RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 OR10P1Q8NGE3 313 aa4.4□□□□□ -1.7
PROM1-220ENST00000540805 TAF15Q92804 592 aaKnown RBP eCLIP4.4□□□□□ -1.7
PROM1-220ENST00000540805 NEIL1Q96FI4 390 aaPredicted RBP4.4□□□□□ -1.7
PROM1-220ENST00000540805 C20orf144Q9BQM9 153 aa4.4□□□□□ -1.7
PROM1-220ENST00000540805 OR1A1Q9P1Q5 309 aa4.4□□□□□ -1.7
PROM1-220ENST00000540805 PSG2P11465 335 aa4.4□□□□□ -1.7
PROM1-220ENST00000540805 TPPP2P59282 170 aa4.4□□□□□ -1.7
PROM1-220ENST00000540805 UBE2G2P60604 165 aa4.4□□□□□ -1.7
PROM1-220ENST00000540805 RPL15P61313 204 aaKnown RBP4.4□□□□□ -1.7
PROM1-220ENST00000540805 SLC38A11Q08AI6 406 aa4.4□□□□□ -1.7
PROM1-220ENST00000540805 FAM27E3Q08E93 113 aa4.4□□□□□ -1.7
PROM1-220ENST00000540805 SRSF7Q16629 238 aaKnown RBP eCLIP4.4□□□□□ -1.7
PROM1-220ENST00000540805 IZUMO4Q1ZYL8 232 aa4.4□□□□□ -1.7
PROM1-220ENST00000540805 COL5A1-AS1Q5SY13 56 aa4.4□□□□□ -1.7
PROM1-220ENST00000540805 TPTE2P1Q5T6R2 138 aa4.4□□□□□ -1.7
PROM1-220ENST00000540805 ACSM6Q6P461 480 aa4.4□□□□□ -1.7
PROM1-220ENST00000540805 SMIM15Q7Z3B0 74 aa4.4□□□□□ -1.7
PROM1-220ENST00000540805 HAPLN4Q86UW8 402 aa4.4□□□□□ -1.7
PROM1-220ENST00000540805 OR2T6Q8NHC8 308 aa4.4□□□□□ -1.7
PROM1-220ENST00000540805 WDYHV1Q96HA8 205 aa4.4□□□□□ -1.7
PROM1-220ENST00000540805 OR4C12Q96R67 309 aa4.4□□□□□ -1.7
PROM1-220ENST00000540805 HSPB9Q9BQS6 159 aa4.4□□□□□ -1.7
PROM1-220ENST00000540805 PATZ1Q9HBE1 687 aaKnown RBP4.4□□□□□ -1.7
PROM1-220ENST00000540805 TIMM9Q9Y5J7 89 aa4.4□□□□□ -1.7
PROM1-220ENST00000540805 TRAV38-1A0A0B4J264 116 aa4.4□□□□□ -1.71
PROM1-220ENST00000540805 FAM90A10PA6NDY2 464 aa4.4□□□□□ -1.71
PROM1-220ENST00000540805 FAM90A18PA6NE21 464 aa4.4□□□□□ -1.71
PROM1-220ENST00000540805 FAM90A16PA6NEW6 464 aa4.4□□□□□ -1.71
PROM1-220ENST00000540805 FAM90A20PA6NIJ5 464 aa4.4□□□□□ -1.71
PROM1-220ENST00000540805 FAM90A8PA6NJQ4 464 aa4.4□□□□□ -1.71
PROM1-220ENST00000540805 FAM90A7PA6NKC0 464 aa4.4□□□□□ -1.71
PROM1-220ENST00000540805 FAM90A22PA8MWA6 464 aa4.4□□□□□ -1.71
PROM1-220ENST00000540805 KIAA1324LA8MWY0 1029 aaPredicted RBP4.4□□□□□ -1.71
PROM1-220ENST00000540805 FAM90A12PA8MX19 464 aa4.4□□□□□ -1.71
PROM1-220ENST00000540805 FAM90A5PA8MXJ8 464 aa4.4□□□□□ -1.71
PROM1-220ENST00000540805 FAM90A23PA8MXZ1 464 aa4.4□□□□□ -1.71
PROM1-220ENST00000540805 NTN3O00634 580 aaPredicted RBP4.4□□□□□ -1.71
PROM1-220ENST00000540805 RFPL3SP0C7P2 107 aa4.4□□□□□ -1.71
PROM1-220ENST00000540805 FAM90A15PP0C7V4 464 aa4.4□□□□□ -1.71
PROM1-220ENST00000540805 FAM90A13PP0C7W8 464 aa4.4□□□□□ -1.71
PROM1-220ENST00000540805 FAM90A14PP0C7W9 464 aa4.4□□□□□ -1.71
PROM1-220ENST00000540805 FAM90A24PP0C7X0 464 aa4.4□□□□□ -1.71
PROM1-220ENST00000540805 NBL1P41271 181 aa4.4□□□□□ -1.71
PROM1-220ENST00000540805 LINC00310P59036 64 aa4.4□□□□□ -1.71
PROM1-220ENST00000540805 RPP25LQ8N5L8 163 aaKnown RBP4.4□□□□□ -1.71
PROM1-220ENST00000540805 STPG3Q8N7X2 389 aa4.4□□□□□ -1.71
PROM1-220ENST00000540805 CCL13Q99616 98 aa4.4□□□□□ -1.71
PROM1-220ENST00000540805 SAMD10Q9BYL1 202 aa4.4□□□□□ -1.71
PROM1-220ENST00000540805 TMEM106BQ9NUM4 274 aa4.4□□□□□ -1.71
PROM1-220ENST00000540805 MGAQ8IWI9 3026 aa4.4□□□□□ -1.71
PROM1-220ENST00000540805 YLPM1P49750 1951 aaKnown RBP4.4□□□□□ -1.71
PROM1-220ENST00000540805 ATRQ13535 2644 aa4.4□□□□□ -1.71
PROM1-220ENST00000540805 C17orf112F2Z3M2 114 aa4.4□□□□□ -1.71
PROM1-220ENST00000540805 F6UZH7 168 aa4.4□□□□□ -1.71
PROM1-220ENST00000540805 SYNGR3O43761 229 aa4.4□□□□□ -1.71
PROM1-220ENST00000540805 IGKV1D-33P01593 117 aa4.4□□□□□ -1.71
PROM1-220ENST00000540805 IGKV1-33P01594 117 aa4.4□□□□□ -1.71
PROM1-220ENST00000540805 S100A4P26447 101 aaKnown RBP4.4□□□□□ -1.71
PROM1-220ENST00000540805 OPRK1P41145 380 aa4.4□□□□□ -1.71
PROM1-220ENST00000540805 CSN1S1P47710 185 aa4.4□□□□□ -1.71
PROM1-220ENST00000540805 ARF6P62330 175 aa4.4□□□□□ -1.71
PROM1-220ENST00000540805 RPL31P62899 125 aaKnown RBP4.4□□□□□ -1.71
PROM1-220ENST00000540805 VMA21Q3ZAQ7 101 aa4.4□□□□□ -1.71
PROM1-220ENST00000540805 FAM27BQ5VT28 67 aa4.4□□□□□ -1.71
PROM1-220ENST00000540805 MRPL14Q6P1L8 145 aaKnown RBP4.4□□□□□ -1.71
PROM1-220ENST00000540805 TEX43Q6ZNM6 134 aa4.4□□□□□ -1.71
PROM1-220ENST00000540805 ZNF439Q8NDP4 499 aa4.4□□□□□ -1.71
PROM1-220ENST00000540805 LSM10Q969L4 123 aaKnown RBP4.4□□□□□ -1.71
PROM1-220ENST00000540805 AP1S3Q96PC3 154 aa4.4□□□□□ -1.71
PROM1-220ENST00000540805 VAMP8Q9BV40 100 aa4.4□□□□□ -1.71
PROM1-220ENST00000540805 REPIN1Q9BWE0 567 aaKnown RBP4.4□□□□□ -1.71
PROM1-220ENST00000540805 MTCH1Q9NZJ7 389 aa4.4□□□□□ -1.71
PROM1-220ENST00000540805 TP53TG3Q9ULZ0 132 aa4.4□□□□□ -1.71
PROM1-220ENST00000540805 INSIG2Q9Y5U4 225 aa4.4□□□□□ -1.71
PROM1-220ENST00000540805 PXMP4Q9Y6I8 212 aa4.4□□□□□ -1.71
PROM1-220ENST00000540805 DMXL2Q8TDJ6 3036 aa4.39□□□□□ -1.71
PROM1-220ENST00000540805 CSMD1Q96PZ7 3565 aa4.39□□□□□ -1.71
PROM1-220ENST00000540805 IGHV3-35A0A0C4DH35 117 aa4.39□□□□□ -1.71
PROM1-220ENST00000540805 hCG_38984A0A1B0GV85 526 aa4.39□□□□□ -1.71
PROM1-220ENST00000540805 NAPSAO96009 420 aa4.39□□□□□ -1.71
PROM1-220ENST00000540805 CT45A10P0DMU9 189 aa4.39□□□□□ -1.71
PROM1-220ENST00000540805 KRTDAPP60985 99 aa4.39□□□□□ -1.71
PROM1-220ENST00000540805 UBE2G1P62253 170 aa4.39□□□□□ -1.71
PROM1-220ENST00000540805 RHOBP62745 196 aa4.39□□□□□ -1.71
PROM1-220ENST00000540805 PAFAH1B2P68402 229 aa4.39□□□□□ -1.71
PROM1-220ENST00000540805 AESQ08117 197 aa4.39□□□□□ -1.71
PROM1-220ENST00000540805 UBE2V1Q13404 147 aa4.39□□□□□ -1.71
PROM1-220ENST00000540805 TNXAQ16473 311 aa4.39□□□□□ -1.71
PROM1-220ENST00000540805 ECSCRQ19T08 205 aa4.39□□□□□ -1.71
PROM1-220ENST00000540805 FFAR4Q5NUL3 377 aa4.39□□□□□ -1.71
PROM1-220ENST00000540805 LCN12Q6JVE5 192 aa4.39□□□□□ -1.71
PROM1-220ENST00000540805 PPP1R32Q7Z5V6 425 aa4.39□□□□□ -1.71
PROM1-220ENST00000540805 BCL2L2Q92843 193 aaPredicted RBP4.39□□□□□ -1.71
PROM1-220ENST00000540805 PERPQ96FX8 193 aa4.39□□□□□ -1.71
PROM1-220ENST00000540805 NAA38Q9BRA0 125 aaKnown RBP4.39□□□□□ -1.71
PROM1-220ENST00000540805 OR2D2Q9H210 308 aa4.39□□□□□ -1.71
PROM1-220ENST00000540805 IL19Q9UHD0 177 aa4.39□□□□□ -1.71
PROM1-220ENST00000540805 PRR14LQ5THK1 2151 aa4.39□□□□□ -1.71
PROM1-220ENST00000540805 AKAP13Q12802 2813 aa4.39□□□□□ -1.71
PROM1-220ENST00000540805 SPINK4O60575 86 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms