RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 IFNA6P05013 189 aa9.48□□□□□ -0.89
SMAD3-208ENST00000558827 FOLR2P14207 255 aa9.48□□□□□ -0.89
SMAD3-208ENST00000558827 GPR183P32249 361 aa9.48□□□□□ -0.89
SMAD3-208ENST00000558827 MECP2P51608 486 aaKnown RBP9.48□□□□□ -0.89
SMAD3-208ENST00000558827 PPP5CP53041 499 aa9.48□□□□□ -0.89
SMAD3-208ENST00000558827 MFAP2P55001 183 aa9.48□□□□□ -0.89
SMAD3-208ENST00000558827 WT1-ASQ06250 92 aa9.48□□□□□ -0.89
SMAD3-208ENST00000558827 SPINK9Q5DT21 86 aa9.48□□□□□ -0.89
SMAD3-208ENST00000558827 SGPP2Q8IWX5 399 aa9.48□□□□□ -0.89
SMAD3-208ENST00000558827 OR4D10Q8NGI6 311 aa9.48□□□□□ -0.89
SMAD3-208ENST00000558827 OR1L8Q8NGR8 309 aa9.48□□□□□ -0.89
SMAD3-208ENST00000558827 AP3S1Q92572 193 aa9.48□□□□□ -0.89
SMAD3-208ENST00000558827 BORCS5Q969J3 196 aa9.48□□□□□ -0.89
SMAD3-208ENST00000558827 WFDC10AQ9H1F0 79 aa9.48□□□□□ -0.89
SMAD3-208ENST00000558827 PLEKHA3Q9HB20 300 aa9.48□□□□□ -0.89
SMAD3-208ENST00000558827 IGHV3OR16-8A0A075B7F1 116 aa9.47□□□□□ -0.89
SMAD3-208ENST00000558827 IGKV1-39P01597 117 aa9.47□□□□□ -0.89
SMAD3-208ENST00000558827 IGKV1D-39P04432 117 aa9.47□□□□□ -0.89
SMAD3-208ENST00000558827 HIST1H1BP16401 226 aaKnown RBP9.47□□□□□ -0.89
SMAD3-208ENST00000558827 DEFB114Q30KQ6 69 aa9.47□□□□□ -0.89
SMAD3-208ENST00000558827 TM4SF20Q53R12 229 aa9.47□□□□□ -0.89
SMAD3-208ENST00000558827 RNASE10Q5GAN6 216 aaKnown RBP9.47□□□□□ -0.89
SMAD3-208ENST00000558827 LCN12Q6JVE5 192 aa9.47□□□□□ -0.89
SMAD3-208ENST00000558827 FAAP20Q6NZ36 180 aa9.47□□□□□ -0.89
SMAD3-208ENST00000558827 UNQ9165/PRO28630Q6UXU0 137 aa9.47□□□□□ -0.89
SMAD3-208ENST00000558827 LAX1Q8IWV1 398 aa9.47□□□□□ -0.89
SMAD3-208ENST00000558827 WDR89Q96FK6 387 aaPredicted RBP9.47□□□□□ -0.89
SMAD3-208ENST00000558827 TUBA4BQ9H853 241 aa9.47□□□□□ -0.89
SMAD3-208ENST00000558827 OR2T8A6NH00 312 aa9.46□□□□□ -0.9
SMAD3-208ENST00000558827 ZNF785A8K8V0 405 aa9.46□□□□□ -0.9
SMAD3-208ENST00000558827 IGHV3-48P01763 117 aa9.46□□□□□ -0.9
SMAD3-208ENST00000558827 SERPINE2P07093 398 aa9.46□□□□□ -0.9
SMAD3-208ENST00000558827 CD7P09564 240 aa9.46□□□□□ -0.9
SMAD3-208ENST00000558827 S100GP29377 79 aa9.46□□□□□ -0.9
SMAD3-208ENST00000558827 CD81P60033 236 aa9.46□□□□□ -0.9
SMAD3-208ENST00000558827 SP6Q3SY56 376 aa9.46□□□□□ -0.9
SMAD3-208ENST00000558827 SCGB2B2Q4G0G5 96 aa9.46□□□□□ -0.9
SMAD3-208ENST00000558827 LPCAT3Q6P1A2 487 aa9.46□□□□□ -0.9
SMAD3-208ENST00000558827 SLC38A6Q8IZM9 456 aa9.46□□□□□ -0.9
SMAD3-208ENST00000558827 Q8N402 240 aa9.46□□□□□ -0.9
SMAD3-208ENST00000558827 MRGPRFQ96AM1 343 aa9.46□□□□□ -0.9
SMAD3-208ENST00000558827 NDUFA4L2Q9NRX3 87 aa9.46□□□□□ -0.9
SMAD3-208ENST00000558827 C19orf73Q9NVV2 129 aa9.46□□□□□ -0.9
SMAD3-208ENST00000558827 MTFP1Q9UDX5 166 aa9.46□□□□□ -0.9
SMAD3-208ENST00000558827 ZNF207O43670 478 aaKnown RBP9.45□□□□□ -0.9
SMAD3-208ENST00000558827 SCAF4O95104 1147 aaKnown RBP9.45□□□□□ -0.9
SMAD3-208ENST00000558827 CBLN1P23435 193 aa9.45□□□□□ -0.9
SMAD3-208ENST00000558827 PIGPP57054 158 aa9.45□□□□□ -0.9
SMAD3-208ENST00000558827 FAM106AQ4KMX7 169 aa9.45□□□□□ -0.9
SMAD3-208ENST00000558827 PLET1Q6UQ28 207 aa9.45□□□□□ -0.9
SMAD3-208ENST00000558827 H2BFWTQ7Z2G1 175 aa9.45□□□□□ -0.9
SMAD3-208ENST00000558827 GTSCR1Q86UQ5 136 aa9.45□□□□□ -0.9
SMAD3-208ENST00000558827 GPHB5Q86YW7 130 aa9.45□□□□□ -0.9
SMAD3-208ENST00000558827 DEFB125Q8N687 156 aa9.45□□□□□ -0.9
SMAD3-208ENST00000558827 GDPD1Q8N9F7 314 aa9.45□□□□□ -0.9
SMAD3-208ENST00000558827 UBAC2Q8NBM4 344 aa9.45□□□□□ -0.9
SMAD3-208ENST00000558827 UXS1Q8NBZ7 420 aa9.45□□□□□ -0.9
SMAD3-208ENST00000558827 OR4A16Q8NH70 328 aa9.45□□□□□ -0.9
SMAD3-208ENST00000558827 ZNF502Q8TBZ5 544 aa9.45□□□□□ -0.9
SMAD3-208ENST00000558827 CXorf58Q96LI9 332 aa9.45□□□□□ -0.9
SMAD3-208ENST00000558827 THAP7Q9BT49 309 aaPredicted RBP9.45□□□□□ -0.9
SMAD3-208ENST00000558827 ZMAT4Q9H898 229 aa9.45□□□□□ -0.9
SMAD3-208ENST00000558827 RETNQ9HD89 108 aa9.45□□□□□ -0.9
SMAD3-208ENST00000558827 KMT2CQ8NEZ4 4911 aaKnown RBP9.45□□□□□ -0.9
SMAD3-208ENST00000558827 TRBV7-1A0A0A6YYK4 115 aa9.44□□□□□ -0.9
SMAD3-208ENST00000558827 TMEM213A2RRL7 107 aa9.44□□□□□ -0.9
SMAD3-208ENST00000558827 RAB3DO95716 219 aa9.44□□□□□ -0.9
SMAD3-208ENST00000558827 UCP3P55916 312 aa9.44□□□□□ -0.9
SMAD3-208ENST00000558827 HAGHQ16775 308 aa9.44□□□□□ -0.9
SMAD3-208ENST00000558827 BTNL8Q6UX41 500 aa9.44□□□□□ -0.9
SMAD3-208ENST00000558827 MARCH1Q8TCQ1 289 aa9.44□□□□□ -0.9
SMAD3-208ENST00000558827 LSM10Q969L4 123 aaKnown RBP9.44□□□□□ -0.9
SMAD3-208ENST00000558827 MISP3Q96FF7 219 aa9.44□□□□□ -0.9
SMAD3-208ENST00000558827 SEC22AQ96IW7 307 aa9.44□□□□□ -0.9
SMAD3-208ENST00000558827 TP53RKQ96S44 253 aa9.44□□□□□ -0.9
SMAD3-208ENST00000558827 NEURL2Q9BR09 285 aa9.44□□□□□ -0.9
SMAD3-208ENST00000558827 SIGLEC8Q9NYZ4 499 aa9.44□□□□□ -0.9
SMAD3-208ENST00000558827 MLXQ9UH92 298 aa9.44□□□□□ -0.9
SMAD3-208ENST00000558827 PRNDQ9UKY0 176 aa9.44□□□□□ -0.9
SMAD3-208ENST00000558827 F11RQ9Y624 299 aaKnown RBP9.44□□□□□ -0.9
SMAD3-208ENST00000558827 C15orf61A6NNL5 157 aa9.43□□□□□ -0.9
SMAD3-208ENST00000558827 LGALS9O00182 355 aa9.43□□□□□ -0.9
SMAD3-208ENST00000558827 IGKV1-5P01602 117 aa9.43□□□□□ -0.9
SMAD3-208ENST00000558827 PTBP1P26599 531 aaKnown RBP eCLIP9.43□□□□□ -0.91e-7■□□□□ 8.8
SMAD3-208ENST00000558827 IL18Q14116 193 aa9.43□□□□□ -0.9
SMAD3-208ENST00000558827 KLK9Q2XQG4 91 aa9.43□□□□□ -0.9
SMAD3-208ENST00000558827 Q56UQ5 140 aa9.43□□□□□ -0.9
SMAD3-208ENST00000558827 FAM209BQ5JX69 171 aa9.43□□□□□ -0.9
SMAD3-208ENST00000558827 STEAP1BQ6NZ63 245 aa9.43□□□□□ -0.9
SMAD3-208ENST00000558827 LHFPL1Q86WI0 220 aa9.43□□□□□ -0.9
SMAD3-208ENST00000558827 TMEM61Q8N0U2 210 aa9.43□□□□□ -0.9
SMAD3-208ENST00000558827 TMEM229BQ8NBD8 167 aa9.43□□□□□ -0.9
SMAD3-208ENST00000558827 OR13C8Q8NGS7 320 aa9.43□□□□□ -0.9
SMAD3-208ENST00000558827 SCARB1Q8WTV0 552 aa9.43□□□□□ -0.9
SMAD3-208ENST00000558827 DIRAS2Q96HU8 199 aa9.43□□□□□ -0.9
SMAD3-208ENST00000558827 CHRDL1Q9BU40 450 aa9.43□□□□□ -0.9
SMAD3-208ENST00000558827 C20orf24Q9BUV8 137 aa9.43□□□□□ -0.9
SMAD3-208ENST00000558827 C6orf62Q9GZU0 229 aaPredicted RBP9.43□□□□□ -0.9
SMAD3-208ENST00000558827 THYN1Q9P016 225 aa9.43□□□□□ -0.9
SMAD3-208ENST00000558827 KLK9Q9UKQ9 250 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms