RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 SSX8Q7RTT4 187 aa2.71□□□□□ -1.98
RNU4-60P-201ENST00000517239 TCTE3Q8IZS6 198 aa2.71□□□□□ -1.98
RNU4-60P-201ENST00000517239 OR13C4Q8NGS5 318 aa2.71□□□□□ -1.98
RNU4-60P-201ENST00000517239 H1FXQ92522 213 aaKnown RBP2.71□□□□□ -1.98
RNU4-60P-201ENST00000517239 ISOC1Q96CN7 298 aa2.71□□□□□ -1.98
RNU4-60P-201ENST00000517239 C2orf50Q96LR7 162 aa2.71□□□□□ -1.98
RNU4-60P-201ENST00000517239 TCEAL7Q9BRU2 100 aa2.71□□□□□ -1.98
RNU4-60P-201ENST00000517239 LPAR5Q9H1C0 372 aa2.71□□□□□ -1.98
RNU4-60P-201ENST00000517239 CKLFQ9UBR5 152 aa2.71□□□□□ -1.98
RNU4-60P-201ENST00000517239 HIGD1AQ9Y241 93 aa2.71□□□□□ -1.98
RNU4-60P-201ENST00000517239 MYH7P12883 1935 aa2.71□□□□□ -1.98
RNU4-60P-201ENST00000517239 N4BP2Q86UW6 1770 aaPredicted RBP2.71□□□□□ -1.98
RNU4-60P-201ENST00000517239 WDR97A6NE52 1622 aa2.71□□□□□ -1.98
RNU4-60P-201ENST00000517239 NLRC5Q86WI3 1866 aa2.71□□□□□ -1.98
RNU4-60P-201ENST00000517239 ARHGAP23Q9P227 1491 aa2.71□□□□□ -1.98
RNU4-60P-201ENST00000517239 A0A087WUU8 490 aa2.7□□□□□ -1.98
RNU4-60P-201ENST00000517239 IGHV3-21A0A0B4J1V1 117 aa2.7□□□□□ -1.98
RNU4-60P-201ENST00000517239 IGHV1-3A0A0C4DH29 117 aa2.7□□□□□ -1.98
RNU4-60P-201ENST00000517239 LEUTXA8MZ59 168 aa2.7□□□□□ -1.98
RNU4-60P-201ENST00000517239 K7ERU9 68 aa2.7□□□□□ -1.98
RNU4-60P-201ENST00000517239 OVOL1O14753 267 aa2.7□□□□□ -1.98
RNU4-60P-201ENST00000517239 BCL2L11O43521 198 aa2.7□□□□□ -1.98
RNU4-60P-201ENST00000517239 GNG7O60262 68 aa2.7□□□□□ -1.98
RNU4-60P-201ENST00000517239 IGF2P01344 180 aa2.7□□□□□ -1.98
RNU4-60P-201ENST00000517239 IFNA10P01566 189 aa2.7□□□□□ -1.98
RNU4-60P-201ENST00000517239 IFNGP01579 166 aa2.7□□□□□ -1.98
RNU4-60P-201ENST00000517239 TRGC2P03986 189 aa2.7□□□□□ -1.98
RNU4-60P-201ENST00000517239 CGB3P0DN86 165 aa2.7□□□□□ -1.98
RNU4-60P-201ENST00000517239 CGB7P0DN87 165 aa2.7□□□□□ -1.98
RNU4-60P-201ENST00000517239 PTHLHP12272 177 aa2.7□□□□□ -1.98
RNU4-60P-201ENST00000517239 ZNF25P17030 456 aaPredicted RBP2.7□□□□□ -1.98
RNU4-60P-201ENST00000517239 CXCL12P48061 93 aa2.7□□□□□ -1.98
RNU4-60P-201ENST00000517239 TAS2R30P59541 319 aa2.7□□□□□ -1.98
RNU4-60P-201ENST00000517239 NCS1P62166 190 aa2.7□□□□□ -1.98
RNU4-60P-201ENST00000517239 PSG9Q00887 426 aa2.7□□□□□ -1.98
RNU4-60P-201ENST00000517239 PLCXD2Q0VAA5 305 aa2.7□□□□□ -1.98
RNU4-60P-201ENST00000517239 RTL8BQ17RB0 113 aa2.7□□□□□ -1.98
RNU4-60P-201ENST00000517239 AADACL3Q5VUY0 350 aa2.7□□□□□ -1.98
RNU4-60P-201ENST00000517239 RPL22L1Q6P5R6 122 aaKnown RBP2.7□□□□□ -1.98
RNU4-60P-201ENST00000517239 C4orf22Q6V702 233 aa2.7□□□□□ -1.98
RNU4-60P-201ENST00000517239 LCA10Q71F78 164 aa2.7□□□□□ -1.98
RNU4-60P-201ENST00000517239 OR51T1Q8NGJ9 327 aa2.7□□□□□ -1.98
RNU4-60P-201ENST00000517239 OR4C16Q8NGL9 310 aa2.7□□□□□ -1.98
RNU4-60P-201ENST00000517239 OR5C1Q8NGR4 320 aa2.7□□□□□ -1.98
RNU4-60P-201ENST00000517239 OR4K15Q8NH41 348 aa2.7□□□□□ -1.98
RNU4-60P-201ENST00000517239 LINC01560Q8TB33 94 aa2.7□□□□□ -1.98
RNU4-60P-201ENST00000517239 RPS4Y2Q8TD47 263 aa2.7□□□□□ -1.98
RNU4-60P-201ENST00000517239 ARL11Q969Q4 196 aa2.7□□□□□ -1.98
RNU4-60P-201ENST00000517239 SLC25A46Q96AG3 418 aa2.7□□□□□ -1.98
RNU4-60P-201ENST00000517239 CARD19Q96LW7 228 aa2.7□□□□□ -1.98
RNU4-60P-201ENST00000517239 AP1S3Q96PC3 154 aa2.7□□□□□ -1.98
RNU4-60P-201ENST00000517239 GPX7Q96SL4 187 aaPredicted RBP2.7□□□□□ -1.98
RNU4-60P-201ENST00000517239 SLC25A21Q9BQT8 299 aaPredicted RBP2.7□□□□□ -1.98
RNU4-60P-201ENST00000517239 TM2D3Q9BRN9 247 aa2.7□□□□□ -1.98
RNU4-60P-201ENST00000517239 RTL8AQ9BWD3 113 aa2.7□□□□□ -1.98
RNU4-60P-201ENST00000517239 C1QTNF6Q9BXI9 259 aa2.7□□□□□ -1.98
RNU4-60P-201ENST00000517239 NKX6-2Q9C056 277 aaPredicted RBP2.7□□□□□ -1.98
RNU4-60P-201ENST00000517239 ZNF586Q9NXT0 402 aa2.7□□□□□ -1.98
RNU4-60P-201ENST00000517239 GNG8Q9UK08 70 aa2.7□□□□□ -1.98
RNU4-60P-201ENST00000517239 FUT9Q9Y231 359 aa2.7□□□□□ -1.98
RNU4-60P-201ENST00000517239 AHDC1Q5TGY3 1603 aaPredicted RBP2.7□□□□□ -1.98
RNU4-60P-201ENST00000517239 SIPA1L1O43166 1804 aa2.7□□□□□ -1.98
RNU4-60P-201ENST00000517239 DOCK4Q8N1I0 1966 aa2.69□□□□□ -1.98
RNU4-60P-201ENST00000517239 TRAV5A0A0B4J249 113 aa2.69□□□□□ -1.98
RNU4-60P-201ENST00000517239 TRAV38-1A0A0B4J264 116 aa2.69□□□□□ -1.98
RNU4-60P-201ENST00000517239 DHRS12A0PJE2 317 aa2.69□□□□□ -1.98
RNU4-60P-201ENST00000517239 A6NED7 52 aa2.69□□□□□ -1.98
RNU4-60P-201ENST00000517239 RBFOX2O43251 390 aaKnown RBP eCLIP2.69□□□□□ -1.98
RNU4-60P-201ENST00000517239 DPM2O94777 84 aa2.69□□□□□ -1.98
RNU4-60P-201ENST00000517239 TRGV3P03979 118 aa2.69□□□□□ -1.98
RNU4-60P-201ENST00000517239 SMIM6P0DI80 62 aa2.69□□□□□ -1.98
RNU4-60P-201ENST00000517239 NFYBP25208 207 aa2.69□□□□□ -1.98
RNU4-60P-201ENST00000517239 CSN1S1P47710 185 aa2.69□□□□□ -1.98
RNU4-60P-201ENST00000517239 INSL3P51460 131 aa2.69□□□□□ -1.98
RNU4-60P-201ENST00000517239 HMGA2P52926 109 aa2.69□□□□□ -1.98
RNU4-60P-201ENST00000517239 GNB2P62879 340 aa2.69□□□□□ -1.98
RNU4-60P-201ENST00000517239 KRTAP24-1Q3LI83 254 aa2.69□□□□□ -1.98
RNU4-60P-201ENST00000517239 VMA21Q3ZAQ7 101 aa2.69□□□□□ -1.98
RNU4-60P-201ENST00000517239 AMTNQ6UX39 209 aa2.69□□□□□ -1.98
RNU4-60P-201ENST00000517239 IFT20Q8IY31 132 aa2.69□□□□□ -1.98
RNU4-60P-201ENST00000517239 SLC30A7Q8NEW0 376 aa2.69□□□□□ -1.98
RNU4-60P-201ENST00000517239 TP53RKQ96S44 253 aa2.69□□□□□ -1.98
RNU4-60P-201ENST00000517239 NDFIP1Q9BT67 221 aa2.69□□□□□ -1.98
RNU4-60P-201ENST00000517239 AICDAQ9GZX7 198 aa2.69□□□□□ -1.98
RNU4-60P-201ENST00000517239 FAM60AQ9NP50 221 aa2.69□□□□□ -1.98
RNU4-60P-201ENST00000517239 ZNF355PQ9NSJ1 428 aa2.69□□□□□ -1.98
RNU4-60P-201ENST00000517239 IL36BQ9NZH7 164 aa2.69□□□□□ -1.98
RNU4-60P-201ENST00000517239 ERG28Q9UKR5 140 aa2.69□□□□□ -1.98
RNU4-60P-201ENST00000517239 SNX12Q9UMY4 172 aa2.69□□□□□ -1.98
RNU4-60P-201ENST00000517239 TMEM14AQ9Y6G1 99 aa2.69□□□□□ -1.98
RNU4-60P-201ENST00000517239 FOCADQ5VW36 1801 aa2.69□□□□□ -1.98
RNU4-60P-201ENST00000517239 IBTKQ9P2D0 1353 aaPredicted RBP2.69□□□□□ -1.98
RNU4-60P-201ENST00000517239 UHRF1BP1LA0JNW5 1464 aa2.69□□□□□ -1.98
RNU4-60P-201ENST00000517239 FER1L6Q2WGJ9 1857 aa2.69□□□□□ -1.98
RNU4-60P-201ENST00000517239 DSCAML1Q8TD84 2053 aa2.69□□□□□ -1.98
RNU4-60P-201ENST00000517239 TLCD2A6NGC4 264 aa2.68□□□□□ -1.98
RNU4-60P-201ENST00000517239 GGT3PA6NGU5 568 aa2.68□□□□□ -1.98
RNU4-60P-201ENST00000517239 A8MWP4 228 aa2.68□□□□□ -1.98
RNU4-60P-201ENST00000517239 TAX1BP3O14907 124 aa2.68□□□□□ -1.98
RNU4-60P-201ENST00000517239 OR2T1O43869 369 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms