RNA–Protein interactions for RNA: ENST00000534885.5

TNFRSF1A-205, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best)

Gene TNFRSF1A, Length 2,069 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-205ENST00000534885 TEX45Q8NA69 505 aa16.28■□□□□ 0.2
TNFRSF1A-205ENST00000534885 OR5B3Q8NH48 314 aa16.28■□□□□ 0.2
TNFRSF1A-205ENST00000534885 RNF5Q99942 180 aa16.28■□□□□ 0.2
TNFRSF1A-205ENST00000534885 COMMD5Q9GZQ3 224 aa16.28■□□□□ 0.2
TNFRSF1A-205ENST00000534885 FBXL15Q9H469 300 aa16.28■□□□□ 0.2
TNFRSF1A-205ENST00000534885 METTL1Q9UBP6 276 aaKnown RBP16.28■□□□□ 0.2
TNFRSF1A-205ENST00000534885 CSPG4Q6UVK1 2322 aa16.27■□□□□ 0.2
TNFRSF1A-205ENST00000534885 ABCA1O95477 2261 aa16.27■□□□□ 0.2
TNFRSF1A-205ENST00000534885 SCO1O75880 301 aa16.27■□□□□ 0.2
TNFRSF1A-205ENST00000534885 TPT1P13693 172 aaKnown RBP16.27■□□□□ 0.2
TNFRSF1A-205ENST00000534885 CTAG1AP78358 180 aa16.27■□□□□ 0.2
TNFRSF1A-205ENST00000534885 PRCDQ00LT1 54 aa16.27■□□□□ 0.2
TNFRSF1A-205ENST00000534885 MMDQ15546 238 aa16.27■□□□□ 0.2
TNFRSF1A-205ENST00000534885 MED9Q9NWA0 146 aa16.27■□□□□ 0.2
TNFRSF1A-205ENST00000534885 STRAPQ9Y3F4 350 aaKnown RBP16.27■□□□□ 0.2
TNFRSF1A-205ENST00000534885 C15orf62A8K5M9 175 aa16.26■□□□□ 0.19
TNFRSF1A-205ENST00000534885 OR8G2PQ6IF36 304 aa16.26■□□□□ 0.19
TNFRSF1A-205ENST00000534885 BAP18Q8IXM2 172 aa16.26■□□□□ 0.19
TNFRSF1A-205ENST00000534885 HIPK2Q9H2X6 1198 aa16.26■□□□□ 0.19
TNFRSF1A-205ENST00000534885 KLF17Q5JT82 389 aaPredicted RBP16.26■□□□□ 0.19
TNFRSF1A-205ENST00000534885 OR10W1Q8NGF6 305 aa16.26■□□□□ 0.19
TNFRSF1A-205ENST00000534885 OR2T10Q8NGZ9 312 aa16.26■□□□□ 0.19
TNFRSF1A-205ENST00000534885 SCARB1Q8WTV0 552 aa16.26■□□□□ 0.19
TNFRSF1A-205ENST00000534885 CLCC1Q96S66 551 aa16.26■□□□□ 0.19
TNFRSF1A-205ENST00000534885 NAV3Q8IVL0 2385 aa16.25■□□□□ 0.19
TNFRSF1A-205ENST00000534885 CGB1A6NKQ9 187 aa16.25■□□□□ 0.19
TNFRSF1A-205ENST00000534885 JTBO76095 146 aa16.25■□□□□ 0.19
TNFRSF1A-205ENST00000534885 PRSS8Q16651 343 aa16.25■□□□□ 0.19
TNFRSF1A-205ENST00000534885 FAM120AOSQ5T036 256 aa16.25■□□□□ 0.19
TNFRSF1A-205ENST00000534885 PPP1R27Q86WC6 154 aa16.25■□□□□ 0.19
TNFRSF1A-205ENST00000534885 OR1S2Q8NGQ3 325 aa16.25■□□□□ 0.19
TNFRSF1A-205ENST00000534885 PLEKHA3Q9HB20 300 aa16.25■□□□□ 0.19
TNFRSF1A-205ENST00000534885 NDUFA4L2Q9NRX3 87 aa16.25■□□□□ 0.19
TNFRSF1A-205ENST00000534885 A0A1B0GW64 132 aa16.25■□□□□ 0.19
TNFRSF1A-205ENST00000534885 PMS2P5A8MQ11 134 aa16.25■□□□□ 0.19
TNFRSF1A-205ENST00000534885 RRHO14718 337 aa16.25■□□□□ 0.19
TNFRSF1A-205ENST00000534885 NBR2O15453 112 aa16.25■□□□□ 0.19
TNFRSF1A-205ENST00000534885 IFNA10P01566 189 aa16.25■□□□□ 0.19
TNFRSF1A-205ENST00000534885 UBAC2Q8NBM4 344 aa16.25■□□□□ 0.19
TNFRSF1A-205ENST00000534885 OR1L8Q8NGR8 309 aa16.25■□□□□ 0.19
TNFRSF1A-205ENST00000534885 TMEM170AQ8WVE7 144 aa16.25■□□□□ 0.19
TNFRSF1A-205ENST00000534885 SOX21Q9Y651 276 aaPredicted RBP16.25■□□□□ 0.19
TNFRSF1A-205ENST00000534885 MFSD2BA6NFX1 497 aa16.24■□□□□ 0.19
TNFRSF1A-205ENST00000534885 NMBP08949 121 aa16.24■□□□□ 0.19
TNFRSF1A-205ENST00000534885 EBI3Q14213 229 aa16.24■□□□□ 0.19
TNFRSF1A-205ENST00000534885 FAM74A1Q5RGS3 127 aa16.24■□□□□ 0.19
TNFRSF1A-205ENST00000534885 MMD2Q8IY49 270 aa16.24■□□□□ 0.19
TNFRSF1A-205ENST00000534885 ENY2Q9NPA8 101 aa16.24■□□□□ 0.19
TNFRSF1A-205ENST00000534885 A0A0U1RQK1 487 aa16.23■□□□□ 0.19
TNFRSF1A-205ENST00000534885 FCN1O00602 326 aa16.23■□□□□ 0.19
TNFRSF1A-205ENST00000534885 PLGLAQ15195 96 aa16.23■□□□□ 0.19
TNFRSF1A-205ENST00000534885 TNXAQ16473 311 aa16.23■□□□□ 0.19
TNFRSF1A-205ENST00000534885 CIARTQ8N365 385 aaPredicted RBP16.23■□□□□ 0.19
TNFRSF1A-205ENST00000534885 STPG2Q8N412 459 aa16.23■□□□□ 0.19
TNFRSF1A-205ENST00000534885 Q8N6K4 173 aa16.23■□□□□ 0.19
TNFRSF1A-205ENST00000534885 NPBQ8NG41 125 aa16.23■□□□□ 0.19
TNFRSF1A-205ENST00000534885 TEX15Q9BXT5 2789 aa16.23■□□□□ 0.19
TNFRSF1A-205ENST00000534885 NDUFA3O95167 84 aa16.23■□□□□ 0.19
TNFRSF1A-205ENST00000534885 LY86O95711 162 aa16.23■□□□□ 0.19
TNFRSF1A-205ENST00000534885 HBG1P69891 147 aa16.23■□□□□ 0.19
TNFRSF1A-205ENST00000534885 HBG2P69892 147 aa16.23■□□□□ 0.19
TNFRSF1A-205ENST00000534885 TMED6Q8WW62 240 aa16.23■□□□□ 0.19
TNFRSF1A-205ENST00000534885 ATP5SQ99766 215 aa16.23■□□□□ 0.19
TNFRSF1A-205ENST00000534885 BORCS7-ASMTA0A0B4J1R7 106 aa16.22■□□□□ 0.19
TNFRSF1A-205ENST00000534885 ZP3P21754 424 aa16.22■□□□□ 0.19
TNFRSF1A-205ENST00000534885 BRS3P32247 399 aa16.22■□□□□ 0.19
TNFRSF1A-205ENST00000534885 GNB1P62873 340 aa16.22■□□□□ 0.19
TNFRSF1A-205ENST00000534885 SSBP2P81877 361 aaPredicted RBP16.22■□□□□ 0.19
TNFRSF1A-205ENST00000534885 SLC38A11Q08AI6 406 aa16.22■□□□□ 0.19
TNFRSF1A-205ENST00000534885 PHYHIPLQ96FC7 376 aa16.22■□□□□ 0.19
TNFRSF1A-205ENST00000534885 CXorf58Q96LI9 332 aa16.22■□□□□ 0.19
TNFRSF1A-205ENST00000534885 AKAP9Q99996 3911 aa16.22■□□□□ 0.19
TNFRSF1A-205ENST00000534885 J3QLI3 93 aa16.22■□□□□ 0.19
TNFRSF1A-205ENST00000534885 ACTL6BO94805 426 aa16.22■□□□□ 0.19
TNFRSF1A-205ENST00000534885 TMEM11P17152 192 aa16.22■□□□□ 0.19
TNFRSF1A-205ENST00000534885 ZNF266Q14584 549 aa16.22■□□□□ 0.19
TNFRSF1A-205ENST00000534885 LILRB2Q8N423 598 aa16.22■□□□□ 0.19
TNFRSF1A-205ENST00000534885 HSD17B11Q8NBQ5 300 aa16.22■□□□□ 0.19
TNFRSF1A-205ENST00000534885 SLC24A4Q8NFF2 622 aa16.22■□□□□ 0.19
TNFRSF1A-205ENST00000534885 KIAA1456Q9P272 454 aa16.22■□□□□ 0.19
TNFRSF1A-205ENST00000534885 ZMAT5Q9UDW3 170 aaKnown RBP16.22■□□□□ 0.19
TNFRSF1A-205ENST00000534885 FBXO24O75426 580 aa16.21■□□□□ 0.19
TNFRSF1A-205ENST00000534885 FAM106CPP0CH98 169 aa16.21■□□□□ 0.19
TNFRSF1A-205ENST00000534885 EIF5AP63241 154 aaKnown RBP16.21■□□□□ 0.19
TNFRSF1A-205ENST00000534885 ARV1Q9H2C2 271 aa16.21■□□□□ 0.19
TNFRSF1A-205ENST00000534885 PFDN2Q9UHV9 154 aa16.21■□□□□ 0.19
TNFRSF1A-205ENST00000534885 FLNAP21333 2647 aaKnown RBP16.21■□□□□ 0.18
TNFRSF1A-205ENST00000534885 NCBP2LA6PVI3 153 aaKnown RBP16.2■□□□□ 0.18
TNFRSF1A-205ENST00000534885 CA2P00918 260 aa16.2■□□□□ 0.18
TNFRSF1A-205ENST00000534885 OR8U8P0C7N1 319 aa16.2■□□□□ 0.18
TNFRSF1A-205ENST00000534885 NPY1RP25929 384 aa16.2■□□□□ 0.18
TNFRSF1A-205ENST00000534885 COMPP49747 757 aaPredicted RBP16.2■□□□□ 0.18
TNFRSF1A-205ENST00000534885 RPP30P78346 268 aaKnown RBP16.2■□□□□ 0.18
TNFRSF1A-205ENST00000534885 WT1-ASQ06250 92 aa16.2■□□□□ 0.18
TNFRSF1A-205ENST00000534885 OR10P1Q8NGE3 313 aa16.2■□□□□ 0.18
TNFRSF1A-205ENST00000534885 FOXC2Q99958 501 aa16.2■□□□□ 0.18
TNFRSF1A-205ENST00000534885 RPL27AP46776 148 aaKnown RBP16.2■□□□□ 0.18
TNFRSF1A-205ENST00000534885 C5orf64Q2M2E5 130 aa16.2■□□□□ 0.18
TNFRSF1A-205ENST00000534885 SH3BGRL3Q9H299 93 aa16.2■□□□□ 0.18
TNFRSF1A-205ENST00000534885 DFFBO76075 338 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms