RNA–Protein interactions for RNA: ENST00000584773.5

SRSF1-208, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5 BASIC

Gene SRSF1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-208ENST00000584773 SPCS2Q15005 226 aa13.62□□□□□ -0.23
SRSF1-208ENST00000584773 MZT2AQ6P582 158 aa13.62□□□□□ -0.23
SRSF1-208ENST00000584773 MRPS26Q9BYN8 205 aaKnown RBP13.62□□□□□ -0.23
SRSF1-208ENST00000584773 WFDC10AQ9H1F0 79 aa13.62□□□□□ -0.23
SRSF1-208ENST00000584773 MIXL1Q9H2W2 232 aa13.62□□□□□ -0.23
SRSF1-208ENST00000584773 OR51B2Q9Y5P1 312 aa13.62□□□□□ -0.23
SRSF1-208ENST00000584773 ZNF785A8K8V0 405 aa13.61□□□□□ -0.23
SRSF1-208ENST00000584773 CLEC3BP05452 202 aa13.61□□□□□ -0.23
SRSF1-208ENST00000584773 PI3P19957 117 aa13.61□□□□□ -0.23
SRSF1-208ENST00000584773 DEFB114Q30KQ6 69 aa13.61□□□□□ -0.23
SRSF1-208ENST00000584773 UNQ9165/PRO28630Q6UXU0 137 aa13.61□□□□□ -0.23
SRSF1-208ENST00000584773 OR1L8Q8NGR8 309 aa13.61□□□□□ -0.23
SRSF1-208ENST00000584773 ZNF502Q8TBZ5 544 aa13.61□□□□□ -0.23
SRSF1-208ENST00000584773 AP3S1Q92572 193 aa13.61□□□□□ -0.23
SRSF1-208ENST00000584773 ABHD1Q96SE0 405 aa13.61□□□□□ -0.23
SRSF1-208ENST00000584773 PLEKHA3Q9HB20 300 aa13.61□□□□□ -0.23
SRSF1-208ENST00000584773 NDUFA4L2Q9NRX3 87 aa13.61□□□□□ -0.23
SRSF1-208ENST00000584773 ZNF320A2RRD8 509 aa13.6□□□□□ -0.23
SRSF1-208ENST00000584773 TMEM213A2RRL7 107 aa13.6□□□□□ -0.23
SRSF1-208ENST00000584773 LGALS9O00182 355 aa13.6□□□□□ -0.23
SRSF1-208ENST00000584773 CD3DP04234 171 aa13.6□□□□□ -0.23
SRSF1-208ENST00000584773 CD7P09564 240 aa13.6□□□□□ -0.23
SRSF1-208ENST00000584773 FAM209BQ5JX69 171 aa13.6□□□□□ -0.23
SRSF1-208ENST00000584773 GPR141Q7Z602 305 aa13.6□□□□□ -0.23
SRSF1-208ENST00000584773 GTSCR1Q86UQ5 136 aa13.6□□□□□ -0.23
SRSF1-208ENST00000584773 GPHB5Q86YW7 130 aa13.6□□□□□ -0.23
SRSF1-208ENST00000584773 GDPD1Q8N9F7 314 aa13.6□□□□□ -0.23
SRSF1-208ENST00000584773 OR4D10Q8NGI6 311 aa13.6□□□□□ -0.23
SRSF1-208ENST00000584773 WDR89Q96FK6 387 aaPredicted RBP13.6□□□□□ -0.23
SRSF1-208ENST00000584773 SRSF8Q9BRL6 282 aaKnown RBP13.6□□□□□ -0.23
SRSF1-208ENST00000584773 TM2D3Q9BRN9 247 aa13.6□□□□□ -0.23
SRSF1-208ENST00000584773 TRBV7-1A0A0A6YYK4 115 aa13.59□□□□□ -0.23
SRSF1-208ENST00000584773 A8MZ25 164 aa13.59□□□□□ -0.23
SRSF1-208ENST00000584773 SERPINE2P07093 398 aa13.59□□□□□ -0.23
SRSF1-208ENST00000584773 CD81P60033 236 aa13.59□□□□□ -0.23
SRSF1-208ENST00000584773 TM4SF20Q53R12 229 aa13.59□□□□□ -0.23
SRSF1-208ENST00000584773 SLC25A24Q6NUK1 477 aa13.59□□□□□ -0.23
SRSF1-208ENST00000584773 LAX1Q8IWV1 398 aa13.59□□□□□ -0.23
SRSF1-208ENST00000584773 SLC38A6Q8IZM9 456 aa13.59□□□□□ -0.23
SRSF1-208ENST00000584773 OR2K2Q8NGT1 345 aa13.59□□□□□ -0.23
SRSF1-208ENST00000584773 MRGPRFQ96AM1 343 aa13.59□□□□□ -0.23
SRSF1-208ENST00000584773 CXorf58Q96LI9 332 aa13.59□□□□□ -0.23
SRSF1-208ENST00000584773 ZMAT4Q9H898 229 aa13.59□□□□□ -0.23
SRSF1-208ENST00000584773 CTDSP2O14595 271 aa13.58□□□□□ -0.24
SRSF1-208ENST00000584773 SNAPC5O75971 98 aa13.58□□□□□ -0.24
SRSF1-208ENST00000584773 FGF2P09038 288 aa13.58□□□□□ -0.24
SRSF1-208ENST00000584773 PGAM2P15259 253 aa13.58□□□□□ -0.24
SRSF1-208ENST00000584773 CBLN1P23435 193 aa13.58□□□□□ -0.24
SRSF1-208ENST00000584773 PPP5CP53041 499 aa13.58□□□□□ -0.24
SRSF1-208ENST00000584773 UCP3P55916 312 aa13.58□□□□□ -0.24
SRSF1-208ENST00000584773 GUCA2BQ16661 112 aa13.58□□□□□ -0.24
SRSF1-208ENST00000584773 IZUMO4Q1ZYL8 232 aa13.58□□□□□ -0.24
SRSF1-208ENST00000584773 LPCAT3Q6P1A2 487 aa13.58□□□□□ -0.24
SRSF1-208ENST00000584773 LSM10Q969L4 123 aaKnown RBP13.58□□□□□ -0.24
SRSF1-208ENST00000584773 SEC22AQ96IW7 307 aa13.58□□□□□ -0.24
SRSF1-208ENST00000584773 NEURL2Q9BR09 285 aa13.58□□□□□ -0.24
SRSF1-208ENST00000584773 MLXQ9UH92 298 aa13.58□□□□□ -0.24
SRSF1-208ENST00000584773 OR2T8A6NH00 312 aa13.57□□□□□ -0.24
SRSF1-208ENST00000584773 C15orf61A6NNL5 157 aa13.57□□□□□ -0.24
SRSF1-208ENST00000584773 PTBP1P26599 531 aaKnown RBP eCLIP13.57□□□□□ -0.24
SRSF1-208ENST00000584773 HAGHQ16775 308 aa13.57□□□□□ -0.24
SRSF1-208ENST00000584773 RNASE10Q5GAN6 216 aaKnown RBP13.57□□□□□ -0.24
SRSF1-208ENST00000584773 LHFPL1Q86WI0 220 aa13.57□□□□□ -0.24
SRSF1-208ENST00000584773 CLVS1Q8IUQ0 354 aaPredicted RBP13.57□□□□□ -0.24
SRSF1-208ENST00000584773 DEFB125Q8N687 156 aa13.57□□□□□ -0.24
SRSF1-208ENST00000584773 UXS1Q8NBZ7 420 aa13.57□□□□□ -0.24
SRSF1-208ENST00000584773 TUBA4BQ9H853 241 aa13.57□□□□□ -0.24
SRSF1-208ENST00000584773 RETNQ9HD89 108 aa13.57□□□□□ -0.24
SRSF1-208ENST00000584773 TMEM14BQ9NUH8 114 aa13.57□□□□□ -0.24
SRSF1-208ENST00000584773 MTFP1Q9UDX5 166 aa13.57□□□□□ -0.24
SRSF1-208ENST00000584773 F11RQ9Y624 299 aaKnown RBP13.57□□□□□ -0.24
SRSF1-208ENST00000584773 A8MWP6 167 aa13.56□□□□□ -0.24
SRSF1-208ENST00000584773 RGS5O15539 181 aa13.56□□□□□ -0.24
SRSF1-208ENST00000584773 IFNA6P05013 189 aa13.56□□□□□ -0.24
SRSF1-208ENST00000584773 S100GP29377 79 aa13.56□□□□□ -0.24
SRSF1-208ENST00000584773 FAM106AQ4KMX7 169 aa13.56□□□□□ -0.24
SRSF1-208ENST00000584773 THOC7Q6I9Y2 204 aaKnown RBP13.56□□□□□ -0.24
SRSF1-208ENST00000584773 FAAP20Q6NZ36 180 aa13.56□□□□□ -0.24
SRSF1-208ENST00000584773 PLET1Q6UQ28 207 aa13.56□□□□□ -0.24
SRSF1-208ENST00000584773 BTNL8Q6UX41 500 aa13.56□□□□□ -0.24
SRSF1-208ENST00000584773 TMEM61Q8N0U2 210 aa13.56□□□□□ -0.24
SRSF1-208ENST00000584773 PRNDQ9UKY0 176 aa13.56□□□□□ -0.24
SRSF1-208ENST00000584773 STARD9Q9P2P6 4700 aa13.56□□□□□ -0.24
SRSF1-208ENST00000584773 F8W735 103 aaPredicted RBP13.55□□□□□ -0.24
SRSF1-208ENST00000584773 K7EIM0 57 aa13.55□□□□□ -0.24
SRSF1-208ENST00000584773 TGOLN2O43493 480 aa13.55□□□□□ -0.24
SRSF1-208ENST00000584773 SPINK9Q5DT21 86 aa13.55□□□□□ -0.24
SRSF1-208ENST00000584773 H2BFWTQ7Z2G1 175 aa13.55□□□□□ -0.24
SRSF1-208ENST00000584773 CADM3Q8N126 398 aa13.55□□□□□ -0.24
SRSF1-208ENST00000584773 TP53RKQ96S44 253 aa13.55□□□□□ -0.24
SRSF1-208ENST00000584773 THYN1Q9P016 225 aa13.55□□□□□ -0.24
SRSF1-208ENST00000584773 DYNC2H1Q8NCM8 4307 aaKnown RBP13.55□□□□□ -0.24
SRSF1-208ENST00000584773 IGHV3OR16-8A0A075B7F1 116 aa13.54□□□□□ -0.24
SRSF1-208ENST00000584773 SCAF4O95104 1147 aaKnown RBP13.54□□□□□ -0.24
SRSF1-208ENST00000584773 IGKV1-5P01602 117 aa13.54□□□□□ -0.24
SRSF1-208ENST00000584773 PIGPP57054 158 aa13.54□□□□□ -0.24
SRSF1-208ENST00000584773 ZNF57Q68EA5 555 aaPredicted RBP13.54□□□□□ -0.24
SRSF1-208ENST00000584773 HSD17B13Q7Z5P4 300 aaPredicted RBP13.54□□□□□ -0.24
SRSF1-208ENST00000584773 UBAC2Q8NBM4 344 aa13.54□□□□□ -0.24
SRSF1-208ENST00000584773 OR5B3Q8NH48 314 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms