RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 HNF4GQ14541 408 aa7.63□□□□□ -1.19
LINC00838-201ENST00000562956 KHDC3LQ587J8 217 aa7.63□□□□□ -1.19
LINC00838-201ENST00000562956 FAM71F2Q6NXP2 309 aa7.63□□□□□ -1.19
LINC00838-201ENST00000562956 REC114Q7Z4M0 266 aa7.63□□□□□ -1.19
LINC00838-201ENST00000562956 LY6G5BQ8NDX9 201 aa7.63□□□□□ -1.19
LINC00838-201ENST00000562956 HARBI1Q96MB7 349 aa7.63□□□□□ -1.19
LINC00838-201ENST00000562956 HEYLQ9NQ87 328 aaPredicted RBP7.63□□□□□ -1.19
LINC00838-201ENST00000562956 ONECUT1Q9UBC0 465 aa7.63□□□□□ -1.19
LINC00838-201ENST00000562956 UPK2O00526 184 aa7.63□□□□□ -1.19
LINC00838-201ENST00000562956 RRHO14718 337 aa7.63□□□□□ -1.19
LINC00838-201ENST00000562956 IFNA10P01566 189 aa7.63□□□□□ -1.19
LINC00838-201ENST00000562956 IGLV1-47P01700 117 aa7.63□□□□□ -1.19
LINC00838-201ENST00000562956 SNCAP37840 140 aa7.63□□□□□ -1.19
LINC00838-201ENST00000562956 GNB2P62879 340 aa7.63□□□□□ -1.19
LINC00838-201ENST00000562956 AKR1C8PQ5T2L2 129 aa7.63□□□□□ -1.19
LINC00838-201ENST00000562956 RARRES2Q99969 163 aa7.63□□□□□ -1.19
LINC00838-201ENST00000562956 PARD6GQ9BYG4 376 aaPredicted RBP7.63□□□□□ -1.19
LINC00838-201ENST00000562956 HIPK2Q9H2X6 1198 aa7.63□□□□□ -1.19
LINC00838-201ENST00000562956 PATZ1Q9HBE1 687 aaKnown RBP7.63□□□□□ -1.19
LINC00838-201ENST00000562956 OR51B2Q9Y5P1 312 aa7.63□□□□□ -1.19
LINC00838-201ENST00000562956 MALRD1Q5VYJ5 2156 aa7.62□□□□□ -1.19
LINC00838-201ENST00000562956 TGIF2-C20orf24A0A0A6YYL0 155 aa7.62□□□□□ -1.19
LINC00838-201ENST00000562956 TSTD3H0UI37 97 aa7.62□□□□□ -1.19
LINC00838-201ENST00000562956 OPN1MWP04001 364 aa7.62□□□□□ -1.19
LINC00838-201ENST00000562956 CXCL1P09341 107 aa7.62□□□□□ -1.19
LINC00838-201ENST00000562956 OPN1MW2P0DN77 364 aa7.62□□□□□ -1.19
LINC00838-201ENST00000562956 OPN1MW3P0DN78 364 aa7.62□□□□□ -1.19
LINC00838-201ENST00000562956 HIST1H1BP16401 226 aaKnown RBP7.62□□□□□ -1.19
LINC00838-201ENST00000562956 HSPE1P61604 102 aaKnown RBP7.62□□□□□ -1.19
LINC00838-201ENST00000562956 OSR1Q8TAX0 266 aaPredicted RBP7.62□□□□□ -1.19
LINC00838-201ENST00000562956 TMEM170AQ8WVE7 144 aa7.62□□□□□ -1.19
LINC00838-201ENST00000562956 TAF15Q92804 592 aaKnown RBP eCLIP7.62□□□□□ -1.19
LINC00838-201ENST00000562956 LHX4Q969G2 390 aa7.62□□□□□ -1.19
LINC00838-201ENST00000562956 PINX1Q96BK5 328 aaKnown RBP7.62□□□□□ -1.19
LINC00838-201ENST00000562956 FLYWCH2Q96CP2 140 aaKnown RBP7.62□□□□□ -1.19
LINC00838-201ENST00000562956 TMEM147Q9BVK8 224 aa7.62□□□□□ -1.19
LINC00838-201ENST00000562956 VSIRQ9H7M9 311 aa7.62□□□□□ -1.19
LINC00838-201ENST00000562956 TACC2O95359 2948 aa7.62□□□□□ -1.19
LINC00838-201ENST00000562956 RBP4P02753 201 aa7.62□□□□□ -1.19
LINC00838-201ENST00000562956 TRGC2P03986 189 aa7.62□□□□□ -1.19
LINC00838-201ENST00000562956 LIPFP07098 398 aa7.62□□□□□ -1.19
LINC00838-201ENST00000562956 COX7A1P24310 79 aa7.62□□□□□ -1.19
LINC00838-201ENST00000562956 ATP6V1FQ16864 119 aa7.62□□□□□ -1.19
LINC00838-201ENST00000562956 HLA-DRB5Q30154 266 aa7.62□□□□□ -1.19
LINC00838-201ENST00000562956 TMEM177Q53S58 311 aa7.62□□□□□ -1.19
LINC00838-201ENST00000562956 Q8N7P7 452 aa7.62□□□□□ -1.19
LINC00838-201ENST00000562956 RITA1Q96K30 269 aa7.62□□□□□ -1.19
LINC00838-201ENST00000562956 SSBP3Q9BWW4 388 aaPredicted RBP7.62□□□□□ -1.19
LINC00838-201ENST00000562956 CLEC7AQ9BXN2 247 aa7.62□□□□□ -1.19
LINC00838-201ENST00000562956 PRNDQ9UKY0 176 aa7.62□□□□□ -1.19
LINC00838-201ENST00000562956 CACNA1BQ00975 2339 aa7.62□□□□□ -1.19
LINC00838-201ENST00000562956 IGHV3-72A0A0B4J1Y9 119 aa7.62□□□□□ -1.19
LINC00838-201ENST00000562956 PPP1R2P9O14990 202 aa7.62□□□□□ -1.19
LINC00838-201ENST00000562956 CYB5BO43169 146 aa7.62□□□□□ -1.19
LINC00838-201ENST00000562956 PAX6P26367 422 aa7.62□□□□□ -1.19
LINC00838-201ENST00000562956 GPR6P46095 362 aaPredicted RBP7.62□□□□□ -1.19
LINC00838-201ENST00000562956 PRRX1P54821 245 aa7.62□□□□□ -1.19
LINC00838-201ENST00000562956 CCL20P78556 96 aa7.62□□□□□ -1.19
LINC00838-201ENST00000562956 VWC2Q2TAL6 325 aa7.62□□□□□ -1.19
LINC00838-201ENST00000562956 PDPNQ86YL7 162 aa7.62□□□□□ -1.19
LINC00838-201ENST00000562956 OR4C13Q8NGP0 309 aa7.62□□□□□ -1.19
LINC00838-201ENST00000562956 TNFRSF14Q92956 283 aa7.62□□□□□ -1.19
LINC00838-201ENST00000562956 TMEM68Q96MH6 324 aa7.62□□□□□ -1.19
LINC00838-201ENST00000562956 PSMG3Q9BT73 122 aaPredicted RBP7.62□□□□□ -1.19
LINC00838-201ENST00000562956 SCRT1Q9BWW7 348 aa7.62□□□□□ -1.19
LINC00838-201ENST00000562956 HINT2Q9BX68 163 aa7.62□□□□□ -1.19
LINC00838-201ENST00000562956 BET1LQ9NYM9 111 aa7.62□□□□□ -1.19
LINC00838-201ENST00000562956 BUB1B-PAK6H3BSN5 160 aa7.61□□□□□ -1.19
LINC00838-201ENST00000562956 KBTBD11O94819 623 aa7.61□□□□□ -1.19
LINC00838-201ENST00000562956 IL3RAP26951 378 aa7.61□□□□□ -1.19
LINC00838-201ENST00000562956 EFNA4P52798 201 aa7.61□□□□□ -1.19
LINC00838-201ENST00000562956 ARF6P62330 175 aa7.61□□□□□ -1.19
LINC00838-201ENST00000562956 RPP30P78346 268 aaKnown RBP7.61□□□□□ -1.19
LINC00838-201ENST00000562956 SPSB3Q6PJ21 355 aa7.61□□□□□ -1.19
LINC00838-201ENST00000562956 PCGF1Q9BSM1 259 aa7.61□□□□□ -1.19
LINC00838-201ENST00000562956 RPRMQ9NS64 109 aa7.61□□□□□ -1.19
LINC00838-201ENST00000562956 WASHC3Q9Y3C0 194 aa7.61□□□□□ -1.19
LINC00838-201ENST00000562956 LOC105371242A0A075B767 164 aa7.61□□□□□ -1.19
LINC00838-201ENST00000562956 TEX50A0A1B0GTY4 177 aa7.61□□□□□ -1.19
LINC00838-201ENST00000562956 ZNF705GA8MUZ8 300 aaPredicted RBP7.61□□□□□ -1.19
LINC00838-201ENST00000562956 PRSS46E5RG02 174 aa7.61□□□□□ -1.19
LINC00838-201ENST00000562956 HIST1H2BKO60814 126 aa7.61□□□□□ -1.19
LINC00838-201ENST00000562956 IGLV2-23P01705 113 aa7.61□□□□□ -1.19
LINC00838-201ENST00000562956 HIST1H2BJP06899 126 aa7.61□□□□□ -1.19
LINC00838-201ENST00000562956 FGF7P21781 194 aa7.61□□□□□ -1.19
LINC00838-201ENST00000562956 HIST1H2BOP23527 126 aa7.61□□□□□ -1.19
LINC00838-201ENST00000562956 HIST1H2BBP33778 126 aa7.61□□□□□ -1.19
LINC00838-201ENST00000562956 HIST1H2BDP58876 126 aa7.61□□□□□ -1.19
LINC00838-201ENST00000562956 HIST1H2BCP62807 126 aa7.61□□□□□ -1.19
LINC00838-201ENST00000562956 HIST2H2BEQ16778 126 aa7.61□□□□□ -1.19
LINC00838-201ENST00000562956 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.61□□□□□ -1.19
LINC00838-201ENST00000562956 PNKDQ8N490 385 aa7.61□□□□□ -1.19
LINC00838-201ENST00000562956 BEND2Q8NDZ0 799 aa7.61□□□□□ -1.19
LINC00838-201ENST00000562956 OR4P4Q8NGL7 312 aa7.61□□□□□ -1.19
LINC00838-201ENST00000562956 Q8WTZ3 238 aa7.61□□□□□ -1.19
LINC00838-201ENST00000562956 HIST1H2BHQ93079 126 aa7.61□□□□□ -1.19
LINC00838-201ENST00000562956 HIST1H2BNQ99877 126 aa7.61□□□□□ -1.19
LINC00838-201ENST00000562956 HIST1H2BMQ99879 126 aa7.61□□□□□ -1.19
LINC00838-201ENST00000562956 ZNF257Q9Y2Q1 563 aa7.61□□□□□ -1.19
LINC00838-201ENST00000562956 FLNCQ14315 2725 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms