RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 F5P12259 2224 aa2.51□□□□□ -2.01
LINC00560-201ENST00000564593 INMT-MINDY4F8WBC2 141 aa2.51□□□□□ -2.01
LINC00560-201ENST00000564593 K7EN84 100 aa2.51□□□□□ -2.01
LINC00560-201ENST00000564593 M0R1B8 84 aa2.51□□□□□ -2.01
LINC00560-201ENST00000564593 SULT1B1O43704 296 aa2.51□□□□□ -2.01
LINC00560-201ENST00000564593 KCNK2O95069 426 aa2.51□□□□□ -2.01
LINC00560-201ENST00000564593 AHSA1O95433 338 aa2.51□□□□□ -2.01
LINC00560-201ENST00000564593 GPR75O95800 540 aa2.51□□□□□ -2.01
LINC00560-201ENST00000564593 TNFP01375 233 aa2.51□□□□□ -2.01
LINC00560-201ENST00000564593 LIMS3P0CW19 117 aa2.51□□□□□ -2.01
LINC00560-201ENST00000564593 LIMS4P0CW20 117 aa2.51□□□□□ -2.01
LINC00560-201ENST00000564593 IFI30P13284 250 aa2.51□□□□□ -2.01
LINC00560-201ENST00000564593 TGFBR1P36897 503 aa2.51□□□□□ -2.01
LINC00560-201ENST00000564593 ACTR1BP42025 376 aa2.51□□□□□ -2.01
LINC00560-201ENST00000564593 OMPP47874 163 aa2.51□□□□□ -2.01
LINC00560-201ENST00000564593 EVX1P49640 407 aa2.51□□□□□ -2.01
LINC00560-201ENST00000564593 RAB38P57729 211 aa2.51□□□□□ -2.01
LINC00560-201ENST00000564593 ACTBP60709 375 aa2.51□□□□□ -2.01
LINC00560-201ENST00000564593 RRAS2P62070 204 aaPredicted RBP2.51□□□□□ -2.01
LINC00560-201ENST00000564593 RPS25P62851 125 aaKnown RBP2.51□□□□□ -2.01
LINC00560-201ENST00000564593 ACTG1P63261 375 aa2.51□□□□□ -2.01
LINC00560-201ENST00000564593 SSBP1Q04837 148 aaKnown RBP2.51□□□□□ -2.01
LINC00560-201ENST00000564593 PMVKQ15126 192 aa2.51□□□□□ -2.01
LINC00560-201ENST00000564593 CLEC12AQ5QGZ9 265 aa2.51□□□□□ -2.01
LINC00560-201ENST00000564593 MRPL2Q5T653 305 aaKnown RBP2.51□□□□□ -2.01
LINC00560-201ENST00000564593 KPRPQ5T749 579 aaPredicted RBP2.51□□□□□ -2.01
LINC00560-201ENST00000564593 SFXN4Q6P4A7 337 aa2.51□□□□□ -2.01
LINC00560-201ENST00000564593 RPL22L1Q6P5R6 122 aaKnown RBP2.51□□□□□ -2.01
LINC00560-201ENST00000564593 TOMM5Q8N4H5 51 aa2.51□□□□□ -2.01
LINC00560-201ENST00000564593 SMIM19Q96E16 107 aa2.51□□□□□ -2.01
LINC00560-201ENST00000564593 ERMAPQ96PL5 475 aaPredicted RBP2.51□□□□□ -2.01
LINC00560-201ENST00000564593 MRPL20Q9BYC9 149 aaKnown RBP2.51□□□□□ -2.01
LINC00560-201ENST00000564593 COMMD3Q9UBI1 195 aa2.51□□□□□ -2.01
LINC00560-201ENST00000564593 DHCR7Q9UBM7 475 aaKnown RBP2.51□□□□□ -2.01
LINC00560-201ENST00000564593 CKLFQ9UBR5 152 aa2.51□□□□□ -2.01
LINC00560-201ENST00000564593 PRO0628Q9UI54 55 aa2.51□□□□□ -2.01
LINC00560-201ENST00000564593 ZNF337Q9Y3M9 751 aa2.51□□□□□ -2.01
LINC00560-201ENST00000564593 URGCP-MRPS24S4R325 110 aa2.51□□□□□ -2.01
LINC00560-201ENST00000564593 ATG2BQ96BY7 2078 aa2.5□□□□□ -2.01
LINC00560-201ENST00000564593 A0A1B0GX12 115 aa2.5□□□□□ -2.01
LINC00560-201ENST00000564593 OR6C70A6NIJ9 312 aa2.5□□□□□ -2.01
LINC00560-201ENST00000564593 TMEM212A6NML5 194 aa2.5□□□□□ -2.01
LINC00560-201ENST00000564593 KLRC4-KLRK1H3BQV0 150 aa2.5□□□□□ -2.01
LINC00560-201ENST00000564593 M0R129 80 aa2.5□□□□□ -2.01
LINC00560-201ENST00000564593 BHLHE40O14503 412 aa2.5□□□□□ -2.01
LINC00560-201ENST00000564593 GSTZ1O43708 216 aaPredicted RBP2.5□□□□□ -2.01
LINC00560-201ENST00000564593 NOS1APO75052 506 aaPredicted RBP2.5□□□□□ -2.01
LINC00560-201ENST00000564593 CD2P06729 351 aa2.5□□□□□ -2.01
LINC00560-201ENST00000564593 GP1BAP07359 652 aa2.5□□□□□ -2.01
LINC00560-201ENST00000564593 CTSEP14091 401 aa2.5□□□□□ -2.01
LINC00560-201ENST00000564593 UGT2B7P16662 529 aa2.5□□□□□ -2.01
LINC00560-201ENST00000564593 SLC6A1P30531 599 aa2.5□□□□□ -2.01
LINC00560-201ENST00000564593 RCVRNP35243 200 aa2.5□□□□□ -2.01
LINC00560-201ENST00000564593 TGM4P49221 684 aa2.5□□□□□ -2.01
LINC00560-201ENST00000564593 AP2S1P53680 142 aaPredicted RBP2.5□□□□□ -2.01
LINC00560-201ENST00000564593 ARPC4P59998 168 aa2.5□□□□□ -2.01
LINC00560-201ENST00000564593 RAB8AP61006 207 aa2.5□□□□□ -2.01
LINC00560-201ENST00000564593 FABP5Q01469 135 aa2.5□□□□□ -2.01
LINC00560-201ENST00000564593 ZNF791Q3KP31 576 aaPredicted RBP2.5□□□□□ -2.01
LINC00560-201ENST00000564593 DEFB134Q4QY38 66 aa2.5□□□□□ -2.01
LINC00560-201ENST00000564593 IDNKQ5T6J7 187 aa2.5□□□□□ -2.01
LINC00560-201ENST00000564593 DNM1P34Q6PK57 102 aa2.5□□□□□ -2.01
LINC00560-201ENST00000564593 C16orf47Q6ZP98 133 aaPredicted RBP2.5□□□□□ -2.01
LINC00560-201ENST00000564593 C2orf73Q8N5S3 287 aaPredicted RBP2.5□□□□□ -2.01
LINC00560-201ENST00000564593 SLC26A10Q8NG04 563 aa2.5□□□□□ -2.01
LINC00560-201ENST00000564593 OR2T4Q8NH00 348 aa2.5□□□□□ -2.01
LINC00560-201ENST00000564593 ASB17Q8WXJ9 295 aa2.5□□□□□ -2.01
LINC00560-201ENST00000564593 TMEM203Q969S6 136 aa2.5□□□□□ -2.01
LINC00560-201ENST00000564593 S100A16Q96FQ6 103 aaKnown RBP2.5□□□□□ -2.01
LINC00560-201ENST00000564593 DERL3Q96Q80 235 aa2.5□□□□□ -2.01
LINC00560-201ENST00000564593 METTL26Q96S19 204 aa2.5□□□□□ -2.01
LINC00560-201ENST00000564593 SDF2Q99470 211 aa2.5□□□□□ -2.01
LINC00560-201ENST00000564593 PDCD1LG2Q9BQ51 273 aa2.5□□□□□ -2.01
LINC00560-201ENST00000564593 BEX2Q9BXY8 128 aa2.5□□□□□ -2.01
LINC00560-201ENST00000564593 ABCG5Q9H222 651 aa2.5□□□□□ -2.01
LINC00560-201ENST00000564593 INIPQ9NRY2 104 aa2.5□□□□□ -2.01
LINC00560-201ENST00000564593 PAQR5Q9NXK6 330 aaPredicted RBP2.5□□□□□ -2.01
LINC00560-201ENST00000564593 MAT2BQ9NZL9 334 aa2.5□□□□□ -2.01
LINC00560-201ENST00000564593 SLC23A2Q9UGH3 650 aa2.5□□□□□ -2.01
LINC00560-201ENST00000564593 NAGKQ9UJ70 344 aa2.5□□□□□ -2.01
LINC00560-201ENST00000564593 MMACHCQ9Y4U1 282 aa2.5□□□□□ -2.01
LINC00560-201ENST00000564593 THADAQ6YHU6 1953 aa2.5□□□□□ -2.01
LINC00560-201ENST00000564593 A0A0A6YYH2 397 aa2.49□□□□□ -2.01
LINC00560-201ENST00000564593 A0A1B0GWA3 101 aa2.49□□□□□ -2.01
LINC00560-201ENST00000564593 A6NJ64 397 aa2.49□□□□□ -2.01
LINC00560-201ENST00000564593 GABARAPH6UMI1 98 aa2.49□□□□□ -2.01
LINC00560-201ENST00000564593 M0R233 179 aa2.49□□□□□ -2.01
LINC00560-201ENST00000564593 AIPO00170 330 aa2.49□□□□□ -2.01
LINC00560-201ENST00000564593 SSNA1O43805 119 aa2.49□□□□□ -2.01
LINC00560-201ENST00000564593 CREBL2O60519 120 aaPredicted RBP2.49□□□□□ -2.01
LINC00560-201ENST00000564593 HPGDSO60760 199 aa2.49□□□□□ -2.01
LINC00560-201ENST00000564593 OR2B3O76000 313 aa2.49□□□□□ -2.01
LINC00560-201ENST00000564593 NSA2O95478 260 aaKnown RBP2.49□□□□□ -2.01
LINC00560-201ENST00000564593 IGKV1D-16P01601 117 aa2.49□□□□□ -2.01
LINC00560-201ENST00000564593 IGLV7-43P04211 117 aa2.49□□□□□ -2.01
LINC00560-201ENST00000564593 UCHL1P09936 223 aa2.49□□□□□ -2.01
LINC00560-201ENST00000564593 PYCR1P32322 319 aa2.49□□□□□ -2.01
LINC00560-201ENST00000564593 GABRA3P34903 492 aa2.49□□□□□ -2.01
LINC00560-201ENST00000564593 ATP5G2Q06055 141 aa2.49□□□□□ -2.01
LINC00560-201ENST00000564593 FAM53BQ14153 422 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms