RNA–Protein interactions for RNA: ENST00000537642.1

USP28-204, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 732 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-204ENST00000537642 PI3P19957 117 aa11.25□□□□□ -0.61
USP28-204ENST00000537642 PTBP1P26599 531 aaKnown RBP eCLIP11.25□□□□□ -0.61
USP28-204ENST00000537642 TAS2R19P59542 299 aa11.25□□□□□ -0.61
USP28-204ENST00000537642 RND3P61587 244 aa11.25□□□□□ -0.61
USP28-204ENST00000537642 MRPS10P82664 201 aaKnown RBP11.25□□□□□ -0.61
USP28-204ENST00000537642 WT1-ASQ06250 92 aa11.25□□□□□ -0.61
USP28-204ENST00000537642 THOC7Q6I9Y2 204 aaKnown RBP11.25□□□□□ -0.61
USP28-204ENST00000537642 CLEC19AQ6UXS0 136 aa11.25□□□□□ -0.61
USP28-204ENST00000537642 EEF1AKMT3Q96AZ1 226 aa11.25□□□□□ -0.61
USP28-204ENST00000537642 ISOC1Q96CN7 298 aa11.25□□□□□ -0.61
USP28-204ENST00000537642 DIRAS2Q96HU8 199 aa11.25□□□□□ -0.61
USP28-204ENST00000537642 SEC22AQ96IW7 307 aa11.25□□□□□ -0.61
USP28-204ENST00000537642 ASCL2Q99929 193 aa11.25□□□□□ -0.61
USP28-204ENST00000537642 SLIRPQ9GZT3 109 aaKnown RBP11.25□□□□□ -0.61
USP28-204ENST00000537642 PEMTQ9UBM1 199 aa11.25□□□□□ -0.61
USP28-204ENST00000537642 OR51B2Q9Y5P1 312 aa11.25□□□□□ -0.61
USP28-204ENST00000537642 NOL3O60936 208 aaKnown RBP11.24□□□□□ -0.61
USP28-204ENST00000537642 GGCTO75223 188 aaKnown RBP11.24□□□□□ -0.61
USP28-204ENST00000537642 OR2C1O95371 312 aa11.24□□□□□ -0.61
USP28-204ENST00000537642 RAB3DO95716 219 aa11.24□□□□□ -0.61
USP28-204ENST00000537642 SERPINE2P07093 398 aa11.24□□□□□ -0.61
USP28-204ENST00000537642 OR13C7P0DN81 318 aa11.24□□□□□ -0.61
USP28-204ENST00000537642 PPP5CP53041 499 aa11.24□□□□□ -0.61
USP28-204ENST00000537642 PIGPP57054 158 aa11.24□□□□□ -0.61
USP28-204ENST00000537642 SSBP1Q04837 148 aaKnown RBP11.24□□□□□ -0.61
USP28-204ENST00000537642 STEAP1BQ6NZ63 245 aa11.24□□□□□ -0.61
USP28-204ENST00000537642 ADAMTSL5Q6ZMM2 481 aa11.24□□□□□ -0.61
USP28-204ENST00000537642 GDPD1Q8N9F7 314 aa11.24□□□□□ -0.61
USP28-204ENST00000537642 SMIM4Q8WVI0 70 aa11.24□□□□□ -0.61
USP28-204ENST00000537642 ZNF486Q96H40 463 aaPredicted RBP11.24□□□□□ -0.61
USP28-204ENST00000537642 HINT2Q9BX68 163 aa11.24□□□□□ -0.61
USP28-204ENST00000537642 TMEM14BQ9NUH8 114 aa11.24□□□□□ -0.61
USP28-204ENST00000537642 PRNDQ9UKY0 176 aa11.24□□□□□ -0.61
USP28-204ENST00000537642 C15orf61A6NNL5 157 aa11.23□□□□□ -0.61
USP28-204ENST00000537642 CTDSPLO15194 276 aa11.23□□□□□ -0.61
USP28-204ENST00000537642 NHLRC4P0CG21 123 aaPredicted RBP11.23□□□□□ -0.61
USP28-204ENST00000537642 ARL3P36405 182 aa11.23□□□□□ -0.61
USP28-204ENST00000537642 MECP2P51608 486 aaKnown RBP11.23□□□□□ -0.61
USP28-204ENST00000537642 IL18Q14116 193 aa11.23□□□□□ -0.61
USP28-204ENST00000537642 FAAP20Q6NZ36 180 aa11.23□□□□□ -0.61
USP28-204ENST00000537642 HSD17B13Q7Z5P4 300 aaPredicted RBP11.23□□□□□ -0.61
USP28-204ENST00000537642 Q8N1Y9 231 aa11.23□□□□□ -0.61
USP28-204ENST00000537642 TERB2Q8NHR7 220 aa11.23□□□□□ -0.61
USP28-204ENST00000537642 LSM10Q969L4 123 aaKnown RBP11.23□□□□□ -0.61
USP28-204ENST00000537642 MRGPRFQ96AM1 343 aa11.23□□□□□ -0.61
USP28-204ENST00000537642 CXorf58Q96LI9 332 aa11.23□□□□□ -0.61
USP28-204ENST00000537642 TSC22D3Q99576 134 aa11.23□□□□□ -0.61
USP28-204ENST00000537642 C6orf62Q9GZU0 229 aaPredicted RBP11.23□□□□□ -0.61
USP28-204ENST00000537642 CEPT1Q9Y6K0 416 aa11.23□□□□□ -0.61
USP28-204ENST00000537642 TRBV7-1A0A0A6YYK4 115 aa11.22□□□□□ -0.61
USP28-204ENST00000537642 IZUMO1RA6ND01 250 aa11.22□□□□□ -0.61
USP28-204ENST00000537642 H0Y980 276 aa11.22□□□□□ -0.61
USP28-204ENST00000537642 EDN2P20800 178 aa11.22□□□□□ -0.61
USP28-204ENST00000537642 MFAP2P55001 183 aa11.22□□□□□ -0.61
USP28-204ENST00000537642 SCGB2B2Q4G0G5 96 aa11.22□□□□□ -0.61
USP28-204ENST00000537642 SLC25A24Q6NUK1 477 aa11.22□□□□□ -0.61
USP28-204ENST00000537642 H2BFWTQ7Z2G1 175 aa11.22□□□□□ -0.61
USP28-204ENST00000537642 GPHB5Q86YW7 130 aa11.22□□□□□ -0.61
USP28-204ENST00000537642 OR13C8Q8NGS7 320 aa11.22□□□□□ -0.61
USP28-204ENST00000537642 OR5B3Q8NH48 314 aa11.22□□□□□ -0.61
USP28-204ENST00000537642 ZNF502Q8TBZ5 544 aa11.22□□□□□ -0.61
USP28-204ENST00000537642 MARCH1Q8TCQ1 289 aa11.22□□□□□ -0.61
USP28-204ENST00000537642 TP53RKQ96S44 253 aa11.22□□□□□ -0.61
USP28-204ENST00000537642 NXF2Q9GZY0 626 aaKnown RBP11.22□□□□□ -0.61
USP28-204ENST00000537642 FKBP11Q9NYL4 201 aa11.22□□□□□ -0.61
USP28-204ENST00000537642 RABL2AQ9UBK7 228 aaPredicted RBP11.22□□□□□ -0.61
USP28-204ENST00000537642 RABL2BQ9UNT1 228 aa11.22□□□□□ -0.61
USP28-204ENST00000537642 F11RQ9Y624 299 aaKnown RBP11.22□□□□□ -0.61
USP28-204ENST00000537642 C2orf70A6NJV1 201 aa11.21□□□□□ -0.61
USP28-204ENST00000537642 LGALS9O00182 355 aa11.21□□□□□ -0.61
USP28-204ENST00000537642 CLEC3BP05452 202 aa11.21□□□□□ -0.61
USP28-204ENST00000537642 MEF2DQ14814 521 aa11.21□□□□□ -0.61
USP28-204ENST00000537642 Q8N402 240 aa11.21□□□□□ -0.61
USP28-204ENST00000537642 OR4A16Q8NH70 328 aa11.21□□□□□ -0.61
USP28-204ENST00000537642 ZFAND1Q8TCF1 268 aa11.21□□□□□ -0.61
USP28-204ENST00000537642 TMEM56Q96MV1 263 aa11.21□□□□□ -0.61
USP28-204ENST00000537642 SOSTQ9BQB4 213 aa11.21□□□□□ -0.61
USP28-204ENST00000537642 THAP7Q9BT49 309 aaPredicted RBP11.21□□□□□ -0.61
USP28-204ENST00000537642 ZC4H2Q9NQZ6 224 aa11.21□□□□□ -0.61
USP28-204ENST00000537642 THYN1Q9P016 225 aa11.21□□□□□ -0.61
USP28-204ENST00000537642 C3orf85A0A1B0GTC6 90 aa11.2□□□□□ -0.62
USP28-204ENST00000537642 CYB5BO43169 146 aa11.2□□□□□ -0.62
USP28-204ENST00000537642 GSTZ1O43708 216 aaPredicted RBP11.2□□□□□ -0.62
USP28-204ENST00000537642 IGKV1-5P01602 117 aa11.2□□□□□ -0.62
USP28-204ENST00000537642 CTSDP07339 412 aaPredicted RBP11.2□□□□□ -0.62
USP28-204ENST00000537642 FRMD6-AS1P0C7T7 363 aa11.2□□□□□ -0.62
USP28-204ENST00000537642 FOLR2P14207 255 aa11.2□□□□□ -0.62
USP28-204ENST00000537642 GPR183P32249 361 aa11.2□□□□□ -0.62
USP28-204ENST00000537642 TNFSF8P32971 234 aa11.2□□□□□ -0.62
USP28-204ENST00000537642 IZUMO4Q1ZYL8 232 aa11.2□□□□□ -0.62
USP28-204ENST00000537642 LCN12Q6JVE5 192 aa11.2□□□□□ -0.62
USP28-204ENST00000537642 SBSPONQ8IVN8 264 aa11.2□□□□□ -0.62
USP28-204ENST00000537642 OR4C16Q8NGL9 310 aa11.2□□□□□ -0.62
USP28-204ENST00000537642 OR2K2Q8NGT1 345 aa11.2□□□□□ -0.62
USP28-204ENST00000537642 MCFD2Q8NI22 146 aa11.2□□□□□ -0.62
USP28-204ENST00000537642 VN1R17PQ8TDU5 208 aa11.2□□□□□ -0.62
USP28-204ENST00000537642 COPZ2Q9P299 210 aa11.2□□□□□ -0.62
USP28-204ENST00000537642 U3KQK5 164 aa11.2□□□□□ -0.62
USP28-204ENST00000537642 IGHV3-21A0A0B4J1V1 117 aa11.19□□□□□ -0.62
USP28-204ENST00000537642 DISC1C4P0D8 188 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms