RNA–Protein interactions for RNA: ENST00000573716.1

PRPF8-208, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-208ENST00000573716 TIMM50Q3ZCQ8 353 aa8.85□□□□□ -0.99
PRPF8-208ENST00000573716 LIPKQ5VXJ0 399 aa8.85□□□□□ -0.99
PRPF8-208ENST00000573716 SPSB3Q6PJ21 355 aa8.85□□□□□ -0.99
PRPF8-208ENST00000573716 MFSD4AQ8N468 514 aa8.85□□□□□ -0.99
PRPF8-208ENST00000573716 GIMAP1Q8WWP7 306 aa8.85□□□□□ -0.99
PRPF8-208ENST00000573716 CENPOQ9BU64 300 aa8.85□□□□□ -0.99
PRPF8-208ENST00000573716 RNF126Q9BV68 326 aa8.85□□□□□ -0.99
PRPF8-208ENST00000573716 MND1Q9BWT6 205 aa8.85□□□□□ -0.99
PRPF8-208ENST00000573716 COMMD5Q9GZQ3 224 aa8.85□□□□□ -0.99
PRPF8-208ENST00000573716 ETV7Q9Y603 341 aa8.85□□□□□ -0.99
PRPF8-208ENST00000573716 DNAH2Q9P225 4427 aa8.85□□□□□ -0.99
PRPF8-208ENST00000573716 DEFB131BA0A096LNP1 70 aa8.84□□□□□ -0.99
PRPF8-208ENST00000573716 TRAV3A0A0B4J244 114 aa8.84□□□□□ -0.99
PRPF8-208ENST00000573716 IGHV7-4-1A0A0J9YVY3 117 aa8.84□□□□□ -0.99
PRPF8-208ENST00000573716 CHEK1O14757 476 aa8.84□□□□□ -0.99
PRPF8-208ENST00000573716 IGLV2-14P01704 120 aa8.84□□□□□ -0.99
PRPF8-208ENST00000573716 HLA-DQB1P01920 261 aa8.84□□□□□ -0.99
PRPF8-208ENST00000573716 OR13C7P0DN81 318 aa8.84□□□□□ -0.99
PRPF8-208ENST00000573716 BRWD1-AS2P59051 145 aa8.84□□□□□ -0.99
PRPF8-208ENST00000573716 PAFAH1B2P68402 229 aa8.84□□□□□ -0.99
PRPF8-208ENST00000573716 UBE2DNLQ8IWF7 75 aa8.84□□□□□ -0.99
PRPF8-208ENST00000573716 C10orf67Q8IYJ2 551 aa8.84□□□□□ -0.99
PRPF8-208ENST00000573716 DHRSXQ8N5I4 330 aa8.84□□□□□ -0.99
PRPF8-208ENST00000573716 MAPKAPK5-AS1Q8N8E1 139 aa8.84□□□□□ -0.99
PRPF8-208ENST00000573716 GDPD1Q8N9F7 314 aa8.84□□□□□ -0.99
PRPF8-208ENST00000573716 HINT2Q9BX68 163 aa8.84□□□□□ -0.99
PRPF8-208ENST00000573716 S100A14Q9HCY8 104 aa8.84□□□□□ -0.99
PRPF8-208ENST00000573716 BET1LQ9NYM9 111 aa8.84□□□□□ -0.99
PRPF8-208ENST00000573716 C21orf62Q9NYP8 219 aa8.84□□□□□ -0.99
PRPF8-208ENST00000573716 ELF5Q9UKW6 265 aaPredicted RBP8.84□□□□□ -0.99
PRPF8-208ENST00000573716 DNAH17Q9UFH2 4485 aa8.83□□□□□ -1
PRPF8-208ENST00000573716 C15orf61A6NNL5 157 aa8.83□□□□□ -1
PRPF8-208ENST00000573716 C15orf62A8K5M9 175 aa8.83□□□□□ -1
PRPF8-208ENST00000573716 DNASE2O00115 360 aaPredicted RBP8.83□□□□□ -1
PRPF8-208ENST00000573716 ARL6IP5O75915 188 aa8.83□□□□□ -1
PRPF8-208ENST00000573716 IFNA10P01566 189 aa8.83□□□□□ -1
PRPF8-208ENST00000573716 CALRP27797 417 aaKnown RBP8.83□□□□□ -1
PRPF8-208ENST00000573716 DEFB131AP59861 70 aa8.83□□□□□ -1
PRPF8-208ENST00000573716 RPL11P62913 178 aaKnown RBP8.83□□□□□ -1
PRPF8-208ENST00000573716 IRF3Q14653 427 aa8.83□□□□□ -1
PRPF8-208ENST00000573716 STHQ8IWL8 128 aa8.83□□□□□ -1
PRPF8-208ENST00000573716 SPAG16Q8N0X2 631 aa8.83□□□□□ -1
PRPF8-208ENST00000573716 UFD1Q92890 307 aa8.83□□□□□ -1
PRPF8-208ENST00000573716 NDUFAF3Q9BU61 184 aa8.83□□□□□ -1
PRPF8-208ENST00000573716 QTRT1Q9BXR0 403 aaKnown RBP8.83□□□□□ -1
PRPF8-208ENST00000573716 V9GY05 133 aa8.83□□□□□ -1
PRPF8-208ENST00000573716 PKD1P98161 4303 aa8.83□□□□□ -1
PRPF8-208ENST00000573716 ELOA3CA0A087WX78 387 aaPredicted RBP8.82□□□□□ -1
PRPF8-208ENST00000573716 UPK2O00526 184 aa8.82□□□□□ -1
PRPF8-208ENST00000573716 LCE2BO14633 110 aa8.82□□□□□ -1
PRPF8-208ENST00000573716 NUPL2O15504 423 aaKnown RBP8.82□□□□□ -1
PRPF8-208ENST00000573716 AMBPP02760 352 aa8.82□□□□□ -1
PRPF8-208ENST00000573716 GNAO1P09471 354 aa8.82□□□□□ -1
PRPF8-208ENST00000573716 HSMCR30P0CW71 290 aa8.82□□□□□ -1
PRPF8-208ENST00000573716 MIFP14174 115 aa8.82□□□□□ -1
PRPF8-208ENST00000573716 RANBP1P43487 201 aa8.82□□□□□ -1
PRPF8-208ENST00000573716 RPS25P62851 125 aaKnown RBP8.82□□□□□ -1
PRPF8-208ENST00000573716 SPHARQ15513 63 aa8.82□□□□□ -1
PRPF8-208ENST00000573716 SSX1Q16384 188 aa8.82□□□□□ -1
PRPF8-208ENST00000573716 LGALS9BQ3B8N2 356 aa8.82□□□□□ -1
PRPF8-208ENST00000573716 SOHLH1Q5JUK2 328 aa8.82□□□□□ -1
PRPF8-208ENST00000573716 LAIR2Q6ISS4 152 aa8.82□□□□□ -1
PRPF8-208ENST00000573716 ZNF66Q6ZN08 573 aa8.82□□□□□ -1
PRPF8-208ENST00000573716 TMEM91Q6ZNR0 172 aa8.82□□□□□ -1
PRPF8-208ENST00000573716 Q6ZS49 121 aa8.82□□□□□ -1
PRPF8-208ENST00000573716 TCF24Q7RTU0 167 aa8.82□□□□□ -1
PRPF8-208ENST00000573716 C8orf59Q8N0T1 100 aaPredicted RBP8.82□□□□□ -1
PRPF8-208ENST00000573716 DMBX1Q8NFW5 382 aa8.82□□□□□ -1
PRPF8-208ENST00000573716 SCARB1Q8WTV0 552 aa8.82□□□□□ -1
PRPF8-208ENST00000573716 SECTM1Q8WVN6 248 aa8.82□□□□□ -1
PRPF8-208ENST00000573716 AIFM2Q9BRQ8 373 aa8.82□□□□□ -1
PRPF8-208ENST00000573716 SCRT1Q9BWW7 348 aa8.82□□□□□ -1
PRPF8-208ENST00000573716 AGRNO00468 2067 aa8.81□□□□□ -1
PRPF8-208ENST00000573716 ERICH4A6NGS2 130 aa8.81□□□□□ -1
PRPF8-208ENST00000573716 PTGES3LE9PB15 166 aa8.81□□□□□ -1
PRPF8-208ENST00000573716 SULT1C2O00338 296 aa8.81□□□□□ -1
PRPF8-208ENST00000573716 EIF4EP06730 217 aaKnown RBP8.81□□□□□ -1
PRPF8-208ENST00000573716 SERPINE2P07093 398 aa8.81□□□□□ -1
PRPF8-208ENST00000573716 CTXN2P0C2S0 81 aa8.81□□□□□ -1
PRPF8-208ENST00000573716 TRAPPC2P0DI81 140 aa8.81□□□□□ -1
PRPF8-208ENST00000573716 TRAPPC2BP0DI82 140 aa8.81□□□□□ -1
PRPF8-208ENST00000573716 DTYMKP23919 212 aa8.81□□□□□ -1
PRPF8-208ENST00000573716 RELQ04864 619 aaPredicted RBP8.81□□□□□ -1
PRPF8-208ENST00000573716 WT1-ASQ06250 92 aa8.81□□□□□ -1
PRPF8-208ENST00000573716 EIF4EBP1Q13541 118 aaPredicted RBP8.81□□□□□ -1
PRPF8-208ENST00000573716 SRSF8Q9BRL6 282 aaKnown RBP8.81□□□□□ -1
PRPF8-208ENST00000573716 ATG5Q9H1Y0 275 aa8.81□□□□□ -1
PRPF8-208ENST00000573716 CLEC5AQ9NY25 188 aa8.81□□□□□ -1
PRPF8-208ENST00000573716 RABAC1Q9UI14 185 aa8.81□□□□□ -1
PRPF8-208ENST00000573716 CELA1Q9UNI1 258 aa8.81□□□□□ -1
PRPF8-208ENST00000573716 DNAH11Q96DT5 4516 aa8.8□□□□□ -1
PRPF8-208ENST00000573716 TRAV14DV4A0A0A6YYC5 116 aa8.8□□□□□ -1
PRPF8-208ENST00000573716 IGHV3-66A0A0C4DH42 116 aa8.8□□□□□ -1
PRPF8-208ENST00000573716 METTL21EPA6NDL7 271 aa8.8□□□□□ -1
PRPF8-208ENST00000573716 C16orf90A8MZG2 172 aa8.8□□□□□ -1
PRPF8-208ENST00000573716 F8W735 103 aaPredicted RBP8.8□□□□□ -1
PRPF8-208ENST00000573716 ST8SIA3O43173 380 aa8.8□□□□□ -1
PRPF8-208ENST00000573716 IFNA21P01568 189 aa8.8□□□□□ -1
PRPF8-208ENST00000573716 IFNA17P01571 189 aa8.8□□□□□ -1
PRPF8-208ENST00000573716 NQO2P16083 231 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms