RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 TSPOP30536 169 aa14.54□□□□□ -0.08
RAB40C-205ENST00000539661 SSTR5P35346 364 aa14.54□□□□□ -0.08
RAB40C-205ENST00000539661 RBX1P62877 108 aa14.54□□□□□ -0.08
RAB40C-205ENST00000539661 SSPNQ14714 243 aa14.54□□□□□ -0.08
RAB40C-205ENST00000539661 PNKDQ8N490 385 aa14.54□□□□□ -0.08
RAB40C-205ENST00000539661 TSKUQ8WUA8 353 aa14.54□□□□□ -0.08
RAB40C-205ENST00000539661 CA2P00918 260 aa14.54□□□□□ -0.08
RAB40C-205ENST00000539661 CGAP01215 116 aa14.54□□□□□ -0.08
RAB40C-205ENST00000539661 PRR20EP86478 221 aa14.54□□□□□ -0.08
RAB40C-205ENST00000539661 PRR20CP86479 221 aa14.54□□□□□ -0.08
RAB40C-205ENST00000539661 PRR20DP86480 221 aa14.54□□□□□ -0.08
RAB40C-205ENST00000539661 PRR20BP86481 221 aa14.54□□□□□ -0.08
RAB40C-205ENST00000539661 PRR20AP86496 221 aa14.54□□□□□ -0.08
RAB40C-205ENST00000539661 SAPCD1Q5SSQ6 148 aa14.54□□□□□ -0.08
RAB40C-205ENST00000539661 STUMQ69YW2 141 aa14.54□□□□□ -0.08
RAB40C-205ENST00000539661 RASL11AQ6T310 242 aa14.54□□□□□ -0.08
RAB40C-205ENST00000539661 ACP7Q6ZNF0 438 aa14.54□□□□□ -0.08
RAB40C-205ENST00000539661 PQLC2Q6ZP29 291 aa14.54□□□□□ -0.08
RAB40C-205ENST00000539661 ABHD12Q8N2K0 398 aa14.54□□□□□ -0.08
RAB40C-205ENST00000539661 ZNF439Q8NDP4 499 aa14.54□□□□□ -0.08
RAB40C-205ENST00000539661 ZNF738Q8NE65 137 aa14.54□□□□□ -0.08
RAB40C-205ENST00000539661 OR13A1Q8NGR1 328 aa14.54□□□□□ -0.08
RAB40C-205ENST00000539661 C22orf15Q8WYQ4 148 aa14.54□□□□□ -0.08
RAB40C-205ENST00000539661 TCF19Q9Y242 345 aa14.54□□□□□ -0.08
RAB40C-205ENST00000539661 LOXL2Q9Y4K0 774 aa14.54□□□□□ -0.08
RAB40C-205ENST00000539661 PPIAL4AQ9Y536 164 aa14.54□□□□□ -0.08
RAB40C-205ENST00000539661 COX11Q9Y6N1 276 aa14.54□□□□□ -0.08
RAB40C-205ENST00000539661 R4GN57 208 aa14.54□□□□□ -0.08
RAB40C-205ENST00000539661 IGHV3-43A0A0B4J1X8 118 aa14.53□□□□□ -0.08
RAB40C-205ENST00000539661 IGHV3-43DP0DP04 118 aa14.53□□□□□ -0.08
RAB40C-205ENST00000539661 KIAA1644Q3SXP7 199 aa14.53□□□□□ -0.08
RAB40C-205ENST00000539661 IGHV2-26A0A0B4J1V2 119 aa14.53□□□□□ -0.08
RAB40C-205ENST00000539661 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.53□□□□□ -0.08
RAB40C-205ENST00000539661 KIR2DS2P43631 304 aa14.53□□□□□ -0.08
RAB40C-205ENST00000539661 SELENOVP59797 346 aa14.53□□□□□ -0.08
RAB40C-205ENST00000539661 Q6ZR03 302 aa14.53□□□□□ -0.08
RAB40C-205ENST00000539661 Q8TCH9 128 aa14.53□□□□□ -0.08
RAB40C-205ENST00000539661 CACNA1HO95180 2353 aa14.52□□□□□ -0.08
RAB40C-205ENST00000539661 C15orf65H3BRN8 121 aa14.52□□□□□ -0.08
RAB40C-205ENST00000539661 APCSP02743 223 aa14.52□□□□□ -0.08
RAB40C-205ENST00000539661 CRYBB3P26998 211 aa14.52□□□□□ -0.08
RAB40C-205ENST00000539661 DOLPP1Q86YN1 238 aa14.52□□□□□ -0.08
RAB40C-205ENST00000539661 RNASE7Q9H1E1 156 aaKnown RBP14.52□□□□□ -0.08
RAB40C-205ENST00000539661 IZUMO1RA6ND01 250 aa14.52□□□□□ -0.09
RAB40C-205ENST00000539661 WNT9BO14905 357 aa14.52□□□□□ -0.09
RAB40C-205ENST00000539661 PROP1O75360 226 aa14.52□□□□□ -0.09
RAB40C-205ENST00000539661 RTL8BQ17RB0 113 aa14.52□□□□□ -0.09
RAB40C-205ENST00000539661 ALKBH6Q3KRA9 238 aa14.52□□□□□ -0.09
RAB40C-205ENST00000539661 C11orf53Q8IXP5 236 aa14.52□□□□□ -0.09
RAB40C-205ENST00000539661 SLC25A40Q8TBP6 338 aa14.52□□□□□ -0.09
RAB40C-205ENST00000539661 WIPF2Q8TF74 440 aaPredicted RBP14.52□□□□□ -0.09
RAB40C-205ENST00000539661 PILRBQ9UKJ0 227 aa14.52□□□□□ -0.09
RAB40C-205ENST00000539661 DEFB108AA8MXU0 73 aa14.51□□□□□ -0.09
RAB40C-205ENST00000539661 NPY1RP25929 384 aa14.51□□□□□ -0.09
RAB40C-205ENST00000539661 RNASE8Q8TDE3 154 aaKnown RBP14.51□□□□□ -0.09
RAB40C-205ENST00000539661 COMMD5Q9GZQ3 224 aa14.51□□□□□ -0.09
RAB40C-205ENST00000539661 TMEM140Q9NV12 185 aa14.51□□□□□ -0.09
RAB40C-205ENST00000539661 IGHV3-64DA0A0J9YX35 117 aa14.51□□□□□ -0.09
RAB40C-205ENST00000539661 SPINK4O60575 86 aa14.51□□□□□ -0.09
RAB40C-205ENST00000539661 MAGEA5P43359 124 aa14.51□□□□□ -0.09
RAB40C-205ENST00000539661 CDKN1BP46527 198 aa14.51□□□□□ -0.09
RAB40C-205ENST00000539661 PSG5Q15238 335 aa14.51□□□□□ -0.09
RAB40C-205ENST00000539661 IBA57Q5T440 356 aaKnown RBP14.51□□□□□ -0.09
RAB40C-205ENST00000539661 PMS2CLQ68D20 193 aa14.51□□□□□ -0.09
RAB40C-205ENST00000539661 VASH2Q86V25 355 aa14.51□□□□□ -0.09
RAB40C-205ENST00000539661 SLC24A4Q8NFF2 622 aa14.51□□□□□ -0.09
RAB40C-205ENST00000539661 RFESDQ8TAC1 157 aa14.51□□□□□ -0.09
RAB40C-205ENST00000539661 TTTY12Q9BZ98 90 aa14.51□□□□□ -0.09
RAB40C-205ENST00000539661 WNT10AQ9GZT5 417 aa14.51□□□□□ -0.09
RAB40C-205ENST00000539661 TUBG2Q9NRH3 451 aa14.51□□□□□ -0.09
RAB40C-205ENST00000539661 TECRQ9NZ01 308 aaKnown RBP14.51□□□□□ -0.09
RAB40C-205ENST00000539661 JPT1Q9UK76 154 aa14.51□□□□□ -0.09
RAB40C-205ENST00000539661 NBEAQ8NFP9 2946 aa14.51□□□□□ -0.09
RAB40C-205ENST00000539661 DUSP3P51452 185 aaPredicted RBP14.5□□□□□ -0.09
RAB40C-205ENST00000539661 MIR17HGQ75NE6 70 aa14.5□□□□□ -0.09
RAB40C-205ENST00000539661 C12orf49Q9H741 205 aa14.5□□□□□ -0.09
RAB40C-205ENST00000539661 OBP2BQ9NPH6 170 aa14.5□□□□□ -0.09
RAB40C-205ENST00000539661 HCFC1P51610 2035 aa14.5□□□□□ -0.09
RAB40C-205ENST00000539661 C15orf61A6NNL5 157 aa14.5□□□□□ -0.09
RAB40C-205ENST00000539661 LINC00869P0C866 280 aa14.5□□□□□ -0.09
RAB40C-205ENST00000539661 PPOXP50336 477 aa14.5□□□□□ -0.09
RAB40C-205ENST00000539661 NEUROG1Q92886 237 aa14.5□□□□□ -0.09
RAB40C-205ENST00000539661 CXXC4Q9H2H0 198 aa14.5□□□□□ -0.09
RAB40C-205ENST00000539661 ZNF331Q9NQX6 463 aaPredicted RBP14.5□□□□□ -0.09
RAB40C-205ENST00000539661 MGAQ8IWI9 3026 aa14.49□□□□□ -0.09
RAB40C-205ENST00000539661 TRAV9-2A0A087WT02 112 aa14.49□□□□□ -0.09
RAB40C-205ENST00000539661 IGHV1-69-2A0A0G2JMI3 117 aa14.49□□□□□ -0.09
RAB40C-205ENST00000539661 M0R1X1 148 aa14.49□□□□□ -0.09
RAB40C-205ENST00000539661 IGLV2-8P01709 118 aa14.49□□□□□ -0.09
RAB40C-205ENST00000539661 FXYD3Q14802 87 aa14.49□□□□□ -0.09
RAB40C-205ENST00000539661 C18orf32Q8TCD1 76 aa14.49□□□□□ -0.09
RAB40C-205ENST00000539661 S1PR3Q99500 378 aa14.49□□□□□ -0.09
RAB40C-205ENST00000539661 C19orf24Q9BVV8 132 aa14.49□□□□□ -0.09
RAB40C-205ENST00000539661 CLEC7AQ9BXN2 247 aa14.49□□□□□ -0.09
RAB40C-205ENST00000539661 IGHV2OR16-5A0A0B4J2B6 119 aa14.49□□□□□ -0.09
RAB40C-205ENST00000539661 COTL1Q14019 142 aa14.49□□□□□ -0.09
RAB40C-205ENST00000539661 SMIM21Q3B7S5 101 aa14.49□□□□□ -0.09
RAB40C-205ENST00000539661 MRPL54Q6P161 138 aaKnown RBP14.49□□□□□ -0.09
RAB40C-205ENST00000539661 ZNF826PQ6ZT77 177 aa14.49□□□□□ -0.09
RAB40C-205ENST00000539661 FOXA2Q9Y261 457 aaPredicted RBP14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms