RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 OR11H2Q8NH07 326 aa11.57□□□□□ -0.56
LMNA-223ENST00000515459 SECTM1Q8WVN6 248 aa11.57□□□□□ -0.56
LMNA-223ENST00000515459 QTRT1Q9BXR0 403 aaKnown RBP11.57□□□□□ -0.56
LMNA-223ENST00000515459 CCL28Q9NRJ3 127 aa11.57□□□□□ -0.56
LMNA-223ENST00000515459 IGHV3OR16-8A0A075B7F1 116 aa11.56□□□□□ -0.56
LMNA-223ENST00000515459 TMEM235A6NFC5 223 aa11.56□□□□□ -0.56
LMNA-223ENST00000515459 ZNF207O43670 478 aaKnown RBP11.56□□□□□ -0.56
LMNA-223ENST00000515459 HPRT1P00492 218 aa11.56□□□□□ -0.56
LMNA-223ENST00000515459 SERPINE2P07093 398 aa11.56□□□□□ -0.56
LMNA-223ENST00000515459 FGF2P09038 288 aa11.56□□□□□ -0.56
LMNA-223ENST00000515459 NQO2P16083 231 aa11.56□□□□□ -0.56
LMNA-223ENST00000515459 GNG2P59768 71 aa11.56□□□□□ -0.56
LMNA-223ENST00000515459 ZNF124Q15973 351 aa11.56□□□□□ -0.56
LMNA-223ENST00000515459 POU2AF1Q16633 256 aa11.56□□□□□ -0.56
LMNA-223ENST00000515459 THOC7Q6I9Y2 204 aaKnown RBP11.56□□□□□ -0.56
LMNA-223ENST00000515459 SLC25A24Q6NUK1 477 aa11.56□□□□□ -0.56
LMNA-223ENST00000515459 PRSS48Q7RTY5 328 aa11.56□□□□□ -0.56
LMNA-223ENST00000515459 HSD17B13Q7Z5P4 300 aaPredicted RBP11.56□□□□□ -0.56
LMNA-223ENST00000515459 ZBTB34Q8NCN2 500 aa11.56□□□□□ -0.56
LMNA-223ENST00000515459 ATP6V0BQ99437 205 aa11.56□□□□□ -0.56
LMNA-223ENST00000515459 CHRDL1Q9BU40 450 aa11.56□□□□□ -0.56
LMNA-223ENST00000515459 C15orf62A8K5M9 175 aa11.55□□□□□ -0.56
LMNA-223ENST00000515459 SULT1C2O00338 296 aa11.55□□□□□ -0.56
LMNA-223ENST00000515459 OR13C7P0DN81 318 aa11.55□□□□□ -0.56
LMNA-223ENST00000515459 ADMP35318 185 aa11.55□□□□□ -0.56
LMNA-223ENST00000515459 CATR1Q13166 79 aa11.55□□□□□ -0.56
LMNA-223ENST00000515459 DMBX1Q8NFW5 382 aa11.55□□□□□ -0.56
LMNA-223ENST00000515459 OR13F1Q8NGS4 319 aa11.55□□□□□ -0.56
LMNA-223ENST00000515459 TMEM140Q9NV12 185 aa11.55□□□□□ -0.56
LMNA-223ENST00000515459 C21orf62Q9NYP8 219 aa11.55□□□□□ -0.56
LMNA-223ENST00000515459 ETV7Q9Y603 341 aa11.55□□□□□ -0.56
LMNA-223ENST00000515459 IGHV3-21A0A0B4J1V1 117 aa11.54□□□□□ -0.56
LMNA-223ENST00000515459 TRDV1A0A1B0GX56 115 aa11.54□□□□□ -0.56
LMNA-223ENST00000515459 SSX5O60225 188 aa11.54□□□□□ -0.56
LMNA-223ENST00000515459 SCGNO76038 276 aa11.54□□□□□ -0.56
LMNA-223ENST00000515459 TRAPPC2P0DI81 140 aa11.54□□□□□ -0.56
LMNA-223ENST00000515459 TRAPPC2BP0DI82 140 aa11.54□□□□□ -0.56
LMNA-223ENST00000515459 FCGR2CP31995 323 aa11.54□□□□□ -0.56
LMNA-223ENST00000515459 ARPC4P59998 168 aa11.54□□□□□ -0.56
LMNA-223ENST00000515459 WT1-ASQ06250 92 aa11.54□□□□□ -0.56
LMNA-223ENST00000515459 NR2C2APQ86WQ0 139 aa11.54□□□□□ -0.56
LMNA-223ENST00000515459 UBAC2Q8NBM4 344 aa11.54□□□□□ -0.56
LMNA-223ENST00000515459 SCARB1Q8WTV0 552 aa11.54□□□□□ -0.56
LMNA-223ENST00000515459 RNF2Q99496 336 aa11.54□□□□□ -0.56
LMNA-223ENST00000515459 SMPXQ9UHP9 88 aa11.54□□□□□ -0.56
LMNA-223ENST00000515459 PCLOQ9Y6V0 5065 aa11.54□□□□□ -0.56
LMNA-223ENST00000515459 TEX50A0A1B0GTY4 177 aa11.53□□□□□ -0.56
LMNA-223ENST00000515459 IGLL5B9A064 214 aa11.53□□□□□ -0.56
LMNA-223ENST00000515459 F8W735 103 aaPredicted RBP11.53□□□□□ -0.56
LMNA-223ENST00000515459 MRPS14O60783 128 aaKnown RBP11.53□□□□□ -0.56
LMNA-223ENST00000515459 TFPI2P48307 235 aa11.53□□□□□ -0.56
LMNA-223ENST00000515459 MFAP2P55001 183 aa11.53□□□□□ -0.56
LMNA-223ENST00000515459 Q56UQ5 140 aa11.53□□□□□ -0.56
LMNA-223ENST00000515459 ZNF773Q6PK81 442 aa11.53□□□□□ -0.56
LMNA-223ENST00000515459 BEST4Q8NFU0 473 aa11.53□□□□□ -0.56
LMNA-223ENST00000515459 RHPN1-AS1Q9BWJ2 59 aa11.53□□□□□ -0.56
LMNA-223ENST00000515459 SLC5A7Q9GZV3 580 aa11.53□□□□□ -0.56
LMNA-223ENST00000515459 NDUFB11Q9NX14 153 aa11.53□□□□□ -0.56
LMNA-223ENST00000515459 APLNQ9ULZ1 77 aa11.53□□□□□ -0.56
LMNA-223ENST00000515459 F11RQ9Y624 299 aaKnown RBP11.53□□□□□ -0.56
LMNA-223ENST00000515459 IGHV7-4-1A0A0J9YVY3 117 aa11.52□□□□□ -0.57
LMNA-223ENST00000515459 SMIM30A4D0T7 59 aa11.52□□□□□ -0.57
LMNA-223ENST00000515459 C11orf94C9JXX5 98 aa11.52□□□□□ -0.57
LMNA-223ENST00000515459 CHEK1O14757 476 aa11.52□□□□□ -0.57
LMNA-223ENST00000515459 DEFB4AO15263 64 aa11.52□□□□□ -0.57
LMNA-223ENST00000515459 CA1P00915 261 aaPredicted RBP11.52□□□□□ -0.57
LMNA-223ENST00000515459 PPYP01298 95 aa11.52□□□□□ -0.57
LMNA-223ENST00000515459 TBCEQ15813 527 aaPredicted RBP11.52□□□□□ -0.57
LMNA-223ENST00000515459 LINC00336Q6ZUF6 198 aa11.52□□□□□ -0.57
LMNA-223ENST00000515459 ZNF367Q7RTV3 350 aa11.52□□□□□ -0.57
LMNA-223ENST00000515459 TMEM116Q8NCL8 245 aa11.52□□□□□ -0.57
LMNA-223ENST00000515459 OR1L8Q8NGR8 309 aa11.52□□□□□ -0.57
LMNA-223ENST00000515459 CMTM3Q96MX0 182 aa11.52□□□□□ -0.57
LMNA-223ENST00000515459 PLEKHA2Q9HB19 425 aa11.52□□□□□ -0.57
LMNA-223ENST00000515459 COMMD9Q9P000 198 aa11.52□□□□□ -0.57
LMNA-223ENST00000515459 VPS13DQ5THJ4 4388 aa11.51□□□□□ -0.57
LMNA-223ENST00000515459 IGKV3-7A0A075B6H7 116 aa11.51□□□□□ -0.57
LMNA-223ENST00000515459 K7EIM0 57 aa11.51□□□□□ -0.57
LMNA-223ENST00000515459 CTSGP08311 255 aa11.51□□□□□ -0.57
LMNA-223ENST00000515459 PTHLHP12272 177 aa11.51□□□□□ -0.57
LMNA-223ENST00000515459 RELQ04864 619 aaPredicted RBP11.51□□□□□ -0.57
LMNA-223ENST00000515459 TMEM187Q14656 261 aa11.51□□□□□ -0.57
LMNA-223ENST00000515459 C22orf42Q6IC83 251 aa11.51□□□□□ -0.57
LMNA-223ENST00000515459 GVQW1Q8N7I0 195 aa11.51□□□□□ -0.57
LMNA-223ENST00000515459 OR51H1Q8NH63 302 aa11.51□□□□□ -0.57
LMNA-223ENST00000515459 LSM10Q969L4 123 aaKnown RBP11.51□□□□□ -0.57
LMNA-223ENST00000515459 HINT2Q9BX68 163 aa11.51□□□□□ -0.57
LMNA-223ENST00000515459 NDUFA4L2Q9NRX3 87 aa11.51□□□□□ -0.57
LMNA-223ENST00000515459 IGHV3-49A0A0A0MS15 119 aa11.5□□□□□ -0.57
LMNA-223ENST00000515459 NOTOA8MTQ0 251 aa11.5□□□□□ -0.57
LMNA-223ENST00000515459 AQP4P55087 323 aa11.5□□□□□ -0.57
LMNA-223ENST00000515459 FXYD4P59646 89 aa11.5□□□□□ -0.57
LMNA-223ENST00000515459 ERVK-16P61578 105 aa11.5□□□□□ -0.57
LMNA-223ENST00000515459 AADACL3Q5VUY0 350 aa11.5□□□□□ -0.57
LMNA-223ENST00000515459 ZNF818PQ6ZRF7 136 aa11.5□□□□□ -0.57
LMNA-223ENST00000515459 HRH4Q9H3N8 390 aa11.5□□□□□ -0.57
LMNA-223ENST00000515459 MARCH11A6NNE9 402 aa11.49□□□□□ -0.57
LMNA-223ENST00000515459 NUPL2O15504 423 aaKnown RBP11.49□□□□□ -0.57
LMNA-223ENST00000515459 XRCC3O43542 346 aa11.49□□□□□ -0.57
LMNA-223ENST00000515459 YIF1AO95070 293 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 117.6 ms