RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 OPN1MW2P0DN77 364 aa7.77□□□□□ -1.17
GGA3-209ENST00000580646 OPN1MW3P0DN78 364 aa7.77□□□□□ -1.17
GGA3-209ENST00000580646 ANXA3P12429 323 aa7.77□□□□□ -1.17
GGA3-209ENST00000580646 PI3P19957 117 aa7.77□□□□□ -1.17
GGA3-209ENST00000580646 UCP1P25874 307 aa7.77□□□□□ -1.17
GGA3-209ENST00000580646 UBE2MP61081 183 aaKnown RBP7.77□□□□□ -1.17
GGA3-209ENST00000580646 ERVK-16P61578 105 aa7.77□□□□□ -1.17
GGA3-209ENST00000580646 SLC35B1P78383 322 aa7.77□□□□□ -1.17
GGA3-209ENST00000580646 CX3CL1P78423 397 aa7.77□□□□□ -1.17
GGA3-209ENST00000580646 SSBP2P81877 361 aaPredicted RBP7.77□□□□□ -1.17
GGA3-209ENST00000580646 DHODHQ02127 395 aa7.77□□□□□ -1.17
GGA3-209ENST00000580646 TMEM267Q0VDI3 215 aaPredicted RBP7.77□□□□□ -1.17
GGA3-209ENST00000580646 PRSS8Q16651 343 aa7.77□□□□□ -1.17
GGA3-209ENST00000580646 TATDN3Q17R31 274 aa7.77□□□□□ -1.17
GGA3-209ENST00000580646 RNF212Q495C1 297 aa7.77□□□□□ -1.17
GGA3-209ENST00000580646 TMEM128Q5BJH2 165 aa7.77□□□□□ -1.17
GGA3-209ENST00000580646 CENPVQ7Z7K6 275 aaPredicted RBP7.77□□□□□ -1.17
GGA3-209ENST00000580646 NDUFA11Q86Y39 141 aa7.77□□□□□ -1.17
GGA3-209ENST00000580646 DUSP18Q8NEJ0 188 aa7.77□□□□□ -1.17
GGA3-209ENST00000580646 OR5AU1Q8NGC0 362 aa7.77□□□□□ -1.17
GGA3-209ENST00000580646 R3HDM4Q96D70 268 aa7.77□□□□□ -1.17
GGA3-209ENST00000580646 NAA60Q9H7X0 242 aa7.77□□□□□ -1.17
GGA3-209ENST00000580646 GSN-AS1Q9NRJ2 163 aa7.77□□□□□ -1.17
GGA3-209ENST00000580646 VSIG4Q9Y279 399 aa7.77□□□□□ -1.17
GGA3-209ENST00000580646 NBEAL2Q6ZNJ1 2754 aa7.77□□□□□ -1.17
GGA3-209ENST00000580646 PSMB11A5LHX3 300 aa7.76□□□□□ -1.17
GGA3-209ENST00000580646 LINC01548A6NM66 108 aa7.76□□□□□ -1.17
GGA3-209ENST00000580646 ADARB2-AS1A8MUL3 147 aa7.76□□□□□ -1.17
GGA3-209ENST00000580646 FCN1O00602 326 aa7.76□□□□□ -1.17
GGA3-209ENST00000580646 ATP6V0E1O15342 81 aa7.76□□□□□ -1.17
GGA3-209ENST00000580646 PLA2G10O15496 165 aa7.76□□□□□ -1.17
GGA3-209ENST00000580646 NUPL2O15504 423 aaKnown RBP7.76□□□□□ -1.17
GGA3-209ENST00000580646 LYRM1O43325 122 aa7.76□□□□□ -1.17
GGA3-209ENST00000580646 ATG12O94817 140 aa7.76□□□□□ -1.17
GGA3-209ENST00000580646 CDS2O95674 445 aa7.76□□□□□ -1.17
GGA3-209ENST00000580646 SERPINE2P07093 398 aa7.76□□□□□ -1.17
GGA3-209ENST00000580646 VDAC1P21796 283 aa7.76□□□□□ -1.17
GGA3-209ENST00000580646 BTCP35070 178 aa7.76□□□□□ -1.17
GGA3-209ENST00000580646 LPAR6P43657 344 aa7.76□□□□□ -1.17
GGA3-209ENST00000580646 SPCS3P61009 180 aa7.76□□□□□ -1.17
GGA3-209ENST00000580646 CFHR3Q02985 330 aa7.76□□□□□ -1.17
GGA3-209ENST00000580646 EXOSC2Q13868 293 aaKnown RBP7.76□□□□□ -1.17
GGA3-209ENST00000580646 AKIRIN2Q53H80 203 aa7.76□□□□□ -1.17
GGA3-209ENST00000580646 C19orf54Q5BKX5 351 aa7.76□□□□□ -1.17
GGA3-209ENST00000580646 OR4A47Q6IF82 309 aa7.76□□□□□ -1.17
GGA3-209ENST00000580646 C1QL4Q86Z23 238 aa7.76□□□□□ -1.17
GGA3-209ENST00000580646 SGPP2Q8IWX5 399 aa7.76□□□□□ -1.17
GGA3-209ENST00000580646 RNF152Q8N8N0 203 aa7.76□□□□□ -1.17
GGA3-209ENST00000580646 DMBX1Q8NFW5 382 aa7.76□□□□□ -1.17
GGA3-209ENST00000580646 ARPC1AQ92747 370 aa7.76□□□□□ -1.17
GGA3-209ENST00000580646 IL22RA2Q969J5 263 aa7.76□□□□□ -1.17
GGA3-209ENST00000580646 TMEM230Q96A57 120 aa7.76□□□□□ -1.17
GGA3-209ENST00000580646 SEC22AQ96IW7 307 aa7.76□□□□□ -1.17
GGA3-209ENST00000580646 TP53RKQ96S44 253 aa7.76□□□□□ -1.17
GGA3-209ENST00000580646 TMEM222Q9H0R3 208 aa7.76□□□□□ -1.17
GGA3-209ENST00000580646 ZNF430Q9H8G1 570 aaPredicted RBP7.76□□□□□ -1.17
GGA3-209ENST00000580646 TPSG1Q9NRR2 321 aa7.76□□□□□ -1.17
GGA3-209ENST00000580646 KCNIP3Q9Y2W7 256 aa7.76□□□□□ -1.17
GGA3-209ENST00000580646 NUBP2Q9Y5Y2 271 aa7.76□□□□□ -1.17
GGA3-209ENST00000580646 ALG5Q9Y673 324 aa7.76□□□□□ -1.17
GGA3-209ENST00000580646 TEX13DA0A0J9YY54 714 aaPredicted RBP7.75□□□□□ -1.17
GGA3-209ENST00000580646 UPK2O00526 184 aa7.75□□□□□ -1.17
GGA3-209ENST00000580646 ARPC1BO15143 372 aaKnown RBP7.75□□□□□ -1.17
GGA3-209ENST00000580646 ACTL6BO94805 426 aa7.75□□□□□ -1.17
GGA3-209ENST00000580646 BRI3O95415 125 aa7.75□□□□□ -1.17
GGA3-209ENST00000580646 IGKV1-39P01597 117 aa7.75□□□□□ -1.17
GGA3-209ENST00000580646 IGKV1D-39P04432 117 aa7.75□□□□□ -1.17
GGA3-209ENST00000580646 ELANEP08246 267 aa7.75□□□□□ -1.17
GGA3-209ENST00000580646 EGR2P11161 476 aaPredicted RBP7.75□□□□□ -1.17
GGA3-209ENST00000580646 PPIFP30405 207 aaKnown RBP7.75□□□□□ -1.17
GGA3-209ENST00000580646 SLC6A1P30531 599 aa7.75□□□□□ -1.17
GGA3-209ENST00000580646 CCR6P51684 374 aa7.75□□□□□ -1.17
GGA3-209ENST00000580646 RPL8P62917 257 aaKnown RBP7.75□□□□□ -1.17
GGA3-209ENST00000580646 SRPXP78539 464 aa7.75□□□□□ -1.17
GGA3-209ENST00000580646 NDPQ00604 133 aa7.75□□□□□ -1.17
GGA3-209ENST00000580646 FXYD3Q14802 87 aa7.75□□□□□ -1.17
GGA3-209ENST00000580646 TEX38Q6PEX7 206 aa7.75□□□□□ -1.17
GGA3-209ENST00000580646 FAM219AQ8IW50 185 aa7.75□□□□□ -1.17
GGA3-209ENST00000580646 VKORC1L1Q8N0U8 176 aa7.75□□□□□ -1.17
GGA3-209ENST00000580646 OR4F17Q8NGA8 305 aa7.75□□□□□ -1.17
GGA3-209ENST00000580646 OR4X2Q8NGF9 303 aa7.75□□□□□ -1.17
GGA3-209ENST00000580646 GLYATL2Q8WU03 294 aa7.75□□□□□ -1.17
GGA3-209ENST00000580646 TMEM56Q96MV1 263 aa7.75□□□□□ -1.17
GGA3-209ENST00000580646 OR4F4Q96R69 305 aa7.75□□□□□ -1.17
GGA3-209ENST00000580646 PARP11Q9NR21 331 aa7.75□□□□□ -1.17
GGA3-209ENST00000580646 TMEM140Q9NV12 185 aa7.75□□□□□ -1.17
GGA3-209ENST00000580646 TMEM56-RWDD3S4R434 201 aa7.75□□□□□ -1.17
GGA3-209ENST00000580646 TRAV41A0A0B4J266 112 aa7.74□□□□□ -1.17
GGA3-209ENST00000580646 DUXBA0A1W2PPF3 345 aa7.74□□□□□ -1.17
GGA3-209ENST00000580646 TCRBV4S1A1TA0A5B7 111 aa7.74□□□□□ -1.17
GGA3-209ENST00000580646 G3V4G9 280 aa7.74□□□□□ -1.17
GGA3-209ENST00000580646 H3BUA1 57 aa7.74□□□□□ -1.17
GGA3-209ENST00000580646 CNIH1O95406 144 aa7.74□□□□□ -1.17
GGA3-209ENST00000580646 IGLV1-40P01703 118 aa7.74□□□□□ -1.17
GGA3-209ENST00000580646 IGHG4P01861 327 aa7.74□□□□□ -1.17
GGA3-209ENST00000580646 OR5AC1P0C628 307 aa7.74□□□□□ -1.17
GGA3-209ENST00000580646 P0C879 139 aa7.74□□□□□ -1.17
GGA3-209ENST00000580646 SUPT4H1P63272 117 aaKnown RBP7.74□□□□□ -1.17
GGA3-209ENST00000580646 PJVKQ0ZLH3 352 aa7.74□□□□□ -1.17
GGA3-209ENST00000580646 FOXE3Q13461 319 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms