RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 GINS3Q9BRX5 216 aa7.56□□□□□ -1.2
GNE-206ENST00000543356 NDUFAF3Q9BU61 184 aa7.56□□□□□ -1.2
GNE-206ENST00000543356 SNHG12Q9BXW3 62 aa7.56□□□□□ -1.2
GNE-206ENST00000543356 TMEM14BQ9NUH8 114 aa7.56□□□□□ -1.2
GNE-206ENST00000543356 FAM96BQ9Y3D0 163 aa7.56□□□□□ -1.2
GNE-206ENST00000543356 TRAV3A0A0B4J244 114 aa7.55□□□□□ -1.2
GNE-206ENST00000543356 A1L4Q6 167 aa7.55□□□□□ -1.2
GNE-206ENST00000543356 CEBPZOSA8MTT3 80 aa7.55□□□□□ -1.2
GNE-206ENST00000543356 ODF3BA8MYP8 253 aa7.55□□□□□ -1.2
GNE-206ENST00000543356 CST7O76096 145 aa7.55□□□□□ -1.2
GNE-206ENST00000543356 SCAF4O95104 1147 aaKnown RBP7.55□□□□□ -1.2
GNE-206ENST00000543356 OPN1MWP04001 364 aa7.55□□□□□ -1.2
GNE-206ENST00000543356 OPN1MW2P0DN77 364 aa7.55□□□□□ -1.2
GNE-206ENST00000543356 OPN1MW3P0DN78 364 aa7.55□□□□□ -1.2
GNE-206ENST00000543356 RAB5AP20339 215 aa7.55□□□□□ -1.2
GNE-206ENST00000543356 S100A2P29034 98 aa7.55□□□□□ -1.2
GNE-206ENST00000543356 ATP5J2P56134 94 aa7.55□□□□□ -1.2
GNE-206ENST00000543356 DLX1P56177 255 aa7.55□□□□□ -1.2
GNE-206ENST00000543356 TMEM267Q0VDI3 215 aaPredicted RBP7.55□□□□□ -1.2
GNE-206ENST00000543356 HCP5Q6MZN7 132 aa7.55□□□□□ -1.2
GNE-206ENST00000543356 OR4C13Q8NGP0 309 aa7.55□□□□□ -1.2
GNE-206ENST00000543356 RNASE8Q8TDE3 154 aaKnown RBP7.55□□□□□ -1.2
GNE-206ENST00000543356 LHX4Q969G2 390 aa7.55□□□□□ -1.2
GNE-206ENST00000543356 FLYWCH2Q96CP2 140 aaKnown RBP7.55□□□□□ -1.2
GNE-206ENST00000543356 HARBI1Q96MB7 349 aa7.55□□□□□ -1.2
GNE-206ENST00000543356 ATP5SQ99766 215 aa7.55□□□□□ -1.2
GNE-206ENST00000543356 TREM1Q9NP99 234 aa7.55□□□□□ -1.2
GNE-206ENST00000543356 UQCC1Q9NVA1 299 aa7.55□□□□□ -1.2
GNE-206ENST00000543356 GAR1Q9NY12 217 aaKnown RBP7.55□□□□□ -1.2
GNE-206ENST00000543356 PRNDQ9UKY0 176 aa7.55□□□□□ -1.2
GNE-206ENST00000543356 POLR3KQ9Y2Y1 108 aaPredicted RBP7.55□□□□□ -1.2
GNE-206ENST00000543356 FLNCQ14315 2725 aa7.55□□□□□ -1.2
GNE-206ENST00000543356 USP9XQ93008 2570 aaPredicted RBP7.55□□□□□ -1.2
GNE-206ENST00000543356 ZNF705EA8MWA4 302 aaPredicted RBP7.55□□□□□ -1.2
GNE-206ENST00000543356 UPK2O00526 184 aa7.55□□□□□ -1.2
GNE-206ENST00000543356 FGF16O43320 207 aa7.55□□□□□ -1.2
GNE-206ENST00000543356 FOXH1O75593 365 aa7.55□□□□□ -1.2
GNE-206ENST00000543356 DFFBO76075 338 aa7.55□□□□□ -1.2
GNE-206ENST00000543356 ARG1P05089 322 aa7.55□□□□□ -1.2
GNE-206ENST00000543356 LINC00614P0C842 121 aa7.55□□□□□ -1.2
GNE-206ENST00000543356 HBG1P69891 147 aa7.55□□□□□ -1.2
GNE-206ENST00000543356 HBG2P69892 147 aa7.55□□□□□ -1.2
GNE-206ENST00000543356 OR4A5Q8NH83 315 aa7.55□□□□□ -1.2
GNE-206ENST00000543356 TMED6Q8WW62 240 aa7.55□□□□□ -1.2
GNE-206ENST00000543356 ZDHHC16Q969W1 377 aa7.55□□□□□ -1.2
GNE-206ENST00000543356 OR4C12Q96R67 309 aa7.55□□□□□ -1.2
GNE-206ENST00000543356 SIRPDQ9H106 197 aa7.55□□□□□ -1.2
GNE-206ENST00000543356 ZNF257Q9Y2Q1 563 aa7.55□□□□□ -1.2
GNE-206ENST00000543356 ZFYVE26Q68DK2 2539 aa7.55□□□□□ -1.2
GNE-206ENST00000543356 DOCK11Q5JSL3 2073 aa7.54□□□□□ -1.2
GNE-206ENST00000543356 IGHV1-3A0A0C4DH29 117 aa7.54□□□□□ -1.2
GNE-206ENST00000543356 SRRM4A7MD48 611 aaKnown RBP7.54□□□□□ -1.2
GNE-206ENST00000543356 IFNA17P01571 189 aa7.54□□□□□ -1.2
GNE-206ENST00000543356 SAA1P0DJI8 122 aaPredicted RBP7.54□□□□□ -1.2
GNE-206ENST00000543356 DSCR9P59020 149 aa7.54□□□□□ -1.2
GNE-206ENST00000543356 LCN2P80188 198 aa7.54□□□□□ -1.2
GNE-206ENST00000543356 SPANXN5Q5MJ07 72 aa7.54□□□□□ -1.2
GNE-206ENST00000543356 VMO1Q7Z5L0 202 aa7.54□□□□□ -1.2
GNE-206ENST00000543356 VSTM2AQ8TAG5 236 aa7.54□□□□□ -1.2
GNE-206ENST00000543356 RNF141Q8WVD5 230 aa7.54□□□□□ -1.2
GNE-206ENST00000543356 STRAPQ9Y3F4 350 aaKnown RBP7.54□□□□□ -1.2
GNE-206ENST00000543356 EPG5Q9HCE0 2579 aa7.54□□□□□ -1.2
GNE-206ENST00000543356 KBTBD11O94819 623 aa7.54□□□□□ -1.2
GNE-206ENST00000543356 SEC11BP0C7V7 166 aa7.54□□□□□ -1.2
GNE-206ENST00000543356 METTL15P1P0C7V9 234 aa7.54□□□□□ -1.2
GNE-206ENST00000543356 PLA2G2AP14555 144 aa7.54□□□□□ -1.2
GNE-206ENST00000543356 VDAC2P45880 294 aaPredicted RBP7.54□□□□□ -1.2
GNE-206ENST00000543356 HSPE1P61604 102 aaKnown RBP7.54□□□□□ -1.2
GNE-206ENST00000543356 TPTE2P1Q5T6R2 138 aa7.54□□□□□ -1.2
GNE-206ENST00000543356 HAPLN4Q86UW8 402 aa7.54□□□□□ -1.2
GNE-206ENST00000543356 TMEM217Q8N7C4 229 aa7.54□□□□□ -1.2
GNE-206ENST00000543356 RAB24Q969Q5 203 aa7.54□□□□□ -1.2
GNE-206ENST00000543356 RPEQ96AT9 228 aa7.54□□□□□ -1.2
GNE-206ENST00000543356 FKBP11Q9NYL4 201 aa7.54□□□□□ -1.2
GNE-206ENST00000543356 TCF19Q9Y242 345 aa7.54□□□□□ -1.2
GNE-206ENST00000543356 IGLV2-23P01705 113 aa7.53□□□□□ -1.2
GNE-206ENST00000543356 HOXB4P17483 251 aaPredicted RBP7.53□□□□□ -1.2
GNE-206ENST00000543356 HTR1DP28221 377 aa7.53□□□□□ -1.2
GNE-206ENST00000543356 CEACAM3P40198 252 aa7.53□□□□□ -1.2
GNE-206ENST00000543356 PRB3Q04118 309 aaPredicted RBP7.53□□□□□ -1.2
GNE-206ENST00000543356 GAGE1Q13065 139 aa7.53□□□□□ -1.2
GNE-206ENST00000543356 GFI1BQ5VTD9 330 aa7.53□□□□□ -1.2
GNE-206ENST00000543356 TMEM167AQ8TBQ9 72 aa7.53□□□□□ -1.2
GNE-206ENST00000543356 OR51B2Q9Y5P1 312 aa7.53□□□□□ -1.2
GNE-206ENST00000543356 INSIG2Q9Y5U4 225 aa7.53□□□□□ -1.2
GNE-206ENST00000543356 MALRD1Q5VYJ5 2156 aa7.53□□□□□ -1.2
GNE-206ENST00000543356 A0A1W2PPI3 338 aa7.53□□□□□ -1.2
GNE-206ENST00000543356 PMS2P5A8MQ11 134 aa7.53□□□□□ -1.2
GNE-206ENST00000543356 FAM157CP0CG43 387 aa7.53□□□□□ -1.2
GNE-206ENST00000543356 USF1P22415 310 aaPredicted RBP7.53□□□□□ -1.2
GNE-206ENST00000543356 LGALS7P47929 136 aa7.53□□□□□ -1.2
GNE-206ENST00000543356 SULT1A2P50226 295 aa7.53□□□□□ -1.2
GNE-206ENST00000543356 ARL16Q0P5N6 197 aa7.53□□□□□ -1.2
GNE-206ENST00000543356 KLRD1Q13241 179 aa7.53□□□□□ -1.2
GNE-206ENST00000543356 SPINK9Q5DT21 86 aa7.53□□□□□ -1.2
GNE-206ENST00000543356 TMUB1Q9BVT8 246 aa7.53□□□□□ -1.2
GNE-206ENST00000543356 HIPK2Q9H2X6 1198 aa7.53□□□□□ -1.2
GNE-206ENST00000543356 DPM3Q9P2X0 92 aa7.53□□□□□ -1.2
GNE-206ENST00000543356 HNF1AP20823 631 aa7.52□□□□□ -1.21
GNE-206ENST00000543356 DVL1P1P54792 670 aaPredicted RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms