RNA–Protein interactions for RNA: ENST00000543170.5

COPS7A-216, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-216ENST00000543170 OR11H1Q8NG94 326 aa14.24□□□□□ -0.13
COPS7A-216ENST00000543170 GLYATL2Q8WU03 294 aa14.24□□□□□ -0.13
COPS7A-216ENST00000543170 NDUFA4L2Q9NRX3 87 aa14.24□□□□□ -0.13
COPS7A-216ENST00000543170 NOTCH3Q9UM47 2321 aa14.24□□□□□ -0.13
COPS7A-216ENST00000543170 C13orf42A0A1B0GVH6 325 aa14.23□□□□□ -0.13
COPS7A-216ENST00000543170 IGKV1-5P01602 117 aa14.23□□□□□ -0.13
COPS7A-216ENST00000543170 OR8U8P0C7N1 319 aa14.23□□□□□ -0.13
COPS7A-216ENST00000543170 AREGP15514 252 aa14.23□□□□□ -0.13
COPS7A-216ENST00000543170 RBMS2Q15434 407 aaKnown RBP14.23□□□□□ -0.13
COPS7A-216ENST00000543170 SP6Q3SY56 376 aa14.23□□□□□ -0.13
COPS7A-216ENST00000543170 ZNF429Q86V71 674 aa14.23□□□□□ -0.13
COPS7A-216ENST00000543170 FAM219AQ8IW50 185 aa14.23□□□□□ -0.13
COPS7A-216ENST00000543170 S100ZQ8WXG8 99 aa14.23□□□□□ -0.13
COPS7A-216ENST00000543170 RBPMSQ93062 196 aaKnown RBP14.23□□□□□ -0.13
COPS7A-216ENST00000543170 LSM10Q969L4 123 aaKnown RBP14.23□□□□□ -0.13
COPS7A-216ENST00000543170 DUX3Q96PT4 197 aa14.23□□□□□ -0.13
COPS7A-216ENST00000543170 CCDC32Q9BV29 185 aa14.23□□□□□ -0.13
COPS7A-216ENST00000543170 NSG2Q9Y328 171 aa14.23□□□□□ -0.13
COPS7A-216ENST00000543170 OR51B2Q9Y5P1 312 aa14.23□□□□□ -0.13
COPS7A-216ENST00000543170 TEX50A0A1B0GTY4 177 aa14.22□□□□□ -0.13
COPS7A-216ENST00000543170 TRAPPC2P0DI81 140 aa14.22□□□□□ -0.13
COPS7A-216ENST00000543170 TRAPPC2BP0DI82 140 aa14.22□□□□□ -0.13
COPS7A-216ENST00000543170 NECAP1Q8NC96 275 aa14.22□□□□□ -0.13
COPS7A-216ENST00000543170 OR1N2Q8NGR9 330 aa14.22□□□□□ -0.13
COPS7A-216ENST00000543170 OR4A16Q8NH70 328 aa14.22□□□□□ -0.13
COPS7A-216ENST00000543170 IL22RA2Q969J5 263 aa14.22□□□□□ -0.13
COPS7A-216ENST00000543170 TMEM56Q96MV1 263 aa14.22□□□□□ -0.13
COPS7A-216ENST00000543170 OR5B12Q96R08 314 aa14.22□□□□□ -0.13
COPS7A-216ENST00000543170 MCRIP2Q9BUT9 160 aaKnown RBP14.22□□□□□ -0.13
COPS7A-216ENST00000543170 KCNIP3Q9Y2W7 256 aa14.22□□□□□ -0.13
COPS7A-216ENST00000543170 TMEM56-RWDD3S4R434 201 aa14.22□□□□□ -0.13
COPS7A-216ENST00000543170 CENPXA8MT69 81 aa14.21□□□□□ -0.13
COPS7A-216ENST00000543170 LINC01619G3V211 115 aa14.21□□□□□ -0.13
COPS7A-216ENST00000543170 IGHV3-11P01762 117 aa14.21□□□□□ -0.13
COPS7A-216ENST00000543170 HIST1H1BP16401 226 aaKnown RBP14.21□□□□□ -0.13
COPS7A-216ENST00000543170 RHOGP84095 191 aa14.21□□□□□ -0.13
COPS7A-216ENST00000543170 FAM209BQ5JX69 171 aa14.21□□□□□ -0.13
COPS7A-216ENST00000543170 ZNF343Q6P1L6 599 aa14.21□□□□□ -0.13
COPS7A-216ENST00000543170 RRNAD1Q96FB5 475 aaKnown RBP14.21□□□□□ -0.13
COPS7A-216ENST00000543170 GPR61Q9BZJ8 451 aa14.21□□□□□ -0.13
COPS7A-216ENST00000543170 ALX4Q9H161 411 aaPredicted RBP14.21□□□□□ -0.13
COPS7A-216ENST00000543170 NOTCH1P46531 2555 aa14.21□□□□□ -0.14
COPS7A-216ENST00000543170 PIGBOS1A0A0B4J2F0 54 aa14.2□□□□□ -0.14
COPS7A-216ENST00000543170 DBX1A6NMT0 343 aa14.2□□□□□ -0.14
COPS7A-216ENST00000543170 RBMXL2O75526 392 aaKnown RBP14.2□□□□□ -0.14
COPS7A-216ENST00000543170 HSPB1P04792 205 aaKnown RBP14.2□□□□□ -0.14
COPS7A-216ENST00000543170 ANXA3P12429 323 aa14.2□□□□□ -0.14
COPS7A-216ENST00000543170 SUPT4H1P63272 117 aaKnown RBP14.2□□□□□ -0.14
COPS7A-216ENST00000543170 SRPXP78539 464 aa14.2□□□□□ -0.14
COPS7A-216ENST00000543170 TMEM187Q14656 261 aa14.2□□□□□ -0.14
COPS7A-216ENST00000543170 TMEM128Q5BJH2 165 aa14.2□□□□□ -0.14
COPS7A-216ENST00000543170 KPRPQ5T749 579 aaPredicted RBP14.2□□□□□ -0.14
COPS7A-216ENST00000543170 LHFPL5Q8TAF8 219 aa14.2□□□□□ -0.14
COPS7A-216ENST00000543170 DPF1Q92782 380 aa14.2□□□□□ -0.14
COPS7A-216ENST00000543170 FANCD2OSQ96PS1 177 aa14.2□□□□□ -0.14
COPS7A-216ENST00000543170 IGLV11-55A0A075B6I3 123 aa14.19□□□□□ -0.14
COPS7A-216ENST00000543170 IGHV4OR15-8A0A075B7B6 117 aa14.19□□□□□ -0.14
COPS7A-216ENST00000543170 A0A087WW49 117 aa14.19□□□□□ -0.14
COPS7A-216ENST00000543170 G3V4G9 280 aa14.19□□□□□ -0.14
COPS7A-216ENST00000543170 NDUFB6O95139 128 aa14.19□□□□□ -0.14
COPS7A-216ENST00000543170 PRH1P02810 166 aa14.19□□□□□ -0.14
COPS7A-216ENST00000543170 AKR1C4P17516 323 aa14.19□□□□□ -0.14
COPS7A-216ENST00000543170 BTCP35070 178 aa14.19□□□□□ -0.14
COPS7A-216ENST00000543170 UBE2MP61081 183 aaKnown RBP14.19□□□□□ -0.14
COPS7A-216ENST00000543170 PRCDQ00LT1 54 aa14.19□□□□□ -0.14
COPS7A-216ENST00000543170 WT1-ASQ06250 92 aa14.19□□□□□ -0.14
COPS7A-216ENST00000543170 AARDQ4LEZ3 155 aa14.19□□□□□ -0.14
COPS7A-216ENST00000543170 SELENOHQ8IZQ5 122 aaKnown RBP14.19□□□□□ -0.14
COPS7A-216ENST00000543170 OR10W1Q8NGF6 305 aa14.19□□□□□ -0.14
COPS7A-216ENST00000543170 RNASE11Q8TAA1 199 aaKnown RBP14.19□□□□□ -0.14
COPS7A-216ENST00000543170 WDR12Q9GZL7 423 aaKnown RBP14.19□□□□□ -0.14
COPS7A-216ENST00000543170 RANGRFQ9HD47 186 aaPredicted RBP14.19□□□□□ -0.14
COPS7A-216ENST00000543170 A0A0B4J293 547 aa14.18□□□□□ -0.14
COPS7A-216ENST00000543170 CYB5BO43169 146 aa14.18□□□□□ -0.14
COPS7A-216ENST00000543170 OR2J3O76001 311 aa14.18□□□□□ -0.14
COPS7A-216ENST00000543170 REG1AP05451 166 aa14.18□□□□□ -0.14
COPS7A-216ENST00000543170 DEFA4P12838 97 aa14.18□□□□□ -0.14
COPS7A-216ENST00000543170 IGLL1P15814 213 aa14.18□□□□□ -0.14
COPS7A-216ENST00000543170 HSPE1P61604 102 aaKnown RBP14.18□□□□□ -0.14
COPS7A-216ENST00000543170 DEFA5Q01523 94 aa14.18□□□□□ -0.14
COPS7A-216ENST00000543170 ATP5G2Q06055 141 aa14.18□□□□□ -0.14
COPS7A-216ENST00000543170 EXOSC2Q13868 293 aaKnown RBP14.18□□□□□ -0.14
COPS7A-216ENST00000543170 C15orf32Q32M92 178 aa14.18□□□□□ -0.14
COPS7A-216ENST00000543170 BEAN1Q3B7T3 259 aa14.18□□□□□ -0.14
COPS7A-216ENST00000543170 TMEM268Q5VZI3 342 aa14.18□□□□□ -0.14
COPS7A-216ENST00000543170 C19orf35Q6ZS72 473 aa14.18□□□□□ -0.14
COPS7A-216ENST00000543170 TMED4Q7Z7H5 227 aa14.18□□□□□ -0.14
COPS7A-216ENST00000543170 CENPSQ8N2Z9 138 aa14.18□□□□□ -0.14
COPS7A-216ENST00000543170 DNAH3Q8TD57 4116 aa14.17□□□□□ -0.14
COPS7A-216ENST00000543170 A0A0G2JRQ6 117 aa14.17□□□□□ -0.14
COPS7A-216ENST00000543170 INS-IGF2F8WCM5 200 aa14.17□□□□□ -0.14
COPS7A-216ENST00000543170 WIPF1O43516 503 aa14.17□□□□□ -0.14
COPS7A-216ENST00000543170 OR13C7P0DN81 318 aa14.17□□□□□ -0.14
COPS7A-216ENST00000543170 ZP3P21754 424 aa14.17□□□□□ -0.14
COPS7A-216ENST00000543170 CCR6P51684 374 aa14.17□□□□□ -0.14
COPS7A-216ENST00000543170 RAB25P57735 213 aa14.17□□□□□ -0.14
COPS7A-216ENST00000543170 IZUMO4Q1ZYL8 232 aa14.17□□□□□ -0.14
COPS7A-216ENST00000543170 OXLD1Q5BKU9 147 aa14.17□□□□□ -0.14
COPS7A-216ENST00000543170 OR1L6Q8NGR2 347 aa14.17□□□□□ -0.14
COPS7A-216ENST00000543170 HINT2Q9BX68 163 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms