RNA–Protein interactions for RNA: ENST00000533705.5

UBQLN1-206, Transcript of ubiquilin 1, humanhuman

TSL 1 (best)

Gene UBQLN1, Length 6,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-206ENST00000533705 MYOD1P15172 320 aa5.37□□□□□ -1.55
UBQLN1-206ENST00000533705 GCHFRP30047 84 aa5.37□□□□□ -1.55
UBQLN1-206ENST00000533705 TIMP3P35625 211 aa5.37□□□□□ -1.55
UBQLN1-206ENST00000533705 RPL24P83731 157 aaKnown RBP5.37□□□□□ -1.55
UBQLN1-206ENST00000533705 DEFB121Q5J5C9 76 aa5.37□□□□□ -1.55
UBQLN1-206ENST00000533705 DMRTA2Q96SC8 542 aa5.37□□□□□ -1.55
UBQLN1-206ENST00000533705 IGHV1-18A0A0C4DH31 117 aa5.37□□□□□ -1.55
UBQLN1-206ENST00000533705 PQLC2LA1A4F0 135 aa5.37□□□□□ -1.55
UBQLN1-206ENST00000533705 H3BVH4 76 aa5.37□□□□□ -1.55
UBQLN1-206ENST00000533705 H7C1H1 209 aa5.37□□□□□ -1.55
UBQLN1-206ENST00000533705 PRSS2P07478 247 aa5.37□□□□□ -1.55
UBQLN1-206ENST00000533705 IL6RP08887 468 aaPredicted RBP5.37□□□□□ -1.55
UBQLN1-206ENST00000533705 NBEAP1P0C6P0 100 aa5.37□□□□□ -1.55
UBQLN1-206ENST00000533705 IFITM3Q01628 133 aa5.37□□□□□ -1.55
UBQLN1-206ENST00000533705 WFIKKN1Q96NZ8 548 aa5.37□□□□□ -1.55
UBQLN1-206ENST00000533705 ATG101Q9BSB4 218 aa5.37□□□□□ -1.55
UBQLN1-206ENST00000533705 TMEM133Q9H2Q1 129 aa5.37□□□□□ -1.55
UBQLN1-206ENST00000533705 H7C2G1 150 aa5.36□□□□□ -1.55
UBQLN1-206ENST00000533705 NPIPB7O75200 414 aa5.36□□□□□ -1.55
UBQLN1-206ENST00000533705 IL18BPO95998 194 aa5.36□□□□□ -1.55
UBQLN1-206ENST00000533705 PPP1R17O96001 155 aa5.36□□□□□ -1.55
UBQLN1-206ENST00000533705 COX6CP09669 75 aa5.36□□□□□ -1.55
UBQLN1-206ENST00000533705 MRPL13Q9BYD1 178 aaKnown RBP5.36□□□□□ -1.55
UBQLN1-206ENST00000533705 MSRB2Q9Y3D2 182 aa5.36□□□□□ -1.55
UBQLN1-206ENST00000533705 SPTAN1Q13813 2472 aaKnown RBP5.36□□□□□ -1.55
UBQLN1-206ENST00000533705 CIRBPQ14011 172 aaKnown RBP5.36□□□□□ -1.55
UBQLN1-206ENST00000533705 MEIG1Q5JSS6 88 aa5.36□□□□□ -1.55
UBQLN1-206ENST00000533705 TEX45Q8NA69 505 aa5.36□□□□□ -1.55
UBQLN1-206ENST00000533705 WNT10AQ9GZT5 417 aa5.36□□□□□ -1.55
UBQLN1-206ENST00000533705 PAM16Q9Y3D7 125 aa5.36□□□□□ -1.55
UBQLN1-206ENST00000533705 TMEM238LA0A1B0GVL6 79 aa5.36□□□□□ -1.55
UBQLN1-206ENST00000533705 A6NJY4 79 aa5.36□□□□□ -1.55
UBQLN1-206ENST00000533705 F12P00748 615 aaPredicted RBP5.36□□□□□ -1.55
UBQLN1-206ENST00000533705 ASIPP42127 132 aa5.36□□□□□ -1.55
UBQLN1-206ENST00000533705 EFNA4P52798 201 aa5.36□□□□□ -1.55
UBQLN1-206ENST00000533705 ZNF660Q6AZW8 331 aaPredicted RBP5.36□□□□□ -1.55
UBQLN1-206ENST00000533705 PET117Q6UWS5 81 aa5.36□□□□□ -1.55
UBQLN1-206ENST00000533705 STHQ8IWL8 128 aa5.36□□□□□ -1.55
UBQLN1-206ENST00000533705 HIST1H2BAQ96A08 127 aa5.36□□□□□ -1.55
UBQLN1-206ENST00000533705 SLC25A28Q96A46 364 aa5.36□□□□□ -1.55
UBQLN1-206ENST00000533705 GGACTQ9BVM4 153 aa5.36□□□□□ -1.55
UBQLN1-206ENST00000533705 TNFRSF18Q9Y5U5 241 aa5.36□□□□□ -1.55
UBQLN1-206ENST00000533705 A0A1B0GTI1 187 aa5.36□□□□□ -1.55
UBQLN1-206ENST00000533705 M0R381 172 aa5.36□□□□□ -1.55
UBQLN1-206ENST00000533705 TBX6O95947 436 aaPredicted RBP5.36□□□□□ -1.55
UBQLN1-206ENST00000533705 LGALS3P17931 250 aaKnown RBP5.36□□□□□ -1.55
UBQLN1-206ENST00000533705 C2orf68Q2NKX9 166 aa5.36□□□□□ -1.55
UBQLN1-206ENST00000533705 ZNF672Q499Z4 452 aaPredicted RBP5.36□□□□□ -1.55
UBQLN1-206ENST00000533705 SAMD13Q5VXD3 122 aa5.36□□□□□ -1.55
UBQLN1-206ENST00000533705 WDR82Q6UXN9 313 aa5.36□□□□□ -1.55
UBQLN1-206ENST00000533705 PSMG3Q9BT73 122 aaPredicted RBP5.36□□□□□ -1.55
UBQLN1-206ENST00000533705 COL25A1Q9BXS0 654 aaPredicted RBP5.36□□□□□ -1.55
UBQLN1-206ENST00000533705 TRBV20OR9-2A0A075B6H5 130 aa5.36□□□□□ -1.55
UBQLN1-206ENST00000533705 C19orf67A6NJJ6 358 aa5.36□□□□□ -1.55
UBQLN1-206ENST00000533705 RBFOX2O43251 390 aaKnown RBP eCLIP5.36□□□□□ -1.556e-7■■■■□ 24
UBQLN1-206ENST00000533705 LEPROTL1O95214 131 aa5.36□□□□□ -1.55
UBQLN1-206ENST00000533705 TAS2R60P59551 318 aa5.36□□□□□ -1.55
UBQLN1-206ENST00000533705 SUMO2P61956 95 aaKnown RBP5.36□□□□□ -1.55
UBQLN1-206ENST00000533705 SRSF6Q13247 344 aaKnown RBP5.36□□□□□ -1.55
UBQLN1-206ENST00000533705 FAM166AQ6J272 317 aa5.36□□□□□ -1.55
UBQLN1-206ENST00000533705 PLPPR1Q8TBJ4 325 aa5.36□□□□□ -1.55
UBQLN1-206ENST00000533705 MARVELD3Q96A59 401 aa5.36□□□□□ -1.55
UBQLN1-206ENST00000533705 SH3BGRL3Q9H299 93 aa5.36□□□□□ -1.55
UBQLN1-206ENST00000533705 PLSCR2Q9NRY7 297 aa5.36□□□□□ -1.55
UBQLN1-206ENST00000533705 ZMAT5Q9UDW3 170 aaKnown RBP5.36□□□□□ -1.55
UBQLN1-206ENST00000533705 PLXNA1Q9UIW2 1896 aa5.35□□□□□ -1.55
UBQLN1-206ENST00000533705 NBASA2RRP1 2371 aa5.35□□□□□ -1.55
UBQLN1-206ENST00000533705 TRAV24A0A0B4J272 114 aa5.35□□□□□ -1.55
UBQLN1-206ENST00000533705 UCP1P25874 307 aa5.35□□□□□ -1.55
UBQLN1-206ENST00000533705 RND3P61587 244 aa5.35□□□□□ -1.55
UBQLN1-206ENST00000533705 LDLRAD2Q5SZI1 272 aa5.35□□□□□ -1.55
UBQLN1-206ENST00000533705 C20orf204Q6ZNR8 217 aa5.35□□□□□ -1.55
UBQLN1-206ENST00000533705 RNASEH2CQ8TDP1 164 aaKnown RBP5.35□□□□□ -1.55
UBQLN1-206ENST00000533705 TMEM101Q96IK0 257 aa5.35□□□□□ -1.55
UBQLN1-206ENST00000533705 TRAF4Q9BUZ4 470 aaPredicted RBP5.35□□□□□ -1.55
UBQLN1-206ENST00000533705 TRAV20A0A0B4J274 112 aa5.35□□□□□ -1.55
UBQLN1-206ENST00000533705 TFF1P04155 84 aa5.35□□□□□ -1.55
UBQLN1-206ENST00000533705 IGFBP2P18065 325 aa5.35□□□□□ -1.55
UBQLN1-206ENST00000533705 AGAP20933 346 aa5.35□□□□□ -1.55
UBQLN1-206ENST00000533705 BRCA1P38398 1863 aaKnown RBP5.35□□□□□ -1.55
UBQLN1-206ENST00000533705 CACNG8Q8WXS5 425 aa5.35□□□□□ -1.55
UBQLN1-206ENST00000533705 IFT22Q9H7X7 185 aa5.35□□□□□ -1.55
UBQLN1-206ENST00000533705 LINC00527Q9UJ94 153 aa5.35□□□□□ -1.55
UBQLN1-206ENST00000533705 SAA2-SAA4A0A096LPE2 208 aa5.35□□□□□ -1.55
UBQLN1-206ENST00000533705 YPEL1O60688 119 aa5.35□□□□□ -1.55
UBQLN1-206ENST00000533705 WNT2P09544 360 aa5.35□□□□□ -1.55
UBQLN1-206ENST00000533705 SAA1P0DJI8 122 aaPredicted RBP5.35□□□□□ -1.55
UBQLN1-206ENST00000533705 SAA2P0DJI9 122 aaPredicted RBP5.35□□□□□ -1.55
UBQLN1-206ENST00000533705 H2BFSP57053 126 aa5.35□□□□□ -1.55
UBQLN1-206ENST00000533705 CYB5R2Q6BCY4 276 aa5.35□□□□□ -1.55
UBQLN1-206ENST00000533705 GTSCR1Q86UQ5 136 aa5.35□□□□□ -1.55
UBQLN1-206ENST00000533705 ARL6IP6Q8N6S5 226 aa5.35□□□□□ -1.55
UBQLN1-206ENST00000533705 COPS9Q8WXC6 57 aa5.35□□□□□ -1.55
UBQLN1-206ENST00000533705 YPEL2Q96QA6 119 aa5.35□□□□□ -1.55
UBQLN1-206ENST00000533705 HSPB9Q9BQS6 159 aa5.35□□□□□ -1.55
UBQLN1-206ENST00000533705 MRPL18Q9H0U6 180 aaKnown RBP5.35□□□□□ -1.55
UBQLN1-206ENST00000533705 GPR179Q6PRD1 2367 aa5.35□□□□□ -1.55
UBQLN1-206ENST00000533705 HLA-DRB1P01911 266 aa5.35□□□□□ -1.55
UBQLN1-206ENST00000533705 NMBP08949 121 aa5.35□□□□□ -1.55
UBQLN1-206ENST00000533705 GPX4P36969 197 aaPredicted RBP5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms