RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 DNLZQ5SXM8 178 aa16.33■□□□□ 0.2
SUDS3-204ENST00000543473 PPP1R32Q7Z5V6 425 aa16.33■□□□□ 0.2
SUDS3-204ENST00000543473 GTF3AQ92664 365 aaKnown RBP16.33■□□□□ 0.2
SUDS3-204ENST00000543473 MC5RP33032 325 aa16.33■□□□□ 0.2
SUDS3-204ENST00000543473 C1orf194Q5T5A4 169 aa16.33■□□□□ 0.2
SUDS3-204ENST00000543473 RALGAPA1Q6GYQ0 2036 aa16.33■□□□□ 0.2
SUDS3-204ENST00000543473 DLEU1O43261 78 aa16.33■□□□□ 0.2
SUDS3-204ENST00000543473 LINC00470Q9BZP3 86 aa16.33■□□□□ 0.2
SUDS3-204ENST00000543473 TNFSF13O75888 250 aa16.32■□□□□ 0.2
SUDS3-204ENST00000543473 KLHDC3Q9BQ90 382 aa16.32■□□□□ 0.2
SUDS3-204ENST00000543473 CACNA1GO43497 2377 aa16.32■□□□□ 0.2
SUDS3-204ENST00000543473 LOC107984156A0A0G2JMH3 177 aa16.32■□□□□ 0.2
SUDS3-204ENST00000543473 J3KRW8 73 aa16.32■□□□□ 0.2
SUDS3-204ENST00000543473 RFPL3SP0C7P2 107 aa16.32■□□□□ 0.2
SUDS3-204ENST00000543473 ARL17AQ8IVW1 177 aa16.32■□□□□ 0.2
SUDS3-204ENST00000543473 DPF1Q92782 380 aa16.32■□□□□ 0.2
SUDS3-204ENST00000543473 A1L4Q6 167 aa16.32■□□□□ 0.2
SUDS3-204ENST00000543473 SNAI2O43623 268 aa16.32■□□□□ 0.2
SUDS3-204ENST00000543473 ATP5IP56385 69 aaPredicted RBP16.32■□□□□ 0.2
SUDS3-204ENST00000543473 QRFPP83859 136 aa16.32■□□□□ 0.2
SUDS3-204ENST00000543473 RNF144BQ7Z419 303 aa16.32■□□□□ 0.2
SUDS3-204ENST00000543473 ERASQ7Z444 233 aa16.32■□□□□ 0.2
SUDS3-204ENST00000543473 OCC1Q8TAD7 63 aa16.32■□□□□ 0.2
SUDS3-204ENST00000543473 SLC25A17O43808 307 aa16.31■□□□□ 0.2
SUDS3-204ENST00000543473 CSRP2Q16527 193 aa16.31■□□□□ 0.2
SUDS3-204ENST00000543473 ASCL5Q7RTU5 278 aa16.31■□□□□ 0.2
SUDS3-204ENST00000543473 PPIAL4EA0A075B759 164 aa16.31■□□□□ 0.2
SUDS3-204ENST00000543473 PPIAL4DF5H284 164 aa16.31■□□□□ 0.2
SUDS3-204ENST00000543473 PPIAL4FP0DN26 164 aa16.31■□□□□ 0.2
SUDS3-204ENST00000543473 RNASE7Q9H1E1 156 aaKnown RBP16.31■□□□□ 0.2
SUDS3-204ENST00000543473 IDI2-AS1Q9NZ38 188 aa16.31■□□□□ 0.2
SUDS3-204ENST00000543473 PPIAL4AQ9Y536 164 aa16.31■□□□□ 0.2
SUDS3-204ENST00000543473 IGKV1-12A0A0C4DH73 117 aa16.31■□□□□ 0.2
SUDS3-204ENST00000543473 IGKV1D-12P01611 117 aa16.31■□□□□ 0.2
SUDS3-204ENST00000543473 DLX1P56177 255 aa16.31■□□□□ 0.2
SUDS3-204ENST00000543473 ZNF664Q8N3J9 261 aa16.31■□□□□ 0.2
SUDS3-204ENST00000543473 BMI1P35226 326 aa16.31■□□□□ 0.2
SUDS3-204ENST00000543473 LGALS7P47929 136 aa16.31■□□□□ 0.2
SUDS3-204ENST00000543473 TMEM171Q8WVE6 324 aa16.31■□□□□ 0.2
SUDS3-204ENST00000543473 ZNF324O75467 553 aaPredicted RBP16.3■□□□□ 0.2
SUDS3-204ENST00000543473 FHL1Q13642 323 aa16.3■□□□□ 0.2
SUDS3-204ENST00000543473 ZNF502Q8TBZ5 544 aa16.3■□□□□ 0.2
SUDS3-204ENST00000543473 TMUB1Q9BVT8 246 aa16.3■□□□□ 0.2
SUDS3-204ENST00000543473 TMEM238LA0A1B0GVL6 79 aa16.3■□□□□ 0.2
SUDS3-204ENST00000543473 A6NJY4 79 aa16.3■□□□□ 0.2
SUDS3-204ENST00000543473 GPR6P46095 362 aaPredicted RBP16.3■□□□□ 0.2
SUDS3-204ENST00000543473 TEX38Q6PEX7 206 aa16.3■□□□□ 0.2
SUDS3-204ENST00000543473 MIR17HGQ75NE6 70 aa16.3■□□□□ 0.2
SUDS3-204ENST00000543473 FADS6Q8N9I5 356 aa16.3■□□□□ 0.2
SUDS3-204ENST00000543473 TTC28Q96AY4 2481 aa16.3■□□□□ 0.2
SUDS3-204ENST00000543473 HIST1H4GQ99525 98 aa16.3■□□□□ 0.2
SUDS3-204ENST00000543473 J3QW42 95 aa16.3■□□□□ 0.2
SUDS3-204ENST00000543473 GOSR1O95249 250 aa16.3■□□□□ 0.2
SUDS3-204ENST00000543473 ACSF3Q4G176 576 aaPredicted RBP16.3■□□□□ 0.2
SUDS3-204ENST00000543473 GOLT1AQ6ZVE7 132 aa16.3■□□□□ 0.2
SUDS3-204ENST00000543473 IZUMO1RA6ND01 250 aa16.29■□□□□ 0.2
SUDS3-204ENST00000543473 TMEM136Q6ZRR5 245 aa16.29■□□□□ 0.2
SUDS3-204ENST00000543473 WDR31Q8NA23 367 aa16.29■□□□□ 0.2
SUDS3-204ENST00000543473 MAP1LC3AQ9H492 121 aa16.29■□□□□ 0.2
SUDS3-204ENST00000543473 MGPP08493 103 aa16.29■□□□□ 0.2
SUDS3-204ENST00000543473 FAM131CQ96AQ9 280 aa16.29■□□□□ 0.2
SUDS3-204ENST00000543473 EAF1Q96JC9 268 aaPredicted RBP16.29■□□□□ 0.2
SUDS3-204ENST00000543473 RPP25LQ8N5L8 163 aaKnown RBP16.29■□□□□ 0.2
SUDS3-204ENST00000543473 PLPPR1Q8TBJ4 325 aa16.29■□□□□ 0.2
SUDS3-204ENST00000543473 WBP1Q96G27 269 aa16.29■□□□□ 0.2
SUDS3-204ENST00000543473 RBFOX2O43251 390 aaKnown RBP eCLIP16.28■□□□□ 0.2
SUDS3-204ENST00000543473 GZMBP10144 247 aa16.28■□□□□ 0.2
SUDS3-204ENST00000543473 PEX7O00628 323 aa16.28■□□□□ 0.2
SUDS3-204ENST00000543473 IGHV2-70P01814 119 aa16.28■□□□□ 0.2
SUDS3-204ENST00000543473 FBLN7Q53RD9 439 aa16.28■□□□□ 0.2
SUDS3-204ENST00000543473 LINC00305Q7Z4B0 112 aa16.28■□□□□ 0.2
SUDS3-204ENST00000543473 GFRA3O60609 400 aa16.28■□□□□ 0.2
SUDS3-204ENST00000543473 NRN1LQ496H8 165 aa16.28■□□□□ 0.2
SUDS3-204ENST00000543473 ZNF788Q6ZQV5 615 aa16.28■□□□□ 0.2
SUDS3-204ENST00000543473 TCF24Q7RTU0 167 aa16.28■□□□□ 0.2
SUDS3-204ENST00000543473 ZNRF1Q8ND25 227 aa16.28■□□□□ 0.2
SUDS3-204ENST00000543473 OR13A1Q8NGR1 328 aa16.28■□□□□ 0.2
SUDS3-204ENST00000543473 RAB1CQ92928 201 aa16.28■□□□□ 0.2
SUDS3-204ENST00000543473 TRAV9-2A0A087WT02 112 aa16.28■□□□□ 0.2
SUDS3-204ENST00000543473 TMEM256Q8N2U0 113 aa16.28■□□□□ 0.2
SUDS3-204ENST00000543473 IFNL4K9M1U5 179 aa16.27■□□□□ 0.2
SUDS3-204ENST00000543473 REG1AP05451 166 aa16.27■□□□□ 0.2
SUDS3-204ENST00000543473 UCNP55089 124 aa16.27■□□□□ 0.2
SUDS3-204ENST00000543473 NMSQ5H8A3 153 aa16.27■□□□□ 0.2
SUDS3-204ENST00000543473 M0QZ24 198 aa16.27■□□□□ 0.2
SUDS3-204ENST00000543473 NBEAP1P0C6P0 100 aa16.27■□□□□ 0.2
SUDS3-204ENST00000543473 GCSAMLQ5JQS6 135 aa16.27■□□□□ 0.2
SUDS3-204ENST00000543473 KHDC1LQ5JSQ8 128 aa16.27■□□□□ 0.2
SUDS3-204ENST00000543473 ZNF441Q8N8Z8 693 aa16.27■□□□□ 0.2
SUDS3-204ENST00000543473 IFI27L2Q9H2X8 130 aa16.27■□□□□ 0.2
SUDS3-204ENST00000543473 DOCK8Q8NF50 2099 aa16.27■□□□□ 0.19
SUDS3-204ENST00000543473 M0R3E3 92 aa16.27■□□□□ 0.19
SUDS3-204ENST00000543473 GATA2P23769 480 aaPredicted RBP16.27■□□□□ 0.19
SUDS3-204ENST00000543473 C2orf83Q53S99 150 aa16.27■□□□□ 0.19
SUDS3-204ENST00000543473 OR4C13Q8NGP0 309 aa16.27■□□□□ 0.19
SUDS3-204ENST00000543473 ZNF414Q96IQ9 312 aa16.27■□□□□ 0.19
SUDS3-204ENST00000543473 HGFACQ04756 655 aa16.27■□□□□ 0.19
SUDS3-204ENST00000543473 C1RLQ9NZP8 487 aa16.27■□□□□ 0.19
SUDS3-204ENST00000543473 RAMP3O60896 148 aa16.26■□□□□ 0.19
SUDS3-204ENST00000543473 SMIM13P0DJ93 91 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms