RNA–Protein interactions for RNA: ENST00000509277.5

LIMCH1-209, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2 BASIC

Gene LIMCH1, Length 3,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-209ENST00000509277 HLA-GP17693 338 aa7.21□□□□□ -1.26
LIMCH1-209ENST00000509277 PSMB3P49720 205 aa7.21□□□□□ -1.26
LIMCH1-209ENST00000509277 BAXQ07812 192 aa7.21□□□□□ -1.26
LIMCH1-209ENST00000509277 TMEM42Q69YG0 159 aa7.21□□□□□ -1.26
LIMCH1-209ENST00000509277 SPSB3Q6PJ21 355 aa7.21□□□□□ -1.26
LIMCH1-209ENST00000509277 FAM216BQ8N7L0 139 aa7.21□□□□□ -1.26
LIMCH1-209ENST00000509277 CCL19Q99731 98 aa7.21□□□□□ -1.26
LIMCH1-209ENST00000509277 MIEN1Q9BRT3 115 aa7.21□□□□□ -1.26
LIMCH1-209ENST00000509277 DCTN5Q9BTE1 182 aa7.21□□□□□ -1.26
LIMCH1-209ENST00000509277 ACTR3CQ9C0K3 210 aaPredicted RBP7.21□□□□□ -1.26
LIMCH1-209ENST00000509277 RAB1BQ9H0U4 201 aa7.21□□□□□ -1.26
LIMCH1-209ENST00000509277 NAA60Q9H7X0 242 aa7.21□□□□□ -1.26
LIMCH1-209ENST00000509277 Q9N2K0 584 aa7.21□□□□□ -1.26
LIMCH1-209ENST00000509277 RNF7Q9UBF6 113 aa7.21□□□□□ -1.26
LIMCH1-209ENST00000509277 CDS2O95674 445 aa7.21□□□□□ -1.26
LIMCH1-209ENST00000509277 RBX1P62877 108 aa7.21□□□□□ -1.26
LIMCH1-209ENST00000509277 RPL24P83731 157 aaKnown RBP7.21□□□□□ -1.26
LIMCH1-209ENST00000509277 MAPK1IP1LQ8NDC0 245 aa7.21□□□□□ -1.26
LIMCH1-209ENST00000509277 OR10V1Q8NGI7 309 aa7.21□□□□□ -1.26
LIMCH1-209ENST00000509277 MEGF9Q9H1U4 602 aa7.21□□□□□ -1.26
LIMCH1-209ENST00000509277 LAMTOR2Q9Y2Q5 125 aa7.21□□□□□ -1.26
LIMCH1-209ENST00000509277 UBR5O95071 2799 aaPredicted RBP7.21□□□□□ -1.26
LIMCH1-209ENST00000509277 IGHV3-43A0A0B4J1X8 118 aa7.2□□□□□ -1.26
LIMCH1-209ENST00000509277 HAND1O96004 215 aa7.2□□□□□ -1.26
LIMCH1-209ENST00000509277 HSPB1P04792 205 aaKnown RBP7.2□□□□□ -1.26
LIMCH1-209ENST00000509277 IGHV3-43DP0DP04 118 aa7.2□□□□□ -1.26
LIMCH1-209ENST00000509277 ATP5J2P56134 94 aa7.2□□□□□ -1.26
LIMCH1-209ENST00000509277 RBM11P57052 281 aaKnown RBP7.2□□□□□ -1.26
LIMCH1-209ENST00000509277 MZT1Q08AG7 82 aa7.2□□□□□ -1.26
LIMCH1-209ENST00000509277 SMIM21Q3B7S5 101 aa7.2□□□□□ -1.26
LIMCH1-209ENST00000509277 MRPL54Q6P161 138 aaKnown RBP7.2□□□□□ -1.26
LIMCH1-209ENST00000509277 FAM169BQ8N8A8 192 aa7.2□□□□□ -1.26
LIMCH1-209ENST00000509277 NUP37Q8NFH4 326 aa7.2□□□□□ -1.26
LIMCH1-209ENST00000509277 BOD1Q96IK1 185 aa7.2□□□□□ -1.26
LIMCH1-209ENST00000509277 ZNF430Q9H8G1 570 aaPredicted RBP7.2□□□□□ -1.26
LIMCH1-209ENST00000509277 PLEKHF2Q9H8W4 249 aa7.2□□□□□ -1.26
LIMCH1-209ENST00000509277 BET1LQ9NYM9 111 aa7.2□□□□□ -1.26
LIMCH1-209ENST00000509277 IL19Q9UHD0 177 aa7.2□□□□□ -1.26
LIMCH1-209ENST00000509277 NAT8BQ9UHF3 227 aa7.2□□□□□ -1.26
LIMCH1-209ENST00000509277 VAX2Q9UIW0 290 aa7.2□□□□□ -1.26
LIMCH1-209ENST00000509277 MDFIC2A0A1B0GVS7 189 aa7.2□□□□□ -1.26
LIMCH1-209ENST00000509277 CLEC18AA5D8T8 446 aa7.2□□□□□ -1.26
LIMCH1-209ENST00000509277 OR2H2O95918 312 aa7.2□□□□□ -1.26
LIMCH1-209ENST00000509277 PRRX1P54821 245 aa7.2□□□□□ -1.26
LIMCH1-209ENST00000509277 IL24Q13007 206 aa7.2□□□□□ -1.26
LIMCH1-209ENST00000509277 MSMO1Q15800 293 aa7.2□□□□□ -1.26
LIMCH1-209ENST00000509277 CLEC18CQ8NCF0 446 aa7.2□□□□□ -1.26
LIMCH1-209ENST00000509277 OR2D3Q8NGH3 330 aa7.2□□□□□ -1.26
LIMCH1-209ENST00000509277 BORCS7Q96B45 105 aa7.2□□□□□ -1.26
LIMCH1-209ENST00000509277 A0A1W2PRD5 423 aa7.2□□□□□ -1.26
LIMCH1-209ENST00000509277 A0A1W2PRF3 423 aa7.2□□□□□ -1.26
LIMCH1-209ENST00000509277 A0A1W2PRM7 423 aa7.2□□□□□ -1.26
LIMCH1-209ENST00000509277 TMEM14DPA8MWL7 114 aa7.2□□□□□ -1.26
LIMCH1-209ENST00000509277 J3QW42 95 aa7.2□□□□□ -1.26
LIMCH1-209ENST00000509277 AADACP22760 399 aa7.2□□□□□ -1.26
LIMCH1-209ENST00000509277 CD81P60033 236 aa7.2□□□□□ -1.26
LIMCH1-209ENST00000509277 ACOT6Q3I5F7 207 aaPredicted RBP7.2□□□□□ -1.26
LIMCH1-209ENST00000509277 FBLN7Q53RD9 439 aa7.2□□□□□ -1.26
LIMCH1-209ENST00000509277 ZNF841Q6ZN19 808 aa7.2□□□□□ -1.26
LIMCH1-209ENST00000509277 GCSAMQ8N6F7 178 aa7.2□□□□□ -1.26
LIMCH1-209ENST00000509277 ZNF525Q8N782 197 aa7.2□□□□□ -1.26
LIMCH1-209ENST00000509277 RNF2Q99496 336 aa7.2□□□□□ -1.26
LIMCH1-209ENST00000509277 IGLV3-9A0A075B6K5 115 aa7.19□□□□□ -1.26
LIMCH1-209ENST00000509277 SNURFLB1AK76 121 aa7.19□□□□□ -1.26
LIMCH1-209ENST00000509277 ZNF253O75346 499 aa7.19□□□□□ -1.26
LIMCH1-209ENST00000509277 DLX1P56177 255 aa7.19□□□□□ -1.26
LIMCH1-209ENST00000509277 KRTAP10-9P60411 292 aa7.19□□□□□ -1.26
LIMCH1-209ENST00000509277 IL13RA2Q14627 380 aa7.19□□□□□ -1.26
LIMCH1-209ENST00000509277 NUDT10Q8NFP7 164 aa7.19□□□□□ -1.26
LIMCH1-209ENST00000509277 MRGPRDQ8TDS7 321 aa7.19□□□□□ -1.26
LIMCH1-209ENST00000509277 GNPNAT1Q96EK6 184 aaPredicted RBP7.19□□□□□ -1.26
LIMCH1-209ENST00000509277 PMCHL2Q9BQD1 86 aa7.19□□□□□ -1.26
LIMCH1-209ENST00000509277 DERL1Q9BUN8 251 aa7.19□□□□□ -1.26
LIMCH1-209ENST00000509277 SDF2L1Q9HCN8 221 aa7.19□□□□□ -1.26
LIMCH1-209ENST00000509277 TMEM106BQ9NUM4 274 aa7.19□□□□□ -1.26
LIMCH1-209ENST00000509277 ANXA10Q9UJ72 324 aa7.19□□□□□ -1.26
LIMCH1-209ENST00000509277 MYO9AB2RTY4 2548 aa7.19□□□□□ -1.26
LIMCH1-209ENST00000509277 NDUFB4O95168 129 aa7.19□□□□□ -1.26
LIMCH1-209ENST00000509277 IL3RAP26951 378 aa7.19□□□□□ -1.26
LIMCH1-209ENST00000509277 PRDX2P32119 198 aa7.19□□□□□ -1.26
LIMCH1-209ENST00000509277 FGF12P61328 243 aa7.19□□□□□ -1.26
LIMCH1-209ENST00000509277 C16orf54Q6UWD8 224 aa7.19□□□□□ -1.26
LIMCH1-209ENST00000509277 LIAT1Q6ZQX7 453 aa7.19□□□□□ -1.26
LIMCH1-209ENST00000509277 C1orf147Q96MC9 270 aaPredicted RBP7.19□□□□□ -1.26
LIMCH1-209ENST00000509277 CLUHP3Q96NS8 147 aa7.19□□□□□ -1.26
LIMCH1-209ENST00000509277 NECAP2Q9NVZ3 263 aa7.19□□□□□ -1.26
LIMCH1-209ENST00000509277 NAT8Q9UHE5 227 aa7.19□□□□□ -1.26
LIMCH1-209ENST00000509277 WIPI2Q9Y4P8 454 aa7.19□□□□□ -1.26
LIMCH1-209ENST00000509277 PPIAL4EA0A075B759 164 aa7.18□□□□□ -1.26
LIMCH1-209ENST00000509277 PPIAL4DF5H284 164 aa7.18□□□□□ -1.26
LIMCH1-209ENST00000509277 PDCD6O75340 191 aa7.18□□□□□ -1.26
LIMCH1-209ENST00000509277 HRASP01112 189 aa7.18□□□□□ -1.26
LIMCH1-209ENST00000509277 PPIAL4FP0DN26 164 aa7.18□□□□□ -1.26
LIMCH1-209ENST00000509277 ADMP35318 185 aa7.18□□□□□ -1.26
LIMCH1-209ENST00000509277 ARL6IP1Q15041 203 aa7.18□□□□□ -1.26
LIMCH1-209ENST00000509277 FAM90A2PQ658T7 463 aa7.18□□□□□ -1.26
LIMCH1-209ENST00000509277 CRIP3Q6Q6R5 217 aa7.18□□□□□ -1.26
LIMCH1-209ENST00000509277 FAM90A1Q86YD7 464 aa7.18□□□□□ -1.26
LIMCH1-209ENST00000509277 RAB37Q96AX2 223 aa7.18□□□□□ -1.26
LIMCH1-209ENST00000509277 Q96M66 194 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms