RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 RPL35AP18077 110 aaKnown RBP13.65□□□□□ -0.22
SSSCA1-206ENST00000531405 SDC2P34741 201 aa13.65□□□□□ -0.22
SSSCA1-206ENST00000531405 GABARAPL2P60520 117 aa13.65□□□□□ -0.22
SSSCA1-206ENST00000531405 MXD1Q05195 221 aa13.65□□□□□ -0.22
SSSCA1-206ENST00000531405 CATR1Q13166 79 aa13.65□□□□□ -0.22
SSSCA1-206ENST00000531405 TMEM17Q86X19 198 aa13.65□□□□□ -0.22
SSSCA1-206ENST00000531405 ZBTB34Q8NCN2 500 aa13.65□□□□□ -0.22
SSSCA1-206ENST00000531405 VCX3BQ9H321 246 aa13.65□□□□□ -0.22
SSSCA1-206ENST00000531405 ZNF207O43670 478 aaKnown RBP13.64□□□□□ -0.23
SSSCA1-206ENST00000531405 OR13C7P0DN81 318 aa13.64□□□□□ -0.23
SSSCA1-206ENST00000531405 HSPA13P48723 471 aa13.64□□□□□ -0.23
SSSCA1-206ENST00000531405 MFAP2P55001 183 aa13.64□□□□□ -0.23
SSSCA1-206ENST00000531405 WT1-ASQ06250 92 aa13.64□□□□□ -0.23
SSSCA1-206ENST00000531405 SLC25A24Q6NUK1 477 aa13.64□□□□□ -0.23
SSSCA1-206ENST00000531405 SPARTQ8N0X7 666 aa13.64□□□□□ -0.23
SSSCA1-206ENST00000531405 GDPD1Q8N9F7 314 aa13.64□□□□□ -0.23
SSSCA1-206ENST00000531405 VN1R17PQ8TDU5 208 aa13.64□□□□□ -0.23
SSSCA1-206ENST00000531405 SRSF8Q9BRL6 282 aaKnown RBP13.64□□□□□ -0.23
SSSCA1-206ENST00000531405 CHRDL1Q9BU40 450 aa13.64□□□□□ -0.23
SSSCA1-206ENST00000531405 RNF167Q9H6Y7 350 aa13.64□□□□□ -0.23
SSSCA1-206ENST00000531405 DAZ1Q9NQZ3 744 aaKnown RBP13.64□□□□□ -0.23
SSSCA1-206ENST00000531405 SSR3Q9UNL2 185 aa13.64□□□□□ -0.23
SSSCA1-206ENST00000531405 VPS13DQ5THJ4 4388 aa13.64□□□□□ -0.23
SSSCA1-206ENST00000531405 TEX50A0A1B0GTY4 177 aa13.63□□□□□ -0.23
SSSCA1-206ENST00000531405 MEIS3P1A6NDR6 274 aa13.63□□□□□ -0.23
SSSCA1-206ENST00000531405 SERPINE2P07093 398 aa13.63□□□□□ -0.23
SSSCA1-206ENST00000531405 TRAPPC2P0DI81 140 aa13.63□□□□□ -0.23
SSSCA1-206ENST00000531405 TRAPPC2BP0DI82 140 aa13.63□□□□□ -0.23
SSSCA1-206ENST00000531405 AADACL3Q5VUY0 350 aa13.63□□□□□ -0.23
SSSCA1-206ENST00000531405 RPP25LQ8N5L8 163 aaKnown RBP13.63□□□□□ -0.23
SSSCA1-206ENST00000531405 RNF183Q96D59 192 aa13.63□□□□□ -0.23
SSSCA1-206ENST00000531405 C20orf24Q9BUV8 137 aa13.63□□□□□ -0.23
SSSCA1-206ENST00000531405 KRTAP17-1Q9BYP8 105 aa13.63□□□□□ -0.23
SSSCA1-206ENST00000531405 PLEKHA2Q9HB19 425 aa13.63□□□□□ -0.23
SSSCA1-206ENST00000531405 UBE2CO00762 179 aa13.62□□□□□ -0.23
SSSCA1-206ENST00000531405 IDNKQ5T6J7 187 aa13.62□□□□□ -0.23
SSSCA1-206ENST00000531405 STPG3Q8N7X2 389 aa13.62□□□□□ -0.23
SSSCA1-206ENST00000531405 OR5B3Q8NH48 314 aa13.62□□□□□ -0.23
SSSCA1-206ENST00000531405 BSCL2Q96G97 398 aaPredicted RBP13.62□□□□□ -0.23
SSSCA1-206ENST00000531405 HINT2Q9BX68 163 aa13.62□□□□□ -0.23
SSSCA1-206ENST00000531405 AUNIPQ9H7T9 357 aa13.62□□□□□ -0.23
SSSCA1-206ENST00000531405 KIR2DL5BA0A0G2JN68 375 aa13.61□□□□□ -0.23
SSSCA1-206ENST00000531405 KIR2DL5BA0A0G2JPC4 375 aa13.61□□□□□ -0.23
SSSCA1-206ENST00000531405 F8W735 103 aaPredicted RBP13.61□□□□□ -0.23
SSSCA1-206ENST00000531405 CYB5BO43169 146 aa13.61□□□□□ -0.23
SSSCA1-206ENST00000531405 MRPS14O60783 128 aaKnown RBP13.61□□□□□ -0.23
SSSCA1-206ENST00000531405 FCGR2BP31994 310 aaPredicted RBP13.61□□□□□ -0.23
SSSCA1-206ENST00000531405 ZNF124Q15973 351 aa13.61□□□□□ -0.23
SSSCA1-206ENST00000531405 LAMTOR1Q6IAA8 161 aa13.61□□□□□ -0.23
SSSCA1-206ENST00000531405 APRG1Q8IVJ8 170 aa13.61□□□□□ -0.23
SSSCA1-206ENST00000531405 KIR2DL5AQ8N109 375 aa13.61□□□□□ -0.23
SSSCA1-206ENST00000531405 UBAC2Q8NBM4 344 aa13.61□□□□□ -0.23
SSSCA1-206ENST00000531405 OR5AP2Q8NGF4 316 aa13.61□□□□□ -0.23
SSSCA1-206ENST00000531405 KIR2DL5BQ8NHK3 375 aa13.61□□□□□ -0.23
SSSCA1-206ENST00000531405 SCARB1Q8WTV0 552 aa13.61□□□□□ -0.23
SSSCA1-206ENST00000531405 GIMAP1Q8WWP7 306 aa13.61□□□□□ -0.23
SSSCA1-206ENST00000531405 COMMD9Q9P000 198 aa13.61□□□□□ -0.23
SSSCA1-206ENST00000531405 RAB26Q9ULW5 256 aa13.61□□□□□ -0.23
SSSCA1-206ENST00000531405 NSG2Q9Y328 171 aa13.61□□□□□ -0.23
SSSCA1-206ENST00000531405 KLK5Q9Y337 293 aaPredicted RBP13.61□□□□□ -0.23
SSSCA1-206ENST00000531405 ETV7Q9Y603 341 aa13.61□□□□□ -0.23
SSSCA1-206ENST00000531405 MARCH11A6NNE9 402 aa13.6□□□□□ -0.23
SSSCA1-206ENST00000531405 NDUFA4O00483 81 aa13.6□□□□□ -0.23
SSSCA1-206ENST00000531405 DEDDO75618 318 aa13.6□□□□□ -0.23
SSSCA1-206ENST00000531405 RLN1P04808 185 aa13.6□□□□□ -0.23
SSSCA1-206ENST00000531405 CTSDP07339 412 aaPredicted RBP13.6□□□□□ -0.23
SSSCA1-206ENST00000531405 FGF2P09038 288 aa13.6□□□□□ -0.23
SSSCA1-206ENST00000531405 GNRHRP30968 328 aa13.6□□□□□ -0.23
SSSCA1-206ENST00000531405 ADMP35318 185 aa13.6□□□□□ -0.23
SSSCA1-206ENST00000531405 HERV-K104P61576 105 aa13.6□□□□□ -0.23
SSSCA1-206ENST00000531405 THOC7Q6I9Y2 204 aaKnown RBP13.6□□□□□ -0.23
SSSCA1-206ENST00000531405 SPSB3Q6PJ21 355 aa13.6□□□□□ -0.23
SSSCA1-206ENST00000531405 OR1L8Q8NGR8 309 aa13.6□□□□□ -0.23
SSSCA1-206ENST00000531405 CD300LFQ8TDQ1 290 aa13.6□□□□□ -0.23
SSSCA1-206ENST00000531405 MAP6D1Q9H9H5 199 aa13.6□□□□□ -0.23
SSSCA1-206ENST00000531405 NDUFA4L2Q9NRX3 87 aa13.6□□□□□ -0.23
SSSCA1-206ENST00000531405 C21orf62Q9NYP8 219 aa13.6□□□□□ -0.23
SSSCA1-206ENST00000531405 F11RQ9Y624 299 aaKnown RBP13.6□□□□□ -0.23
SSSCA1-206ENST00000531405 HECTD4Q9Y4D8 3996 aa13.6□□□□□ -0.23
SSSCA1-206ENST00000531405 DNAH6Q9C0G6 4158 aa13.59□□□□□ -0.23
SSSCA1-206ENST00000531405 LOC100506127A0A0U1RQW1 187 aa13.59□□□□□ -0.23
SSSCA1-206ENST00000531405 OR4C46A6NHA9 309 aa13.59□□□□□ -0.23
SSSCA1-206ENST00000531405 K7EIM0 57 aa13.59□□□□□ -0.23
SSSCA1-206ENST00000531405 SCAND1P57086 179 aa13.59□□□□□ -0.23
SSSCA1-206ENST00000531405 ERVK-16P61578 105 aa13.59□□□□□ -0.23
SSSCA1-206ENST00000531405 FCGR1BQ92637 280 aa13.59□□□□□ -0.23
SSSCA1-206ENST00000531405 LSM10Q969L4 123 aaKnown RBP13.59□□□□□ -0.23
SSSCA1-206ENST00000531405 GALNT14Q96FL9 552 aa13.59□□□□□ -0.23
SSSCA1-206ENST00000531405 ZNF414Q96IQ9 312 aa13.59□□□□□ -0.23
SSSCA1-206ENST00000531405 EHFQ9NZC4 300 aa13.59□□□□□ -0.23
SSSCA1-206ENST00000531405 IGHV3-49A0A0A0MS15 119 aa13.58□□□□□ -0.24
SSSCA1-206ENST00000531405 A0A0A6YYH2 397 aa13.58□□□□□ -0.24
SSSCA1-206ENST00000531405 A6NJ64 397 aa13.58□□□□□ -0.24
SSSCA1-206ENST00000531405 KRASP01116 189 aa13.58□□□□□ -0.24
SSSCA1-206ENST00000531405 ATF4P18848 351 aaPredicted RBP13.58□□□□□ -0.24
SSSCA1-206ENST00000531405 G6PCP35575 357 aa13.58□□□□□ -0.24
SSSCA1-206ENST00000531405 Q56UQ5 140 aa13.58□□□□□ -0.24
SSSCA1-206ENST00000531405 HSD17B13Q7Z5P4 300 aaPredicted RBP13.58□□□□□ -0.24
SSSCA1-206ENST00000531405 PHLDA1Q8WV24 401 aaPredicted RBP13.58□□□□□ -0.24
SSSCA1-206ENST00000531405 FCAMRQ8WWV6 532 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms