENST00000585448 LYPD6Q86Y78 171 aa5.03□□□□□ -1.6
SMAD4-203ENST00000585448 ZNF683Q8IZ20 524 aa5.03□□□□□ -1.6
SMAD4-203ENST00000585448 SLC22A24Q8N4F4 322 aa5.03□□□□□ -1.6
SMAD4-203ENST00000585448 OR6K6Q8NGW6 343 aa5.03□□□□□ -1.6
SMAD4-203ENST00000585448 OSR1Q8TAX0 266 aaPredicted RBP5.03□□□□□ -1.6
SMAD4-203ENST00000585448 GRAPLQ8TC17 118 aaPredicted RBP5.03□□□□□ -1.6
SMAD4-203ENST00000585448 ZNF721Q8TF20 911 aa5.03□□□□□ -1.6
SMAD4-203ENST00000585448 NPIPB3Q92617 1050 aa5.03□□□□□ -1.6
SMAD4-203ENST00000585448 ADAT3Q96EY9 351 aaPredicted RBP5.03□□□□□ -1.6
SMAD4-203ENST00000585448 CDX2Q99626 313 aaPredicted RBP5.03□□□□□ -1.6
SMAD4-203ENST00000585448 TMEM204Q9BSN7 226 aa5.03□□□□□ -1.6
SMAD4-203ENST00000585448 IFI27L2Q9H2X8 130 aa5.03□□□□□ -1.6
SMAD4-203ENST00000585448 KCNK15Q9H427 330 aa5.03□□□□□ -1.6
SMAD4-203ENST00000585448 PELI2Q9HAT8 420 aa5.03□□□□□ -1.6
SMAD4-203ENST00000585448 PDFQ9HBH1 243 aa5.03□□□□□ -1.6
SMAD4-203ENST00000585448 ENY2Q9NPA8 101 aa5.03□□□□□ -1.6
SMAD4-203ENST00000585448 KCNIP2Q9NS61 270 aa5.03□□□□□ -1.6
SMAD4-203ENST00000585448 ZNF835Q9Y2P0 537 aa5.03□□□□□ -1.6
SMAD4-203ENST00000585448 COL18A1P39060 1754 aa5.03□□□□□ -1.6
SMAD4-203ENST00000585448 COL4A1P02462 1669 aa5.02□□□□□ -1.61
SMAD4-203ENST00000585448 TICRRQ7Z2Z1 1910 aa5.02□□□□□ -1.61
SMAD4-203ENST00000585448 M0QZQ0 153 aa5.02□□□□□ -1.61
SMAD4-203ENST00000585448 PRYO14603 147 aa5.02□□□□□ -1.61
SMAD4-203ENST00000585448 LYPD3O95274 346 aa5.02□□□□□ -1.61
SMAD4-203ENST00000585448 C8orf88P0DMB2 117 aa5.02□□□□□ -1.61
SMAD4-203ENST00000585448 PVRP15151 417 aa5.02□□□□□ -1.61
SMAD4-203ENST00000585448 GABRG2P18507 467 aa5.02□□□□□ -1.61
SMAD4-203ENST00000585448 BLVRBP30043 206 aaPredicted RBP5.02□□□□□ -1.61
SMAD4-203ENST00000585448 CXCL12P48061 93 aa5.02□□□□□ -1.61
SMAD4-203ENST00000585448 RPL27P61353 136 aaKnown RBP5.02□□□□□ -1.61
SMAD4-203ENST00000585448 QRFPP83859 136 aa5.02□□□□□ -1.61
SMAD4-203ENST00000585448 ATP5G2Q06055 141 aa5.02□□□□□ -1.61
SMAD4-203ENST00000585448 CXCL9Q07325 125 aa5.02□□□□□ -1.61
SMAD4-203ENST00000585448 GAGE2BQ13066 116 aa5.02□□□□□ -1.61
SMAD4-203ENST00000585448 ARFRP1Q13795 201 aa5.02□□□□□ -1.61
SMAD4-203ENST00000585448 ZNF726P1Q15940 193 aa5.02□□□□□ -1.61
SMAD4-203ENST00000585448 GAGE2EQ4V326 116 aa5.02□□□□□ -1.61
SMAD4-203ENST00000585448 WDR38Q5JTN6 314 aa5.02□□□□□ -1.61
SMAD4-203ENST00000585448 LINC01590Q5TEZ4 76 aa5.02□□□□□ -1.61
SMAD4-203ENST00000585448 C1orf140Q5VVS0 124 aa5.02□□□□□ -1.61
SMAD4-203ENST00000585448 RHBDD2Q6NTF9 364 aa5.02□□□□□ -1.61
SMAD4-203ENST00000585448 CDC42EP5Q6NZY7 148 aa5.02□□□□□ -1.61
SMAD4-203ENST00000585448 Q6ZS49 121 aa5.02□□□□□ -1.61
SMAD4-203ENST00000585448 C2orf91Q6ZV80 131 aa5.02□□□□□ -1.61
SMAD4-203ENST00000585448 SPEM1Q8N4L4 309 aa5.02□□□□□ -1.61
SMAD4-203ENST00000585448 ZNF645Q8N7E2 425 aa5.02□□□□□ -1.61
SMAD4-203ENST00000585448 ZNRF2Q8NHG8 242 aa5.02□□□□□ -1.61
SMAD4-203ENST00000585448 PFN4Q8NHR9 129 aa5.02□□□□□ -1.61
SMAD4-203ENST00000585448 GTSF1Q8WW33 167 aa5.02□□□□□ -1.61
SMAD4-203ENST00000585448 DDB2Q92466 427 aa5.02□□□□□ -1.61
SMAD4-203ENST00000585448 CHCHD1Q96BP2 118 aaKnown RBP5.02□□□□□ -1.61
SMAD4-203ENST00000585448 SLC25A44Q96H78 314 aaPredicted RBP5.02□□□□□ -1.61
SMAD4-203ENST00000585448 SGK494Q96LW2 274 aa5.02□□□□□ -1.61
SMAD4-203ENST00000585448 NMNAT3Q96T66 252 aa5.02□□□□□ -1.61
SMAD4-203ENST00000585448 ATG10Q9H0Y0 220 aa5.02□□□□□ -1.61
SMAD4-203ENST00000585448 WSB2Q9NYS7 404 aaPredicted RBP5.02□□□□□ -1.61
SMAD4-203ENST00000585448 TAS2R4Q9NYW5 299 aa5.02□□□□□ -1.61
SMAD4-203ENST00000585448 GAGE2DQ9UEU5 116 aa5.02□□□□□ -1.61
SMAD4-203ENST00000585448 OR2W1Q9Y3N9 320 aa5.02□□□□□ -1.61
SMAD4-203ENST00000585448 ZNF831Q5JPB2 1677 aa5.02□□□□□ -1.61
SMAD4-203ENST00000585448 CCDC88CQ9P219 2028 aa5.01□□□□□ -1.61
SMAD4-203ENST00000585448 OOEPA6NGQ2 149 aa5.01□□□□□ -1.61
SMAD4-203ENST00000585448 DNAJC9-AS1A6NH13 148 aa5.01□□□□□ -1.61
SMAD4-203ENST00000585448 CCDC179H3BU77 68 aa5.01□□□□□ -1.61
SMAD4-203ENST00000585448 TNFSF14O43557 240 aa5.01□□□□□ -1.61
SMAD4-203ENST00000585448 DNPH1O43598 174 aa5.01□□□□□ -1.61
SMAD4-203ENST00000585448 APOMO95445 188 aa5.01□□□□□ -1.61
SMAD4-203ENST00000585448 APCSP02743 223 aa5.01□□□□□ -1.61
SMAD4-203ENST00000585448 RHOCP08134 193 aa5.01□□□□□ -1.61
SMAD4-203ENST00000585448 ASIPP42127 132 aa5.01□□□□□ -1.61
SMAD4-203ENST00000585448 ZNF136P52737 540 aa5.01□□□□□ -1.61
SMAD4-203ENST00000585448 HBG1P69891 147 aa5.01□□□□□ -1.61
SMAD4-203ENST00000585448 HBG2P69892 147 aa5.01□□□□□ -1.61
SMAD4-203ENST00000585448 PSG4Q00888 419 aa5.01□□□□□ -1.61
SMAD4-203ENST00000585448 EIF3IQ13347 325 aaKnown RBP5.01□□□□□ -1.61
SMAD4-203ENST00000585448 EDDM3AQ14507 147 aa5.01□□□□□ -1.61
SMAD4-203ENST00000585448 WFDC2Q14508 124 aa5.01□□□□□ -1.61
SMAD4-203ENST00000585448 TRIP6Q15654 476 aaKnown RBP5.01□□□□□ -1.61
SMAD4-203ENST00000585448 CEACAM16Q2WEN9 425 aa5.01□□□□□ -1.61
SMAD4-203ENST00000585448 MEIG1Q5JSS6 88 aa5.01□□□□□ -1.61
SMAD4-203ENST00000585448 RNASEKQ6P5S7 137 aaKnown RBP5.01□□□□□ -1.61
SMAD4-203ENST00000585448 CBLN3Q6UW01 205 aa5.01□□□□□ -1.61
SMAD4-203ENST00000585448 TMEM86AQ8N2M4 240 aa5.01□□□□□ -1.61
SMAD4-203ENST00000585448 OSR2Q8N2R0 312 aa5.01□□□□□ -1.61
SMAD4-203ENST00000585448 LRRC25Q8N386 305 aaPredicted RBP5.01□□□□□ -1.61
SMAD4-203ENST00000585448 RBMXL3Q8N7X1 1067 aaKnown RBP5.01□□□□□ -1.61
SMAD4-203ENST00000585448 KIR2DL5BQ8NHK3 375 aa5.01□□□□□ -1.61
SMAD4-203ENST00000585448 WIPF2Q8TF74 440 aaPredicted RBP5.01□□□□□ -1.61
SMAD4-203ENST00000585448 ST6GALNAC6Q969X2 333 aa5.01□□□□□ -1.61
SMAD4-203ENST00000585448 RPEQ96AT9 228 aa5.01□□□□□ -1.61
SMAD4-203ENST00000585448 CLDN23Q96B33 292 aa5.01□□□□□ -1.61
SMAD4-203ENST00000585448 DNAJA3Q96EY1 480 aa5.01□□□□□ -1.61
SMAD4-203ENST00000585448 RAB40CQ96S21 281 aa5.01□□□□□ -1.61
SMAD4-203ENST00000585448 GPX7Q96SL4 187 aaPredicted RBP5.01□□□□□ -1.61
SMAD4-203ENST00000585448 AMELYQ99218 206 aa5.01□□□□□ -1.61
SMAD4-203ENST00000585448 APOOQ9BUR5 198 aa5.01□□□□□ -1.61
SMAD4-203ENST00000585448 OBP2BQ9NPH6 170 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms