RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-210ENST00000542817 SLC25A32Q9H2D1 315 aa8.41□□□□□ -1.06
NPIPB3-210ENST00000542817 GPN1Q9HCN4 374 aaPredicted RBP8.41□□□□□ -1.06
NPIPB3-210ENST00000542817 RAB18Q9NP72 206 aa8.41□□□□□ -1.06
NPIPB3-210ENST00000542817 KCNIP3Q9Y2W7 256 aa8.41□□□□□ -1.06
NPIPB3-210ENST00000542817 NSG2Q9Y328 171 aa8.41□□□□□ -1.06
NPIPB3-210ENST00000542817 A0A0B4J2A0 478 aa8.4□□□□□ -1.06
NPIPB3-210ENST00000542817 TEX22C9J3V5 150 aa8.4□□□□□ -1.06
NPIPB3-210ENST00000542817 SSNA1O43805 119 aa8.4□□□□□ -1.06
NPIPB3-210ENST00000542817 S100A11P31949 105 aa8.4□□□□□ -1.06
NPIPB3-210ENST00000542817 CRIP2P52943 208 aaPredicted RBP8.4□□□□□ -1.06
NPIPB3-210ENST00000542817 CFHR3Q02985 330 aa8.4□□□□□ -1.06
NPIPB3-210ENST00000542817 VMA21Q3ZAQ7 101 aa8.4□□□□□ -1.06
NPIPB3-210ENST00000542817 C4orf46Q504U0 113 aa8.4□□□□□ -1.06
NPIPB3-210ENST00000542817 CLRN3Q8NCR9 226 aa8.4□□□□□ -1.06
NPIPB3-210ENST00000542817 RASL11BQ9BPW5 248 aa8.4□□□□□ -1.06
NPIPB3-210ENST00000542817 TMEM14BQ9NUH8 114 aa8.4□□□□□ -1.06
NPIPB3-210ENST00000542817 SHPKQ9UHJ6 478 aa8.4□□□□□ -1.06
NPIPB3-210ENST00000542817 TET2Q6N021 2002 aaPredicted RBP8.4□□□□□ -1.07
NPIPB3-210ENST00000542817 PKD1L1Q8TDX9 2849 aa8.39□□□□□ -1.07
NPIPB3-210ENST00000542817 TMEM89A2RUT3 159 aa8.39□□□□□ -1.07
NPIPB3-210ENST00000542817 ATP6V0E1O15342 81 aa8.39□□□□□ -1.07
NPIPB3-210ENST00000542817 PITX3O75364 302 aa8.39□□□□□ -1.07
NPIPB3-210ENST00000542817 ADAP1O75689 374 aa8.39□□□□□ -1.07
NPIPB3-210ENST00000542817 IGF1P05019 195 aa8.39□□□□□ -1.07
NPIPB3-210ENST00000542817 MDKP21741 143 aaPredicted RBP8.39□□□□□ -1.07
NPIPB3-210ENST00000542817 COMPP49747 757 aaPredicted RBP8.39□□□□□ -1.07
NPIPB3-210ENST00000542817 PROK1P58294 105 aa8.39□□□□□ -1.07
NPIPB3-210ENST00000542817 OR2B8PP59922 312 aa8.39□□□□□ -1.07
NPIPB3-210ENST00000542817 KRTAP10-3P60369 221 aa8.39□□□□□ -1.07
NPIPB3-210ENST00000542817 UQCC3Q6UW78 93 aa8.39□□□□□ -1.07
NPIPB3-210ENST00000542817 C10orf99Q6UWK7 81 aa8.39□□□□□ -1.07
NPIPB3-210ENST00000542817 LGI3Q8N145 548 aa8.39□□□□□ -1.07
NPIPB3-210ENST00000542817 DMBX1Q8NFW5 382 aa8.39□□□□□ -1.07
NPIPB3-210ENST00000542817 OR4A5Q8NH83 315 aa8.39□□□□□ -1.07
NPIPB3-210ENST00000542817 LSM10Q969L4 123 aaKnown RBP8.39□□□□□ -1.07
NPIPB3-210ENST00000542817 NOL4LQ96MY1 436 aaPredicted RBP8.39□□□□□ -1.07
NPIPB3-210ENST00000542817 FAM103A1Q9BTL3 118 aaKnown RBP8.39□□□□□ -1.07
NPIPB3-210ENST00000542817 PRSS22Q9GZN4 317 aa8.39□□□□□ -1.07
NPIPB3-210ENST00000542817 KIAA1456Q9P272 454 aa8.39□□□□□ -1.07
NPIPB3-210ENST00000542817 LINC00527Q9UJ94 153 aa8.39□□□□□ -1.07
NPIPB3-210ENST00000542817 ZNF580Q9UK33 172 aa8.39□□□□□ -1.07
NPIPB3-210ENST00000542817 MMP24Q9Y5R2 645 aa8.39□□□□□ -1.07
NPIPB3-210ENST00000542817 TEX50A0A1B0GTY4 177 aa8.38□□□□□ -1.07
NPIPB3-210ENST00000542817 C15orf61A6NNL5 157 aa8.38□□□□□ -1.07
NPIPB3-210ENST00000542817 G3V318 75 aa8.38□□□□□ -1.07
NPIPB3-210ENST00000542817 DNASE2O00115 360 aaPredicted RBP8.38□□□□□ -1.07
NPIPB3-210ENST00000542817 SOX15O60248 233 aa8.38□□□□□ -1.07
NPIPB3-210ENST00000542817 HLA-GP17693 338 aa8.38□□□□□ -1.07
NPIPB3-210ENST00000542817 CXCL2P19875 107 aa8.38□□□□□ -1.07
NPIPB3-210ENST00000542817 VDAC1P21796 283 aa8.38□□□□□ -1.07
NPIPB3-210ENST00000542817 PPIFP30405 207 aaKnown RBP8.38□□□□□ -1.07
NPIPB3-210ENST00000542817 RPL8P62917 257 aaKnown RBP8.38□□□□□ -1.07
NPIPB3-210ENST00000542817 FXYD3Q14802 87 aa8.38□□□□□ -1.07
NPIPB3-210ENST00000542817 GGNBP1Q5YKI7 109 aa8.38□□□□□ -1.07
NPIPB3-210ENST00000542817 ZNF695Q8IW36 515 aa8.38□□□□□ -1.07
NPIPB3-210ENST00000542817 MMD2Q8IY49 270 aa8.38□□□□□ -1.07
NPIPB3-210ENST00000542817 VSTM2AQ8TAG5 236 aa8.38□□□□□ -1.07
NPIPB3-210ENST00000542817 MARC2Q969Z3 335 aa8.38□□□□□ -1.07
NPIPB3-210ENST00000542817 QTRT1Q9BXR0 403 aaKnown RBP8.38□□□□□ -1.07
NPIPB3-210ENST00000542817 NDUFA4L2Q9NRX3 87 aa8.38□□□□□ -1.07
NPIPB3-210ENST00000542817 MGAT4CQ9UBM8 478 aa8.38□□□□□ -1.07
NPIPB3-210ENST00000542817 FOXA2Q9Y261 457 aaPredicted RBP8.38□□□□□ -1.07
NPIPB3-210ENST00000542817 DUXBA0A1W2PPF3 345 aa8.37□□□□□ -1.07
NPIPB3-210ENST00000542817 TEX46H3BTG2 121 aa8.37□□□□□ -1.07
NPIPB3-210ENST00000542817 CREBL2O60519 120 aaPredicted RBP8.37□□□□□ -1.07
NPIPB3-210ENST00000542817 OPN1MWP04001 364 aa8.37□□□□□ -1.07
NPIPB3-210ENST00000542817 HOXB5P09067 269 aa8.37□□□□□ -1.07
NPIPB3-210ENST00000542817 OPN1MW2P0DN77 364 aa8.37□□□□□ -1.07
NPIPB3-210ENST00000542817 OPN1MW3P0DN78 364 aa8.37□□□□□ -1.07
NPIPB3-210ENST00000542817 ERVK-16P61578 105 aa8.37□□□□□ -1.07
NPIPB3-210ENST00000542817 SRPXP78539 464 aa8.37□□□□□ -1.07
NPIPB3-210ENST00000542817 PLGLAQ15195 96 aa8.37□□□□□ -1.07
NPIPB3-210ENST00000542817 PDLIM3Q53GG5 364 aaPredicted RBP8.37□□□□□ -1.07
NPIPB3-210ENST00000542817 TCTEX1D4Q5JR98 221 aa8.37□□□□□ -1.07
NPIPB3-210ENST00000542817 C9orf152Q5JTZ5 239 aa8.37□□□□□ -1.07
NPIPB3-210ENST00000542817 C11orf87Q6NUJ2 197 aa8.37□□□□□ -1.07
NPIPB3-210ENST00000542817 TMUB2Q71RG4 321 aa8.37□□□□□ -1.07
NPIPB3-210ENST00000542817 H2BFWTQ7Z2G1 175 aa8.37□□□□□ -1.07
NPIPB3-210ENST00000542817 SLC35E3Q7Z769 313 aa8.37□□□□□ -1.07
NPIPB3-210ENST00000542817 ZNF429Q86V71 674 aa8.37□□□□□ -1.07
NPIPB3-210ENST00000542817 FAM219AQ8IW50 185 aa8.37□□□□□ -1.07
NPIPB3-210ENST00000542817 FOXRED2Q8IWF2 684 aa8.37□□□□□ -1.07
NPIPB3-210ENST00000542817 SGMS2Q8NHU3 365 aa8.37□□□□□ -1.07
NPIPB3-210ENST00000542817 SRSF12Q8WXF0 261 aaKnown RBP8.37□□□□□ -1.07
NPIPB3-210ENST00000542817 ARPC1AQ92747 370 aa8.37□□□□□ -1.07
NPIPB3-210ENST00000542817 WDR89Q96FK6 387 aaPredicted RBP8.37□□□□□ -1.07
NPIPB3-210ENST00000542817 OR10C1Q96KK4 312 aa8.37□□□□□ -1.07
NPIPB3-210ENST00000542817 MDFIQ99750 246 aa8.37□□□□□ -1.07
NPIPB3-210ENST00000542817 C19orf24Q9BVV8 132 aa8.37□□□□□ -1.07
NPIPB3-210ENST00000542817 COA4Q9NYJ1 87 aa8.37□□□□□ -1.07
NPIPB3-210ENST00000542817 CACNG5Q9UF02 275 aa8.37□□□□□ -1.07
NPIPB3-210ENST00000542817 IGLC7A0M8Q6 106 aa8.36□□□□□ -1.07
NPIPB3-210ENST00000542817 CLPSL1A2RUU4 121 aa8.36□□□□□ -1.07
NPIPB3-210ENST00000542817 MSGN1A6NI15 193 aa8.36□□□□□ -1.07
NPIPB3-210ENST00000542817 ZNF98A6NK75 572 aa8.36□□□□□ -1.07
NPIPB3-210ENST00000542817 NUDT19A8MXV4 375 aa8.36□□□□□ -1.07
NPIPB3-210ENST00000542817 ST8SIA3O43173 380 aa8.36□□□□□ -1.07
NPIPB3-210ENST00000542817 RBMXL2O75526 392 aaKnown RBP8.36□□□□□ -1.07
NPIPB3-210ENST00000542817 MAS1LP35410 378 aa8.36□□□□□ -1.07
NPIPB3-210ENST00000542817 AKR1C2P52895 323 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms