RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 NUBP1P53384 320 aa14.69□□□□□ -0.06
CCHCR1-228ENST00000509552 FOXL1Q12952 345 aa14.69□□□□□ -0.06
CCHCR1-228ENST00000509552 CHODLQ9H9P2 273 aa14.69□□□□□ -0.06
CCHCR1-228ENST00000509552 FKBP11Q9NYL4 201 aa14.69□□□□□ -0.06
CCHCR1-228ENST00000509552 YTHDF2Q9Y5A9 579 aaKnown RBP14.69□□□□□ -0.06
CCHCR1-228ENST00000509552 LINC00312Q9Y6C7 94 aa14.69□□□□□ -0.06
CCHCR1-228ENST00000509552 A0A0U1RQK1 487 aa14.68□□□□□ -0.06
CCHCR1-228ENST00000509552 ZNF320A2RRD8 509 aa14.68□□□□□ -0.06
CCHCR1-228ENST00000509552 PGPEP1LA6NFU8 196 aa14.68□□□□□ -0.06
CCHCR1-228ENST00000509552 DVL1O14640 695 aa14.68□□□□□ -0.06
CCHCR1-228ENST00000509552 C9orf152Q5JTZ5 239 aa14.68□□□□□ -0.06
CCHCR1-228ENST00000509552 SPATA31B1PQ5VZV4 182 aa14.68□□□□□ -0.06
CCHCR1-228ENST00000509552 ZNF114Q8NC26 417 aa14.68□□□□□ -0.06
CCHCR1-228ENST00000509552 UHRF2Q96PU4 802 aa14.68□□□□□ -0.06
CCHCR1-228ENST00000509552 GAL3ST2Q9H3Q3 398 aa14.68□□□□□ -0.06
CCHCR1-228ENST00000509552 K7EM74 188 aa14.67□□□□□ -0.06
CCHCR1-228ENST00000509552 AMBPP02760 352 aa14.67□□□□□ -0.06
CCHCR1-228ENST00000509552 PDLIM4P50479 330 aa14.67□□□□□ -0.06
CCHCR1-228ENST00000509552 ATP5IP56385 69 aaPredicted RBP14.67□□□□□ -0.06
CCHCR1-228ENST00000509552 CCL8P80075 99 aa14.67□□□□□ -0.06
CCHCR1-228ENST00000509552 PRR20EP86478 221 aa14.67□□□□□ -0.06
CCHCR1-228ENST00000509552 PRR20CP86479 221 aa14.67□□□□□ -0.06
CCHCR1-228ENST00000509552 PRR20DP86480 221 aa14.67□□□□□ -0.06
CCHCR1-228ENST00000509552 PRR20BP86481 221 aa14.67□□□□□ -0.06
CCHCR1-228ENST00000509552 PRR20AP86496 221 aa14.67□□□□□ -0.06
CCHCR1-228ENST00000509552 OR4P4Q8NGL7 312 aa14.67□□□□□ -0.06
CCHCR1-228ENST00000509552 RNASEH2CQ8TDP1 164 aaKnown RBP14.67□□□□□ -0.06
CCHCR1-228ENST00000509552 RAI1Q7Z5J4 1906 aaPredicted RBP14.67□□□□□ -0.06
CCHCR1-228ENST00000509552 KLK10O43240 276 aa14.67□□□□□ -0.06
CCHCR1-228ENST00000509552 IGKV1-16P04430 117 aa14.67□□□□□ -0.06
CCHCR1-228ENST00000509552 GAMTQ14353 236 aa14.67□□□□□ -0.06
CCHCR1-228ENST00000509552 TMEM144Q7Z5S9 345 aa14.67□□□□□ -0.06
CCHCR1-228ENST00000509552 OR5R1Q8NH85 324 aa14.67□□□□□ -0.06
CCHCR1-228ENST00000509552 LRFN3Q9BTN0 628 aa14.67□□□□□ -0.06
CCHCR1-228ENST00000509552 TRBV20OR9-2A0A075B6H5 130 aa14.66□□□□□ -0.06
CCHCR1-228ENST00000509552 SGMS2Q8NHU3 365 aa14.66□□□□□ -0.06
CCHCR1-228ENST00000509552 DCAF16Q9NXF7 216 aa14.66□□□□□ -0.06
CCHCR1-228ENST00000509552 ICE1Q9Y2F5 2266 aa14.66□□□□□ -0.06
CCHCR1-228ENST00000509552 RPL31P62899 125 aaKnown RBP14.66□□□□□ -0.06
CCHCR1-228ENST00000509552 SNRNP40Q96DI7 357 aaKnown RBP14.66□□□□□ -0.06
CCHCR1-228ENST00000509552 BET1LQ9NYM9 111 aa14.66□□□□□ -0.06
CCHCR1-228ENST00000509552 SLC25A10Q9UBX3 287 aaPredicted RBP14.66□□□□□ -0.06
CCHCR1-228ENST00000509552 TRAPPC1Q9Y5R8 145 aa14.66□□□□□ -0.06
CCHCR1-228ENST00000509552 TEX50A0A1B0GTY4 177 aa14.65□□□□□ -0.06
CCHCR1-228ENST00000509552 SRRM4A7MD48 611 aaKnown RBP14.65□□□□□ -0.06
CCHCR1-228ENST00000509552 C16orf97H3BN30 126 aa14.65□□□□□ -0.06
CCHCR1-228ENST00000509552 GATCO43716 136 aaKnown RBP14.65□□□□□ -0.06
CCHCR1-228ENST00000509552 FOXH1O75593 365 aa14.65□□□□□ -0.06
CCHCR1-228ENST00000509552 CNN1P51911 297 aaKnown RBP14.65□□□□□ -0.06
CCHCR1-228ENST00000509552 DEFA6Q01524 100 aa14.65□□□□□ -0.06
CCHCR1-228ENST00000509552 MEF2CQ06413 473 aaPredicted RBP14.65□□□□□ -0.06
CCHCR1-228ENST00000509552 JOSD1Q15040 202 aaPredicted RBP14.65□□□□□ -0.06
CCHCR1-228ENST00000509552 LURAP1LQ8IV03 231 aa14.65□□□□□ -0.06
CCHCR1-228ENST00000509552 OR10G8Q8NGN5 311 aa14.65□□□□□ -0.06
CCHCR1-228ENST00000509552 OR5B3Q8NH48 314 aa14.65□□□□□ -0.06
CCHCR1-228ENST00000509552 OCC1Q8TAD7 63 aa14.65□□□□□ -0.06
CCHCR1-228ENST00000509552 SLC45A2Q9UMX9 530 aa14.65□□□□□ -0.06
CCHCR1-228ENST00000509552 DYSFO75923 2080 aa14.65□□□□□ -0.06
CCHCR1-228ENST00000509552 PLCE1Q9P212 2302 aa14.65□□□□□ -0.06
CCHCR1-228ENST00000509552 APOA2P02652 100 aa14.65□□□□□ -0.06
CCHCR1-228ENST00000509552 LINC00869P0C866 280 aa14.65□□□□□ -0.06
CCHCR1-228ENST00000509552 CCKARP32238 428 aa14.65□□□□□ -0.06
CCHCR1-228ENST00000509552 PKIAP61925 76 aa14.65□□□□□ -0.06
CCHCR1-228ENST00000509552 WFDC8Q8IUA0 241 aa14.65□□□□□ -0.06
CCHCR1-228ENST00000509552 OSR1Q8TAX0 266 aaPredicted RBP14.65□□□□□ -0.06
CCHCR1-228ENST00000509552 RND1Q92730 232 aa14.65□□□□□ -0.06
CCHCR1-228ENST00000509552 C17orf100A8MU93 164 aa14.64□□□□□ -0.07
CCHCR1-228ENST00000509552 TSTD3H0UI37 97 aa14.64□□□□□ -0.07
CCHCR1-228ENST00000509552 PRRG2O14669 202 aa14.64□□□□□ -0.07
CCHCR1-228ENST00000509552 ACTL6BO94805 426 aa14.64□□□□□ -0.07
CCHCR1-228ENST00000509552 SAA1P0DJI8 122 aaPredicted RBP14.64□□□□□ -0.07
CCHCR1-228ENST00000509552 HNF1AP20823 631 aa14.64□□□□□ -0.07
CCHCR1-228ENST00000509552 C2orf83Q53S99 150 aa14.64□□□□□ -0.07
CCHCR1-228ENST00000509552 ZNF833PQ6ZTB9 187 aa14.64□□□□□ -0.07
CCHCR1-228ENST00000509552 C11orf52Q96A22 123 aa14.64□□□□□ -0.07
CCHCR1-228ENST00000509552 SLC35E1Q96K37 410 aa14.64□□□□□ -0.07
CCHCR1-228ENST00000509552 NABP2Q9BQ15 211 aa14.64□□□□□ -0.07
CCHCR1-228ENST00000509552 ELOVL5Q9NYP7 299 aa14.64□□□□□ -0.07
CCHCR1-228ENST00000509552 ZNRD1Q9P1U0 126 aa14.64□□□□□ -0.07
CCHCR1-228ENST00000509552 ARL2-SNX15V9GYD0 113 aa14.64□□□□□ -0.07
CCHCR1-228ENST00000509552 OR4A8P0C604 315 aa14.64□□□□□ -0.07
CCHCR1-228ENST00000509552 RPL15P61313 204 aaKnown RBP14.64□□□□□ -0.07
CCHCR1-228ENST00000509552 TEX38Q6PEX7 206 aa14.64□□□□□ -0.07
CCHCR1-228ENST00000509552 MIR17HGQ75NE6 70 aa14.64□□□□□ -0.07
CCHCR1-228ENST00000509552 TMEM18Q96B42 140 aa14.64□□□□□ -0.07
CCHCR1-228ENST00000509552 TMEM167BQ9NRX6 74 aa14.64□□□□□ -0.07
CCHCR1-228ENST00000509552 YLPM1P49750 1951 aaKnown RBP14.63□□□□□ -0.07
CCHCR1-228ENST00000509552 AREGP15514 252 aa14.63□□□□□ -0.07
CCHCR1-228ENST00000509552 ADIPOQQ15848 244 aa14.63□□□□□ -0.07
CCHCR1-228ENST00000509552 OR1L8Q8NGR8 309 aa14.63□□□□□ -0.07
CCHCR1-228ENST00000509552 ZNF714Q96N38 554 aa14.63□□□□□ -0.07
CCHCR1-228ENST00000509552 RP1L1Q8IWN7 2480 aaPredicted RBP14.63□□□□□ -0.07
CCHCR1-228ENST00000509552 A0A0G2JNJ9 132 aa14.63□□□□□ -0.07
CCHCR1-228ENST00000509552 C9JCJ5 164 aa14.63□□□□□ -0.07
CCHCR1-228ENST00000509552 MKRN2OSH3BPM6 223 aa14.63□□□□□ -0.07
CCHCR1-228ENST00000509552 PSG5Q15238 335 aa14.63□□□□□ -0.07
CCHCR1-228ENST00000509552 FAM122AQ96E09 287 aa14.63□□□□□ -0.07
CCHCR1-228ENST00000509552 HARBI1Q96MB7 349 aa14.63□□□□□ -0.07
CCHCR1-228ENST00000509552 TECRQ9NZ01 308 aaKnown RBP14.63□□□□□ -0.07
CCHCR1-228ENST00000509552 Q9UFV3 132 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms