RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 IGHV1-3A0A0C4DH29 117 aa8.31□□□□□ -1.08
HDAC3-214ENST00000495485 ANKRD34BA5PLL1 514 aa8.31□□□□□ -1.08
HDAC3-214ENST00000495485 BTBD17A6NE02 478 aa8.31□□□□□ -1.08
HDAC3-214ENST00000495485 C22orf46C9J442 243 aa8.31□□□□□ -1.08
HDAC3-214ENST00000495485 CD5LO43866 347 aa8.31□□□□□ -1.08
HDAC3-214ENST00000495485 ACTL6BO94805 426 aa8.31□□□□□ -1.08
HDAC3-214ENST00000495485 TSPAN15O95858 294 aa8.31□□□□□ -1.08
HDAC3-214ENST00000495485 HBE1P02100 147 aa8.31□□□□□ -1.08
HDAC3-214ENST00000495485 IL6RP08887 468 aaPredicted RBP8.31□□□□□ -1.08
HDAC3-214ENST00000495485 ATP6V0CP27449 155 aa8.31□□□□□ -1.08
HDAC3-214ENST00000495485 CD1BP29016 333 aa8.31□□□□□ -1.08
HDAC3-214ENST00000495485 SNCAP37840 140 aa8.31□□□□□ -1.08
HDAC3-214ENST00000495485 RPL8P62917 257 aaKnown RBP8.31□□□□□ -1.08
HDAC3-214ENST00000495485 PRCDQ00LT1 54 aa8.31□□□□□ -1.08
HDAC3-214ENST00000495485 LRRC75BQ2VPJ9 315 aa8.31□□□□□ -1.08
HDAC3-214ENST00000495485 CYB5R2Q6BCY4 276 aa8.31□□□□□ -1.08
HDAC3-214ENST00000495485 C1orf229Q6ZS94 237 aaPredicted RBP8.31□□□□□ -1.08
HDAC3-214ENST00000495485 TMEM167AQ8TBQ9 72 aa8.31□□□□□ -1.08
HDAC3-214ENST00000495485 PCNPQ8WW12 178 aaKnown RBP8.31□□□□□ -1.08
HDAC3-214ENST00000495485 CXorf58Q96LI9 332 aa8.31□□□□□ -1.08
HDAC3-214ENST00000495485 PBDC1Q9BVG4 233 aa8.31□□□□□ -1.08
HDAC3-214ENST00000495485 LPAR2Q9HBW0 351 aa8.31□□□□□ -1.08
HDAC3-214ENST00000495485 KCNIP2Q9NS61 270 aa8.31□□□□□ -1.08
HDAC3-214ENST00000495485 POLR3KQ9Y2Y1 108 aaPredicted RBP8.31□□□□□ -1.08
HDAC3-214ENST00000495485 IGHV2-70DA0A0C4DH43 119 aa8.3□□□□□ -1.08
HDAC3-214ENST00000495485 MFSD2BA6NFX1 497 aa8.3□□□□□ -1.08
HDAC3-214ENST00000495485 IFNA4P05014 189 aa8.3□□□□□ -1.08
HDAC3-214ENST00000495485 SAA1P0DJI8 122 aaPredicted RBP8.3□□□□□ -1.08
HDAC3-214ENST00000495485 COX7A1P24310 79 aa8.3□□□□□ -1.08
HDAC3-214ENST00000495485 REG1BP48304 166 aa8.3□□□□□ -1.08
HDAC3-214ENST00000495485 COMPP49747 757 aaPredicted RBP8.3□□□□□ -1.08
HDAC3-214ENST00000495485 DLK1P80370 383 aa8.3□□□□□ -1.08
HDAC3-214ENST00000495485 PJVKQ0ZLH3 352 aa8.3□□□□□ -1.08
HDAC3-214ENST00000495485 RAB31Q13636 194 aa8.3□□□□□ -1.08
HDAC3-214ENST00000495485 PXDC1Q5TGL8 231 aa8.3□□□□□ -1.08
HDAC3-214ENST00000495485 ETV3LQ6ZN32 361 aa8.3□□□□□ -1.08
HDAC3-214ENST00000495485 TMEM182Q6ZP80 229 aaPredicted RBP8.3□□□□□ -1.08
HDAC3-214ENST00000495485 Q6ZRG5 221 aa8.3□□□□□ -1.08
HDAC3-214ENST00000495485 THNSL2Q86YJ6 484 aa8.3□□□□□ -1.08
HDAC3-214ENST00000495485 MMD2Q8IY49 270 aa8.3□□□□□ -1.08
HDAC3-214ENST00000495485 VKORC1L1Q8N0U8 176 aa8.3□□□□□ -1.08
HDAC3-214ENST00000495485 LINC01356Q8N9X3 169 aa8.3□□□□□ -1.08
HDAC3-214ENST00000495485 CLDND2Q8NHS1 167 aa8.3□□□□□ -1.08
HDAC3-214ENST00000495485 ZDHHC16Q969W1 377 aa8.3□□□□□ -1.08
HDAC3-214ENST00000495485 BSCL2Q96G97 398 aaPredicted RBP8.3□□□□□ -1.08
HDAC3-214ENST00000495485 WDR61Q9GZS3 305 aaKnown RBP8.3□□□□□ -1.08
HDAC3-214ENST00000495485 TBL2Q9Y4P3 447 aaKnown RBP8.3□□□□□ -1.08
HDAC3-214ENST00000495485 ANK3Q12955 4377 aaKnown RBP8.29□□□□□ -1.08
HDAC3-214ENST00000495485 TRAV20A0A0B4J274 112 aa8.29□□□□□ -1.08
HDAC3-214ENST00000495485 IGHV4-61A0A0C4DH41 118 aa8.29□□□□□ -1.08
HDAC3-214ENST00000495485 FNDC10F2Z333 226 aa8.29□□□□□ -1.08
HDAC3-214ENST00000495485 INS-IGF2F8WCM5 200 aa8.29□□□□□ -1.08
HDAC3-214ENST00000495485 TOX4O94842 621 aa8.29□□□□□ -1.08
HDAC3-214ENST00000495485 IGKV1-16P04430 117 aa8.29□□□□□ -1.08
HDAC3-214ENST00000495485 NPY1RP25929 384 aa8.29□□□□□ -1.08
HDAC3-214ENST00000495485 VDAC2P45880 294 aaPredicted RBP8.29□□□□□ -1.08
HDAC3-214ENST00000495485 DVL1P1P54792 670 aaPredicted RBP8.29□□□□□ -1.08
HDAC3-214ENST00000495485 LMO4P61968 165 aa8.29□□□□□ -1.08
HDAC3-214ENST00000495485 ZNF616Q08AN1 781 aa8.29□□□□□ -1.08
HDAC3-214ENST00000495485 UTF1Q5T230 341 aa8.29□□□□□ -1.08
HDAC3-214ENST00000495485 TPTE2P1Q5T6R2 138 aa8.29□□□□□ -1.08
HDAC3-214ENST00000495485 VMO1Q7Z5L0 202 aa8.29□□□□□ -1.08
HDAC3-214ENST00000495485 SLC24A4Q8NFF2 622 aa8.29□□□□□ -1.08
HDAC3-214ENST00000495485 OR4P4Q8NGL7 312 aa8.29□□□□□ -1.08
HDAC3-214ENST00000495485 TAF15Q92804 592 aaKnown RBP eCLIP8.29□□□□□ -1.08
HDAC3-214ENST00000495485 HINT2Q9BX68 163 aa8.29□□□□□ -1.08
HDAC3-214ENST00000495485 HRH4Q9H3N8 390 aa8.29□□□□□ -1.08
HDAC3-214ENST00000495485 KIAA1456Q9P272 454 aa8.29□□□□□ -1.08
HDAC3-214ENST00000495485 TEX50A0A1B0GTY4 177 aa8.28□□□□□ -1.08
HDAC3-214ENST00000495485 LY6LH3BQJ8 138 aa8.28□□□□□ -1.08
HDAC3-214ENST00000495485 J3QLI3 93 aa8.28□□□□□ -1.08
HDAC3-214ENST00000495485 SNRNP70P08621 437 aaKnown RBP8.28□□□□□ -1.08
HDAC3-214ENST00000495485 H2AFB1P0C5Y9 115 aa8.28□□□□□ -1.08
HDAC3-214ENST00000495485 ZP3P21754 424 aa8.28□□□□□ -1.08
HDAC3-214ENST00000495485 FGF7P21781 194 aa8.28□□□□□ -1.08
HDAC3-214ENST00000495485 BRS3P32247 399 aa8.28□□□□□ -1.08
HDAC3-214ENST00000495485 UBE2E1P51965 193 aa8.28□□□□□ -1.08
HDAC3-214ENST00000495485 LCN2P80188 198 aa8.28□□□□□ -1.08
HDAC3-214ENST00000495485 SCGB2A2Q13296 93 aa8.28□□□□□ -1.08
HDAC3-214ENST00000495485 PEA15Q15121 130 aa8.28□□□□□ -1.08
HDAC3-214ENST00000495485 VWC2Q2TAL6 325 aa8.28□□□□□ -1.08
HDAC3-214ENST00000495485 C2orf83Q53S99 150 aa8.28□□□□□ -1.08
HDAC3-214ENST00000495485 Q8N7P7 452 aa8.28□□□□□ -1.08
HDAC3-214ENST00000495485 FAM213BQ8TBF2 198 aa8.28□□□□□ -1.08
HDAC3-214ENST00000495485 RBMXL1Q96E39 390 aaKnown RBP8.28□□□□□ -1.08
HDAC3-214ENST00000495485 OR4C12Q96R67 309 aa8.28□□□□□ -1.08
HDAC3-214ENST00000495485 SMDT1Q9H4I9 107 aa8.28□□□□□ -1.08
HDAC3-214ENST00000495485 NPVFQ9HCQ7 196 aa8.28□□□□□ -1.08
HDAC3-214ENST00000495485 ZNRD1Q9P1U0 126 aa8.28□□□□□ -1.08
HDAC3-214ENST00000495485 FN1P02751 2386 aaKnown RBP8.28□□□□□ -1.08
HDAC3-214ENST00000495485 NF1P21359 2839 aa8.28□□□□□ -1.08
HDAC3-214ENST00000495485 ARHGAP32A7KAX9 2087 aa8.28□□□□□ -1.08
HDAC3-214ENST00000495485 TRAV3A0A0B4J244 114 aa8.27□□□□□ -1.09
HDAC3-214ENST00000495485 UBE2L5PA0A1B0GUS4 154 aa8.27□□□□□ -1.09
HDAC3-214ENST00000495485 SRRM4A7MD48 611 aaKnown RBP8.27□□□□□ -1.09
HDAC3-214ENST00000495485 C15orf62A8K5M9 175 aa8.27□□□□□ -1.09
HDAC3-214ENST00000495485 ODF3BA8MYP8 253 aa8.27□□□□□ -1.09
HDAC3-214ENST00000495485 MSMBP08118 114 aa8.27□□□□□ -1.09
HDAC3-214ENST00000495485 IGHV4-31P0DP07 118 aa8.27□□□□□ -1.09
HDAC3-214ENST00000495485 HNF1AP20823 631 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms