RNA–Protein interactions for RNA: ENST00000577598.5

BRIP1-202, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRIP1, Length 3,969 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-202ENST00000577598 H7BYZ3 331 aa3.92□□□□□ -1.78
BRIP1-202ENST00000577598 BGLAPP02818 100 aa3.92□□□□□ -1.78
BRIP1-202ENST00000577598 HNRNPA3P51991 378 aaKnown RBP3.92□□□□□ -1.78
BRIP1-202ENST00000577598 HBBP68871 147 aa3.92□□□□□ -1.78
BRIP1-202ENST00000577598 ATOH7Q8N100 152 aa3.92□□□□□ -1.78
BRIP1-202ENST00000577598 MMGT1Q8N4V1 131 aa3.92□□□□□ -1.78
BRIP1-202ENST00000577598 CMTM2Q8TAZ6 248 aa3.92□□□□□ -1.78
BRIP1-202ENST00000577598 ITLN2Q8WWU7 325 aaPredicted RBP3.92□□□□□ -1.78
BRIP1-202ENST00000577598 DEFB127Q9H1M4 99 aa3.92□□□□□ -1.78
BRIP1-202ENST00000577598 ROBO3Q96MS0 1386 aa3.91□□□□□ -1.78
BRIP1-202ENST00000577598 C9JQL5 133 aa3.91□□□□□ -1.78
BRIP1-202ENST00000577598 GNGT2O14610 69 aa3.91□□□□□ -1.78
BRIP1-202ENST00000577598 CST7O76096 145 aa3.91□□□□□ -1.78
BRIP1-202ENST00000577598 CECR9P0C854 216 aa3.91□□□□□ -1.78
BRIP1-202ENST00000577598 BCL2P10415 239 aa3.91□□□□□ -1.78
BRIP1-202ENST00000577598 TDGF1P3P51864 188 aa3.91□□□□□ -1.78
BRIP1-202ENST00000577598 ZNF136P52737 540 aa3.91□□□□□ -1.78
BRIP1-202ENST00000577598 FOXA3P55318 350 aaPredicted RBP3.91□□□□□ -1.78
BRIP1-202ENST00000577598 ATOH8Q96SQ7 321 aa3.91□□□□□ -1.78
BRIP1-202ENST00000577598 DSCAML1Q8TD84 2053 aa3.91□□□□□ -1.78
BRIP1-202ENST00000577598 IGKV1-39P01597 117 aa3.91□□□□□ -1.78
BRIP1-202ENST00000577598 IGKV1D-39P04432 117 aa3.91□□□□□ -1.78
BRIP1-202ENST00000577598 RPS4Y1P22090 263 aaKnown RBP3.91□□□□□ -1.78
BRIP1-202ENST00000577598 SNRPD3P62318 126 aaKnown RBP3.91□□□□□ -1.78
BRIP1-202ENST00000577598 KISS1Q15726 138 aa3.91□□□□□ -1.78
BRIP1-202ENST00000577598 NOXRED1Q6NXP6 359 aa3.91□□□□□ -1.78
BRIP1-202ENST00000577598 AMTNQ6UX39 209 aa3.91□□□□□ -1.78
BRIP1-202ENST00000577598 DPPA3Q6W0C5 159 aa3.91□□□□□ -1.78
BRIP1-202ENST00000577598 OR8A1Q8NGG7 326 aa3.91□□□□□ -1.78
BRIP1-202ENST00000577598 RPL36ALQ969Q0 106 aaKnown RBP3.91□□□□□ -1.78
BRIP1-202ENST00000577598 HYLS1Q96M11 299 aa3.91□□□□□ -1.78
BRIP1-202ENST00000577598 SDF2L1Q9HCN8 221 aa3.91□□□□□ -1.78
BRIP1-202ENST00000577598 SCN3AQ9NY46 2000 aa3.91□□□□□ -1.78
BRIP1-202ENST00000577598 TRAV5A0A0B4J249 113 aa3.91□□□□□ -1.78
BRIP1-202ENST00000577598 DNAJC9-AS1A6NH13 148 aa3.91□□□□□ -1.78
BRIP1-202ENST00000577598 K7ERS5 55 aa3.91□□□□□ -1.78
BRIP1-202ENST00000577598 LGALS3P17931 250 aaKnown RBP3.91□□□□□ -1.78
BRIP1-202ENST00000577598 CRYGSP22914 178 aa3.91□□□□□ -1.78
BRIP1-202ENST00000577598 SYNJ2BPP57105 145 aa3.91□□□□□ -1.78
BRIP1-202ENST00000577598 KIAA0040Q15053 153 aa3.91□□□□□ -1.78
BRIP1-202ENST00000577598 HAGHLQ6PII5 290 aaPredicted RBP3.91□□□□□ -1.78
BRIP1-202ENST00000577598 SPSB3Q6PJ21 355 aa3.91□□□□□ -1.78
BRIP1-202ENST00000577598 IZUMO2Q6UXV1 221 aa3.91□□□□□ -1.78
BRIP1-202ENST00000577598 BPIFB6Q8NFQ5 453 aa3.91□□□□□ -1.78
BRIP1-202ENST00000577598 OR4C16Q8NGL9 310 aa3.91□□□□□ -1.78
BRIP1-202ENST00000577598 FLVCR1-AS1Q8TAF5 88 aa3.91□□□□□ -1.78
BRIP1-202ENST00000577598 ZNF418Q8TF45 676 aaPredicted RBP3.91□□□□□ -1.78
BRIP1-202ENST00000577598 ORAOV1Q8WV07 137 aa3.91□□□□□ -1.78
BRIP1-202ENST00000577598 CHST6Q9GZX3 395 aa3.91□□□□□ -1.78
BRIP1-202ENST00000577598 RBM3P98179 157 aaKnown RBP3.9□□□□□ -1.78
BRIP1-202ENST00000577598 ATP5G2Q06055 141 aa3.9□□□□□ -1.78
BRIP1-202ENST00000577598 FAM57AQ8TBR7 257 aa3.9□□□□□ -1.78
BRIP1-202ENST00000577598 MMP26Q9NRE1 261 aa3.9□□□□□ -1.78
BRIP1-202ENST00000577598 SPANXA1Q9NS26 97 aa3.9□□□□□ -1.78
BRIP1-202ENST00000577598 CNTLNQ9NXG0 1405 aa3.9□□□□□ -1.78
BRIP1-202ENST00000577598 ZNF19P17023 458 aa3.9□□□□□ -1.79
BRIP1-202ENST00000577598 GPX2P18283 190 aa3.9□□□□□ -1.79
BRIP1-202ENST00000577598 AKR1C1Q04828 323 aa3.9□□□□□ -1.79
BRIP1-202ENST00000577598 GLYATL3Q5SZD4 288 aa3.9□□□□□ -1.79
BRIP1-202ENST00000577598 KLHDC8BQ8IXV7 354 aa3.9□□□□□ -1.79
BRIP1-202ENST00000577598 TAF15Q92804 592 aaKnown RBP eCLIP3.9□□□□□ -1.79
BRIP1-202ENST00000577598 PRELID3AQ96N28 172 aa3.9□□□□□ -1.79
BRIP1-202ENST00000577598 CCL13Q99616 98 aa3.9□□□□□ -1.79
BRIP1-202ENST00000577598 VGLL1Q99990 258 aa3.9□□□□□ -1.79
BRIP1-202ENST00000577598 SHANK2-AS3Q9BTD1 123 aa3.9□□□□□ -1.79
BRIP1-202ENST00000577598 SNHG12Q9BXW3 62 aa3.9□□□□□ -1.79
BRIP1-202ENST00000577598 FIS1Q9Y3D6 152 aa3.9□□□□□ -1.79
BRIP1-202ENST00000577598 ZDBF2Q9HCK1 2354 aa3.9□□□□□ -1.79
BRIP1-202ENST00000577598 ASCC3Q8N3C0 2202 aaKnown RBP3.9□□□□□ -1.79
BRIP1-202ENST00000577598 TRDV1A0A1B0GX56 115 aa3.9□□□□□ -1.79
BRIP1-202ENST00000577598 KRBOX1C9JBD0 128 aa3.9□□□□□ -1.79
BRIP1-202ENST00000577598 K7ENP7 123 aa3.9□□□□□ -1.79
BRIP1-202ENST00000577598 PSPHP1O15172 72 aa3.9□□□□□ -1.79
BRIP1-202ENST00000577598 IGLV2-8P01709 118 aa3.9□□□□□ -1.79
BRIP1-202ENST00000577598 HSD52Q0P140 79 aa3.9□□□□□ -1.79
BRIP1-202ENST00000577598 ZNF816Q0VGE8 651 aaPredicted RBP3.9□□□□□ -1.79
BRIP1-202ENST00000577598 C17orf58Q2M2W7 97 aa3.9□□□□□ -1.79
BRIP1-202ENST00000577598 RUSC1-AS1Q66K80 236 aa3.9□□□□□ -1.79
BRIP1-202ENST00000577598 SPTSSBQ8NFR3 76 aa3.9□□□□□ -1.79
BRIP1-202ENST00000577598 ATG5Q9H1Y0 275 aa3.9□□□□□ -1.79
BRIP1-202ENST00000577598 DPM3Q9P2X0 92 aa3.9□□□□□ -1.79
BRIP1-202ENST00000577598 CD300LBA8K4G0 201 aa3.89□□□□□ -1.79
BRIP1-202ENST00000577598 NTN3O00634 580 aaPredicted RBP3.89□□□□□ -1.79
BRIP1-202ENST00000577598 OVOL1O14753 267 aa3.89□□□□□ -1.79
BRIP1-202ENST00000577598 LEPROTO15243 131 aa3.89□□□□□ -1.79
BRIP1-202ENST00000577598 SETD5Q9C0A6 1442 aa3.89□□□□□ -1.79
BRIP1-202ENST00000577598 IGHV7-81A0A0B4J1V7 117 aa3.89□□□□□ -1.79
BRIP1-202ENST00000577598 TRAV17A0A0B4J275 112 aa3.89□□□□□ -1.79
BRIP1-202ENST00000577598 IGHV3-16A0A0C4DH30 117 aa3.89□□□□□ -1.79
BRIP1-202ENST00000577598 C9orf170A2RU37 121 aa3.89□□□□□ -1.79
BRIP1-202ENST00000577598 GADD45GO95257 159 aa3.89□□□□□ -1.79
BRIP1-202ENST00000577598 IGHV3-43DP0DP04 118 aa3.89□□□□□ -1.79
BRIP1-202ENST00000577598 MGST1P10620 155 aaKnown RBP3.89□□□□□ -1.79
BRIP1-202ENST00000577598 CCL14Q16627 93 aa3.89□□□□□ -1.79
BRIP1-202ENST00000577598 WBP1Q96G27 269 aa3.89□□□□□ -1.79
BRIP1-202ENST00000577598 IMMP2LQ96T52 175 aa3.89□□□□□ -1.79
BRIP1-202ENST00000577598 DSPPQ9NZW4 1301 aa3.89□□□□□ -1.79
BRIP1-202ENST00000577598 ARFGEF3Q5TH69 2177 aa3.89□□□□□ -1.79
BRIP1-202ENST00000577598 BORCS7-ASMTA0A0B4J1R7 106 aa3.89□□□□□ -1.79
BRIP1-202ENST00000577598 APOC3P02656 99 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms