RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 CD33P20138 364 aa5.68□□□□□ -1.5
LINC-ROR-201ENST00000553704 LYG1Q8N1E2 194 aa5.68□□□□□ -1.5
LINC-ROR-201ENST00000553704 FAM216BQ8N7L0 139 aa5.68□□□□□ -1.5
LINC-ROR-201ENST00000553704 ZNF439Q8NDP4 499 aa5.68□□□□□ -1.5
LINC-ROR-201ENST00000553704 DEFB124Q8NES8 71 aa5.68□□□□□ -1.5
LINC-ROR-201ENST00000553704 ZCCHC14Q8WYQ9 949 aaKnown RBP5.68□□□□□ -1.5
LINC-ROR-201ENST00000553704 TMEM18Q96B42 140 aa5.68□□□□□ -1.5
LINC-ROR-201ENST00000553704 FOXA2Q9Y261 457 aaPredicted RBP5.68□□□□□ -1.5
LINC-ROR-201ENST00000553704 AKAP13Q12802 2813 aa5.68□□□□□ -1.5
LINC-ROR-201ENST00000553704 GCGP01275 180 aa5.67□□□□□ -1.5
LINC-ROR-201ENST00000553704 IGKV1-16P04430 117 aa5.67□□□□□ -1.5
LINC-ROR-201ENST00000553704 LINC00869P0C866 280 aa5.67□□□□□ -1.5
LINC-ROR-201ENST00000553704 GATA2P23769 480 aaPredicted RBP5.67□□□□□ -1.5
LINC-ROR-201ENST00000553704 KLF3P57682 345 aaPredicted RBP5.67□□□□□ -1.5
LINC-ROR-201ENST00000553704 RPP30P78346 268 aaKnown RBP5.67□□□□□ -1.5
LINC-ROR-201ENST00000553704 PRR20EP86478 221 aa5.67□□□□□ -1.5
LINC-ROR-201ENST00000553704 PRR20CP86479 221 aa5.67□□□□□ -1.5
LINC-ROR-201ENST00000553704 PRR20DP86480 221 aa5.67□□□□□ -1.5
LINC-ROR-201ENST00000553704 PRR20BP86481 221 aa5.67□□□□□ -1.5
LINC-ROR-201ENST00000553704 PRR20AP86496 221 aa5.67□□□□□ -1.5
LINC-ROR-201ENST00000553704 FOXL1Q12952 345 aa5.67□□□□□ -1.5
LINC-ROR-201ENST00000553704 OR5I1Q13606 314 aa5.67□□□□□ -1.5
LINC-ROR-201ENST00000553704 DEFB109BQ30KR1 87 aa5.67□□□□□ -1.5
LINC-ROR-201ENST00000553704 TEPPQ6URK8 271 aa5.67□□□□□ -1.5
LINC-ROR-201ENST00000553704 DEFB108BQ8NET1 73 aa5.67□□□□□ -1.5
LINC-ROR-201ENST00000553704 OR4P4Q8NGL7 312 aa5.67□□□□□ -1.5
LINC-ROR-201ENST00000553704 FAM216AQ8WUB2 273 aa5.67□□□□□ -1.5
LINC-ROR-201ENST00000553704 NPVFQ9HCQ7 196 aa5.67□□□□□ -1.5
LINC-ROR-201ENST00000553704 TUBG2Q9NRH3 451 aa5.67□□□□□ -1.5
LINC-ROR-201ENST00000553704 FAM215AQ9Y5M1 114 aa5.67□□□□□ -1.5
LINC-ROR-201ENST00000553704 ARFGEF3Q5TH69 2177 aa5.67□□□□□ -1.5
LINC-ROR-201ENST00000553704 CACNA1HO95180 2353 aa5.67□□□□□ -1.5
LINC-ROR-201ENST00000553704 SRRM4A7MD48 611 aaKnown RBP5.67□□□□□ -1.5
LINC-ROR-201ENST00000553704 KALRNO60229 2985 aa5.67□□□□□ -1.5
LINC-ROR-201ENST00000553704 FTH1P19P0C7X4 201 aa5.67□□□□□ -1.5
LINC-ROR-201ENST00000553704 CFHR2P36980 270 aa5.67□□□□□ -1.5
LINC-ROR-201ENST00000553704 RAB4BP61018 213 aa5.67□□□□□ -1.5
LINC-ROR-201ENST00000553704 ASPHD1Q5U4P2 390 aa5.67□□□□□ -1.5
LINC-ROR-201ENST00000553704 STUMQ69YW2 141 aa5.67□□□□□ -1.5
LINC-ROR-201ENST00000553704 OR10G8Q8NGN5 311 aa5.67□□□□□ -1.5
LINC-ROR-201ENST00000553704 C11orf52Q96A22 123 aa5.67□□□□□ -1.5
LINC-ROR-201ENST00000553704 ZNF503Q96F45 646 aa5.67□□□□□ -1.5
LINC-ROR-201ENST00000553704 GAFA1Q96PS6 74 aa5.67□□□□□ -1.5
LINC-ROR-201ENST00000553704 NDUFAF3Q9BU61 184 aa5.67□□□□□ -1.5
LINC-ROR-201ENST00000553704 POLR3KQ9Y2Y1 108 aaPredicted RBP5.67□□□□□ -1.5
LINC-ROR-201ENST00000553704 DYSFO75923 2080 aa5.67□□□□□ -1.5
LINC-ROR-201ENST00000553704 EP300Q09472 2414 aaPredicted RBP5.67□□□□□ -1.5
LINC-ROR-201ENST00000553704 OTOGLQ3ZCN5 2332 aa5.67□□□□□ -1.5
LINC-ROR-201ENST00000553704 NAV3Q8IVL0 2385 aa5.66□□□□□ -1.5
LINC-ROR-201ENST00000553704 KBTBD11-OT1A0A1B0GTJ5 212 aa5.66□□□□□ -1.5
LINC-ROR-201ENST00000553704 MBD3L4A6NDZ8 208 aaPredicted RBP5.66□□□□□ -1.5
LINC-ROR-201ENST00000553704 MBD3L3A6NE82 208 aaPredicted RBP5.66□□□□□ -1.5
LINC-ROR-201ENST00000553704 MBD3L5A6NJ08 208 aaPredicted RBP5.66□□□□□ -1.5
LINC-ROR-201ENST00000553704 KIR2DS2P43631 304 aa5.66□□□□□ -1.5
LINC-ROR-201ENST00000553704 HSPE1P61604 102 aaKnown RBP5.66□□□□□ -1.5
LINC-ROR-201ENST00000553704 RHOBP62745 196 aa5.66□□□□□ -1.5
LINC-ROR-201ENST00000553704 MRPS11P82912 194 aaKnown RBP5.66□□□□□ -1.5
LINC-ROR-201ENST00000553704 MLANAQ16655 118 aa5.66□□□□□ -1.5
LINC-ROR-201ENST00000553704 MBD3L2Q8NHZ7 208 aaPredicted RBP5.66□□□□□ -1.5
LINC-ROR-201ENST00000553704 PPP1R35Q8TAP8 253 aa5.66□□□□□ -1.5
LINC-ROR-201ENST00000553704 NEUROG1Q92886 237 aa5.66□□□□□ -1.5
LINC-ROR-201ENST00000553704 CCL13Q99616 98 aa5.66□□□□□ -1.5
LINC-ROR-201ENST00000553704 GCM1Q9NP62 436 aa5.66□□□□□ -1.5
LINC-ROR-201ENST00000553704 PARD6AQ9NPB6 346 aa5.66□□□□□ -1.5
LINC-ROR-201ENST00000553704 OR51B2Q9Y5P1 312 aa5.66□□□□□ -1.5
LINC-ROR-201ENST00000553704 IGLV3-9A0A075B6K5 115 aa5.66□□□□□ -1.5
LINC-ROR-201ENST00000553704 RPL29P47914 159 aaKnown RBP5.66□□□□□ -1.5
LINC-ROR-201ENST00000553704 RAB7AP51149 207 aa5.66□□□□□ -1.5
LINC-ROR-201ENST00000553704 YPEL3P61236 119 aaPredicted RBP5.66□□□□□ -1.5
LINC-ROR-201ENST00000553704 MZT1Q08AG7 82 aa5.66□□□□□ -1.5
LINC-ROR-201ENST00000553704 KRTCAP3Q53RY4 240 aa5.66□□□□□ -1.5
LINC-ROR-201ENST00000553704 CENPWQ5EE01 88 aa5.66□□□□□ -1.5
LINC-ROR-201ENST00000553704 PIP4P1Q86T03 277 aa5.66□□□□□ -1.5
LINC-ROR-201ENST00000553704 FAM222BQ8WU58 562 aa5.66□□□□□ -1.5
LINC-ROR-201ENST00000553704 RND1Q92730 232 aa5.66□□□□□ -1.5
LINC-ROR-201ENST00000553704 EAF1Q96JC9 268 aaPredicted RBP5.66□□□□□ -1.5
LINC-ROR-201ENST00000553704 NOL4LQ96MY1 436 aaPredicted RBP5.66□□□□□ -1.5
LINC-ROR-201ENST00000553704 LRFN3Q9BTN0 628 aa5.66□□□□□ -1.5
LINC-ROR-201ENST00000553704 CBLN4Q9NTU7 201 aa5.66□□□□□ -1.5
LINC-ROR-201ENST00000553704 FKBP11Q9NYL4 201 aa5.66□□□□□ -1.5
LINC-ROR-201ENST00000553704 IL36BQ9NZH7 164 aa5.66□□□□□ -1.5
LINC-ROR-201ENST00000553704 RNF114Q9Y508 228 aa5.66□□□□□ -1.5
LINC-ROR-201ENST00000553704 ATMQ13315 3056 aa5.66□□□□□ -1.5
LINC-ROR-201ENST00000553704 GGTLC3B5MD39 225 aa5.65□□□□□ -1.5
LINC-ROR-201ENST00000553704 FCN3O75636 299 aa5.65□□□□□ -1.5
LINC-ROR-201ENST00000553704 SCGB1D1O95968 90 aa5.65□□□□□ -1.5
LINC-ROR-201ENST00000553704 IGHV1-46P01743 117 aa5.65□□□□□ -1.5
LINC-ROR-201ENST00000553704 CT45A6P0DMU7 189 aa5.65□□□□□ -1.5
LINC-ROR-201ENST00000553704 CT45A5P0DMU8 189 aa5.65□□□□□ -1.5
LINC-ROR-201ENST00000553704 CT45A7P0DMV0 189 aa5.65□□□□□ -1.5
LINC-ROR-201ENST00000553704 CCKARP32238 428 aa5.65□□□□□ -1.5
LINC-ROR-201ENST00000553704 GLRXP35754 106 aa5.65□□□□□ -1.5
LINC-ROR-201ENST00000553704 ZNF90Q03938 601 aa5.65□□□□□ -1.5
LINC-ROR-201ENST00000553704 PSG5Q15238 335 aa5.65□□□□□ -1.5
LINC-ROR-201ENST00000553704 MORN5Q5VZ52 161 aa5.65□□□□□ -1.5
LINC-ROR-201ENST00000553704 Q6ZWC4 215 aa5.65□□□□□ -1.5
LINC-ROR-201ENST00000553704 DOLPP1Q86YN1 238 aa5.65□□□□□ -1.5
LINC-ROR-201ENST00000553704 OR10W1Q8NGF6 305 aa5.65□□□□□ -1.5
LINC-ROR-201ENST00000553704 OR9G1Q8NH87 305 aa5.65□□□□□ -1.5
LINC-ROR-201ENST00000553704 NABP2Q9BQ15 211 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 119.9 ms