RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 CHD3Q12873 2000 aaKnown RBP15.08■□□□□ 0
SDC2-202ENST00000518385 KALRNO60229 2985 aa15.08■□□□□ 0
SDC2-202ENST00000518385 GRNP28799 593 aaKnown RBP15.08■□□□□ 0
SDC2-202ENST00000518385 TFF3Q07654 80 aa15.08■□□□□ 0
SDC2-202ENST00000518385 ADIPOQQ15848 244 aa15.08■□□□□ 0
SDC2-202ENST00000518385 MRGPRDQ8TDS7 321 aa15.08■□□□□ 0
SDC2-202ENST00000518385 SFRP2Q96HF1 295 aa15.08■□□□□ 0
SDC2-202ENST00000518385 OR2D2Q9H210 308 aa15.08■□□□□ 0
SDC2-202ENST00000518385 CADP27708 2225 aa15.08■□□□□ 0
SDC2-202ENST00000518385 C17orf100A8MU93 164 aa15.07■□□□□ 0
SDC2-202ENST00000518385 RBFOX2O43251 390 aaKnown RBP eCLIP15.07■□□□□ 03e-8■■■□□ 17.9
SDC2-202ENST00000518385 PRB1P04280 392 aa15.07■□□□□ 0
SDC2-202ENST00000518385 OR4A8P0C604 315 aa15.07■□□□□ 0
SDC2-202ENST00000518385 CD1BP29016 333 aa15.07■□□□□ 0
SDC2-202ENST00000518385 KIR2DS2P43631 304 aa15.07■□□□□ 0
SDC2-202ENST00000518385 ZNF808Q8N4W9 903 aaPredicted RBP15.07■□□□□ 0
SDC2-202ENST00000518385 ITLN2Q8WWU7 325 aaPredicted RBP15.07■□□□□ 0
SDC2-202ENST00000518385 MS4A10Q96PG2 267 aa15.07■□□□□ 0
SDC2-202ENST00000518385 CLN8Q9UBY8 286 aa15.07■□□□□ 0
SDC2-202ENST00000518385 C9JCJ5 164 aa15.07■□□□□ 0
SDC2-202ENST00000518385 FNDC10F2Z333 226 aa15.07■□□□□ 0
SDC2-202ENST00000518385 C15orf65H3BRN8 121 aa15.07■□□□□ 0
SDC2-202ENST00000518385 SCGB1D1O95968 90 aa15.07■□□□□ 0
SDC2-202ENST00000518385 G6PCP35575 357 aa15.07■□□□□ 0
SDC2-202ENST00000518385 GNB1P62873 340 aa15.07■□□□□ 0
SDC2-202ENST00000518385 GAGE1Q13065 139 aa15.07■□□□□ 0
SDC2-202ENST00000518385 TEX36Q5VZQ5 186 aa15.07■□□□□ 0
SDC2-202ENST00000518385 ZNF843Q8N446 348 aa15.07■□□□□ 0
SDC2-202ENST00000518385 OR13A1Q8NGR1 328 aa15.07■□□□□ 0
SDC2-202ENST00000518385 LINC01560Q8TB33 94 aa15.07■□□□□ 0
SDC2-202ENST00000518385 JPT1Q9UK76 154 aa15.07■□□□□ 0
SDC2-202ENST00000518385 HIVEP3Q5T1R4 2406 aa15.06■□□□□ 0
SDC2-202ENST00000518385 ZG16O60844 167 aa15.06■□□□□ 0
SDC2-202ENST00000518385 S1PR2O95136 353 aa15.06■□□□□ 0
SDC2-202ENST00000518385 STAG3L2P0CL84 134 aa15.06■□□□□ 0
SDC2-202ENST00000518385 STAG3L3P0CL85 134 aa15.06■□□□□ 0
SDC2-202ENST00000518385 TMEM30BQ3MIR4 351 aa15.06■□□□□ 0
SDC2-202ENST00000518385 STUMQ69YW2 141 aa15.06■□□□□ 0
SDC2-202ENST00000518385 DMRTC2Q8IXT2 367 aaPredicted RBP15.06■□□□□ 0
SDC2-202ENST00000518385 OR10G8Q8NGN5 311 aa15.06■□□□□ 0
SDC2-202ENST00000518385 CMTM2Q8TAZ6 248 aa15.06■□□□□ 0
SDC2-202ENST00000518385 C11orf52Q96A22 123 aa15.06■□□□□ 0
SDC2-202ENST00000518385 C15orf62A8K5M9 175 aa15.05■□□□□ -0
SDC2-202ENST00000518385 ITGB1BP1O14713 200 aa15.05■□□□□ -0
SDC2-202ENST00000518385 MT-ND6P03923 174 aa15.05■□□□□ -0
SDC2-202ENST00000518385 AREGP15514 252 aa15.05■□□□□ -0
SDC2-202ENST00000518385 Q0VG73 95 aa15.05■□□□□ -0
SDC2-202ENST00000518385 SPRNQ5BIV9 151 aa15.05■□□□□ -0
SDC2-202ENST00000518385 OR52L2PQ8NGH6 319 aa15.05■□□□□ -0
SDC2-202ENST00000518385 TMEM68Q96MH6 324 aa15.05■□□□□ -0
SDC2-202ENST00000518385 IL36BQ9NZH7 164 aa15.05■□□□□ -0
SDC2-202ENST00000518385 F2RL2O00254 374 aa15.04■□□□□ -0
SDC2-202ENST00000518385 YPEL1O60688 119 aa15.04■□□□□ -0
SDC2-202ENST00000518385 MMP23AO75900 390 aa15.04■□□□□ -0
SDC2-202ENST00000518385 HPRT1P00492 218 aa15.04■□□□□ -0
SDC2-202ENST00000518385 NPPCP23582 126 aa15.04■□□□□ -0
SDC2-202ENST00000518385 CHRNA7P36544 502 aa15.04■□□□□ -0
SDC2-202ENST00000518385 TEX43Q6ZNM6 134 aa15.04■□□□□ -0
SDC2-202ENST00000518385 CORO2AQ92828 525 aa15.04■□□□□ -0
SDC2-202ENST00000518385 UHRF2Q96PU4 802 aa15.04■□□□□ -0
SDC2-202ENST00000518385 YPEL2Q96QA6 119 aa15.04■□□□□ -0
SDC2-202ENST00000518385 TMEM106BQ9NUM4 274 aa15.04■□□□□ -0
SDC2-202ENST00000518385 HCFC1P51610 2035 aa15.04■□□□□ -0
SDC2-202ENST00000518385 RPL30P62888 115 aaKnown RBP15.03■□□□□ -0
SDC2-202ENST00000518385 ZNF816Q0VGE8 651 aaPredicted RBP15.03■□□□□ -0
SDC2-202ENST00000518385 EDDM3AQ14507 147 aa15.03■□□□□ -0
SDC2-202ENST00000518385 TMEM183BQ1AE95 376 aa15.03■□□□□ -0
SDC2-202ENST00000518385 Q8N7P7 452 aa15.03■□□□□ -0
SDC2-202ENST00000518385 SGMS2Q8NHU3 365 aa15.03■□□□□ -0
SDC2-202ENST00000518385 PLPPR2Q96GM1 343 aa15.03■□□□□ -0
SDC2-202ENST00000518385 SNHG12Q9BXW3 62 aa15.03■□□□□ -0
SDC2-202ENST00000518385 POLR3KQ9Y2Y1 108 aaPredicted RBP15.03■□□□□ -0
SDC2-202ENST00000518385 IGHV3OR15-7A0A075B7D8 119 aa15.02■□□□□ -0
SDC2-202ENST00000518385 RAMP3O60896 148 aa15.02■□□□□ -0
SDC2-202ENST00000518385 NDUFB4O95168 129 aa15.02■□□□□ -0
SDC2-202ENST00000518385 CD3EP07766 207 aa15.02■□□□□ -0
SDC2-202ENST00000518385 CGB3P0DN86 165 aa15.02■□□□□ -0
SDC2-202ENST00000518385 CGB7P0DN87 165 aa15.02■□□□□ -0
SDC2-202ENST00000518385 HOXA4Q00056 320 aaPredicted RBP15.02■□□□□ -0
SDC2-202ENST00000518385 EFNB3Q15768 340 aa15.02■□□□□ -0
SDC2-202ENST00000518385 CST9LP1Q5W188 147 aa15.02■□□□□ -0
SDC2-202ENST00000518385 WDR73Q6P4I2 378 aa15.02■□□□□ -0
SDC2-202ENST00000518385 ZNF788Q6ZQV5 615 aa15.02■□□□□ -0
SDC2-202ENST00000518385 UBALD1Q8TB05 177 aa15.02■□□□□ -0
SDC2-202ENST00000518385 MIEN1Q9BRT3 115 aa15.02■□□□□ -0
SDC2-202ENST00000518385 MS4A5Q9H3V2 200 aa15.02■□□□□ -0
SDC2-202ENST00000518385 EPG5Q9HCE0 2579 aa15.02■□□□□ -0
SDC2-202ENST00000518385 TRAV38-1A0A0B4J264 116 aa15.02□□□□□ -0.01
SDC2-202ENST00000518385 MARCH11A6NNE9 402 aa15.02□□□□□ -0.01
SDC2-202ENST00000518385 C17orf98A8MV24 154 aa15.02□□□□□ -0.01
SDC2-202ENST00000518385 SHISA9B4DS77 424 aa15.02□□□□□ -0.01
SDC2-202ENST00000518385 EREGO14944 169 aa15.02□□□□□ -0.01
SDC2-202ENST00000518385 TFF1P04155 84 aa15.02□□□□□ -0.01
SDC2-202ENST00000518385 SNRPCP09234 159 aaKnown RBP15.02□□□□□ -0.01
SDC2-202ENST00000518385 SSTR5P35346 364 aa15.02□□□□□ -0.01
SDC2-202ENST00000518385 ATP5IP56385 69 aaPredicted RBP15.02□□□□□ -0.01
SDC2-202ENST00000518385 RAB31Q13636 194 aa15.02□□□□□ -0.01
SDC2-202ENST00000518385 TEX38Q6PEX7 206 aa15.02□□□□□ -0.01
SDC2-202ENST00000518385 GATAD1Q8WUU5 269 aa15.02□□□□□ -0.01
SDC2-202ENST00000518385 QTRT1Q9BXR0 403 aaKnown RBP15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms