RNA–Protein interactions for RNA: ENST00000541102.1

LTBR-209, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5 BASIC

Gene LTBR, Length 1,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-209ENST00000541102 CDS2O95674 445 aa11.01□□□□□ -0.65
LTBR-209ENST00000541102 TCRBP04435 133 aa11.01□□□□□ -0.65
LTBR-209ENST00000541102 OR8U8P0C7N1 319 aa11.01□□□□□ -0.65
LTBR-209ENST00000541102 TPPP2P59282 170 aa11.01□□□□□ -0.65
LTBR-209ENST00000541102 OR2B8PP59922 312 aa11.01□□□□□ -0.65
LTBR-209ENST00000541102 RUNX1Q01196 453 aa11.01□□□□□ -0.65
LTBR-209ENST00000541102 DHODHQ02127 395 aa11.01□□□□□ -0.65
LTBR-209ENST00000541102 FHL3Q13643 280 aa11.01□□□□□ -0.65
LTBR-209ENST00000541102 TRIM16LQ309B1 348 aa11.01□□□□□ -0.65
LTBR-209ENST00000541102 ANKRD55Q3KP44 614 aa11.01□□□□□ -0.65
LTBR-209ENST00000541102 C9orf66Q5T8R8 295 aa11.01□□□□□ -0.65
LTBR-209ENST00000541102 C19orf35Q6ZS72 473 aa11.01□□□□□ -0.65
LTBR-209ENST00000541102 SGPP2Q8IWX5 399 aa11.01□□□□□ -0.65
LTBR-209ENST00000541102 CENPSQ8N2Z9 138 aa11.01□□□□□ -0.65
LTBR-209ENST00000541102 SRSF12Q8WXF0 261 aaKnown RBP11.01□□□□□ -0.65
LTBR-209ENST00000541102 GALNT14Q96FL9 552 aa11.01□□□□□ -0.65
LTBR-209ENST00000541102 TEX22C9J3V5 150 aa11□□□□□ -0.65
LTBR-209ENST00000541102 TRGV3P03979 118 aa11□□□□□ -0.65
LTBR-209ENST00000541102 HLA-GP17693 338 aa11□□□□□ -0.65
LTBR-209ENST00000541102 ERVK-16P61578 105 aa11□□□□□ -0.65
LTBR-209ENST00000541102 RPL8P62917 257 aaKnown RBP11□□□□□ -0.65
LTBR-209ENST00000541102 TMEM128Q5BJH2 165 aa11□□□□□ -0.65
LTBR-209ENST00000541102 Q6ZRM9 215 aa11□□□□□ -0.65
LTBR-209ENST00000541102 MMD2Q8IY49 270 aa11□□□□□ -0.65
LTBR-209ENST00000541102 TMEM56Q96MV1 263 aa11□□□□□ -0.65
LTBR-209ENST00000541102 C20orf85Q9H1P6 137 aa11□□□□□ -0.65
LTBR-209ENST00000541102 ZMAT5Q9UDW3 170 aaKnown RBP11□□□□□ -0.65
LTBR-209ENST00000541102 TMEM56-RWDD3S4R434 201 aa11□□□□□ -0.65
LTBR-209ENST00000541102 TRAV6A0A075B6T7 132 aa10.99□□□□□ -0.65
LTBR-209ENST00000541102 A0A0B4J293 547 aa10.99□□□□□ -0.65
LTBR-209ENST00000541102 LGALS1P09382 135 aaKnown RBP10.99□□□□□ -0.65
LTBR-209ENST00000541102 SPNP16150 400 aa10.99□□□□□ -0.65
LTBR-209ENST00000541102 VAMP1P23763 118 aa10.99□□□□□ -0.65
LTBR-209ENST00000541102 SLURP1P55000 103 aa10.99□□□□□ -0.65
LTBR-209ENST00000541102 TMEM268Q5VZI3 342 aa10.99□□□□□ -0.65
LTBR-209ENST00000541102 H2BFWTQ7Z2G1 175 aa10.99□□□□□ -0.65
LTBR-209ENST00000541102 NRARPQ7Z6K4 114 aa10.99□□□□□ -0.65
LTBR-209ENST00000541102 OR52B4Q8NGK2 314 aa10.99□□□□□ -0.65
LTBR-209ENST00000541102 OR4A5Q8NH83 315 aa10.99□□□□□ -0.65
LTBR-209ENST00000541102 VSTM2AQ8TAG5 236 aa10.99□□□□□ -0.65
LTBR-209ENST00000541102 DCUN1D4Q92564 292 aa10.99□□□□□ -0.65
LTBR-209ENST00000541102 NUDT15Q9NV35 164 aa10.99□□□□□ -0.65
LTBR-209ENST00000541102 IGHV4OR15-8A0A075B7B6 117 aa10.98□□□□□ -0.65
LTBR-209ENST00000541102 A0A087WW49 117 aa10.98□□□□□ -0.65
LTBR-209ENST00000541102 TEX50A0A1B0GTY4 177 aa10.98□□□□□ -0.65
LTBR-209ENST00000541102 LINC01619G3V211 115 aa10.98□□□□□ -0.65
LTBR-209ENST00000541102 RBMXL2O75526 392 aaKnown RBP10.98□□□□□ -0.65
LTBR-209ENST00000541102 SFT2D2O95562 160 aa10.98□□□□□ -0.65
LTBR-209ENST00000541102 AREGP15514 252 aa10.98□□□□□ -0.65
LTBR-209ENST00000541102 RPL27AP46776 148 aaKnown RBP10.98□□□□□ -0.65
LTBR-209ENST00000541102 DEFA5Q01523 94 aa10.98□□□□□ -0.65
LTBR-209ENST00000541102 LYZL2Q7Z4W2 148 aa10.98□□□□□ -0.65
LTBR-209ENST00000541102 SLC35G3Q8N808 338 aa10.98□□□□□ -0.65
LTBR-209ENST00000541102 OR10W1Q8NGF6 305 aa10.98□□□□□ -0.65
LTBR-209ENST00000541102 RBPMSQ93062 196 aaKnown RBP10.98□□□□□ -0.65
LTBR-209ENST00000541102 GPR146Q96CH1 333 aa10.98□□□□□ -0.65
LTBR-209ENST00000541102 FYTTD1Q96QD9 318 aaKnown RBP10.98□□□□□ -0.65
LTBR-209ENST00000541102 TSC22D3Q99576 134 aa10.98□□□□□ -0.65
LTBR-209ENST00000541102 PHB2Q99623 299 aa10.98□□□□□ -0.65
LTBR-209ENST00000541102 AIFM2Q9BRQ8 373 aa10.98□□□□□ -0.65
LTBR-209ENST00000541102 QTRT1Q9BXR0 403 aaKnown RBP10.98□□□□□ -0.65
LTBR-209ENST00000541102 SLA2Q9H6Q3 261 aa10.98□□□□□ -0.65
LTBR-209ENST00000541102 TMEM14BQ9NUH8 114 aa10.98□□□□□ -0.65
LTBR-209ENST00000541102 C13orf42A0A1B0GVH6 325 aa10.97□□□□□ -0.65
LTBR-209ENST00000541102 FAM240BA0A1B0GVZ2 78 aa10.97□□□□□ -0.65
LTBR-209ENST00000541102 C9orf170A2RU37 121 aa10.97□□□□□ -0.65
LTBR-209ENST00000541102 OVOL1O14753 267 aa10.97□□□□□ -0.65
LTBR-209ENST00000541102 B3GALNT1O75752 331 aa10.97□□□□□ -0.65
LTBR-209ENST00000541102 PRH1P02810 166 aa10.97□□□□□ -0.65
LTBR-209ENST00000541102 REG1AP05451 166 aa10.97□□□□□ -0.65
LTBR-209ENST00000541102 OR4E1P0C645 316 aa10.97□□□□□ -0.65
LTBR-209ENST00000541102 MAS1LP35410 378 aa10.97□□□□□ -0.65
LTBR-209ENST00000541102 AKR1C2P52895 323 aa10.97□□□□□ -0.65
LTBR-209ENST00000541102 DHRS2Q13268 280 aa10.97□□□□□ -0.65
LTBR-209ENST00000541102 SPINK9Q5DT21 86 aa10.97□□□□□ -0.65
LTBR-209ENST00000541102 MZT2BQ6NZ67 158 aa10.97□□□□□ -0.65
LTBR-209ENST00000541102 CADM3Q8N126 398 aa10.97□□□□□ -0.65
LTBR-209ENST00000541102 DLX4Q92988 240 aaPredicted RBP10.97□□□□□ -0.65
LTBR-209ENST00000541102 PRR25Q96S07 402 aa10.97□□□□□ -0.65
LTBR-209ENST00000541102 COA4Q9NYJ1 87 aa10.97□□□□□ -0.65
LTBR-209ENST00000541102 KCNIP3Q9Y2W7 256 aa10.97□□□□□ -0.65
LTBR-209ENST00000541102 OR51B2Q9Y5P1 312 aa10.97□□□□□ -0.65
LTBR-209ENST00000541102 IGLC7A0M8Q6 106 aa10.96□□□□□ -0.65
LTBR-209ENST00000541102 ANKRD34BA5PLL1 514 aa10.96□□□□□ -0.65
LTBR-209ENST00000541102 C15orf61A6NNL5 157 aa10.96□□□□□ -0.65
LTBR-209ENST00000541102 CREBL2O60519 120 aaPredicted RBP10.96□□□□□ -0.65
LTBR-209ENST00000541102 SNAPC5O75971 98 aa10.96□□□□□ -0.65
LTBR-209ENST00000541102 ACTL6BO94805 426 aa10.96□□□□□ -0.65
LTBR-209ENST00000541102 HSPB1P04792 205 aaKnown RBP10.96□□□□□ -0.65
LTBR-209ENST00000541102 UBE2MP61081 183 aaKnown RBP10.96□□□□□ -0.65
LTBR-209ENST00000541102 C11orf87Q6NUJ2 197 aa10.96□□□□□ -0.65
LTBR-209ENST00000541102 TMEM68Q96MH6 324 aa10.96□□□□□ -0.65
LTBR-209ENST00000541102 SEC22CQ9BRL7 303 aa10.96□□□□□ -0.65
LTBR-209ENST00000541102 NDUFA4L2Q9NRX3 87 aa10.96□□□□□ -0.65
LTBR-209ENST00000541102 H3BUA1 57 aa10.95□□□□□ -0.66
LTBR-209ENST00000541102 ST8SIA3O43173 380 aa10.95□□□□□ -0.66
LTBR-209ENST00000541102 SAP30O75446 220 aa10.95□□□□□ -0.66
LTBR-209ENST00000541102 HLA-AP01891 365 aaKnown RBP10.95□□□□□ -0.66
LTBR-209ENST00000541102 H2AFB2P0C5Z0 115 aa10.95□□□□□ -0.66
LTBR-209ENST00000541102 WT1-ASQ06250 92 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms