RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 SLC22A1O15245 554 aa1.21□□□□□ -2.22
LMNB1-207ENST00000494185 PLA2G10O15496 165 aa1.21□□□□□ -2.22
LMNB1-207ENST00000494185 DLEU1O43261 78 aa1.21□□□□□ -2.22
LMNB1-207ENST00000494185 PDE6DO43924 150 aa1.21□□□□□ -2.22
LMNB1-207ENST00000494185 NPYP01303 97 aa1.21□□□□□ -2.22
LMNB1-207ENST00000494185 IFNA21P01568 189 aa1.21□□□□□ -2.22
LMNB1-207ENST00000494185 SERPINE1P05121 402 aa1.21□□□□□ -2.22
LMNB1-207ENST00000494185 HTR1AP08908 422 aa1.21□□□□□ -2.22
LMNB1-207ENST00000494185 GZMBP10144 247 aa1.21□□□□□ -2.22
LMNB1-207ENST00000494185 CYBAP13498 195 aa1.21□□□□□ -2.22
LMNB1-207ENST00000494185 ZNF22P17026 224 aaPredicted RBP1.21□□□□□ -2.22
LMNB1-207ENST00000494185 BLVRBP30043 206 aaPredicted RBP1.21□□□□□ -2.22
LMNB1-207ENST00000494185 RPL5P46777 297 aaKnown RBP1.21□□□□□ -2.22
LMNB1-207ENST00000494185 RAB13P51153 203 aa1.21□□□□□ -2.22
LMNB1-207ENST00000494185 FXYD7P58549 80 aa1.21□□□□□ -2.22
LMNB1-207ENST00000494185 TAS2R30P59541 319 aa1.21□□□□□ -2.22
LMNB1-207ENST00000494185 GNG2P59768 71 aa1.21□□□□□ -2.22
LMNB1-207ENST00000494185 DNAJB13P59910 316 aa1.21□□□□□ -2.22
LMNB1-207ENST00000494185 RPL19P84098 196 aaKnown RBP1.21□□□□□ -2.22
LMNB1-207ENST00000494185 MEF2BQ02080 365 aaPredicted RBP1.21□□□□□ -2.22
LMNB1-207ENST00000494185 AKR1C1Q04828 323 aa1.21□□□□□ -2.22
LMNB1-207ENST00000494185 GRK1Q15835 563 aa1.21□□□□□ -2.22
LMNB1-207ENST00000494185 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.21□□□□□ -2.22
LMNB1-207ENST00000494185 RPL13AP3Q6NVV1 102 aa1.21□□□□□ -2.22
LMNB1-207ENST00000494185 WDR59Q6PJI9 974 aa1.21□□□□□ -2.22
LMNB1-207ENST00000494185 SPATA12Q7Z6I5 190 aa1.21□□□□□ -2.22
LMNB1-207ENST00000494185 ZNF283Q8N7M2 679 aa1.21□□□□□ -2.22
LMNB1-207ENST00000494185 CNEP1R1Q8N9A8 125 aa1.21□□□□□ -2.22
LMNB1-207ENST00000494185 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.21□□□□□ -2.22
LMNB1-207ENST00000494185 OR8J3Q8NGG0 315 aa1.21□□□□□ -2.22
LMNB1-207ENST00000494185 OR8B12Q8NGG6 310 aa1.21□□□□□ -2.22
LMNB1-207ENST00000494185 OR52L1Q8NGH7 329 aa1.21□□□□□ -2.22
LMNB1-207ENST00000494185 OR13C8Q8NGS7 320 aa1.21□□□□□ -2.22
LMNB1-207ENST00000494185 OR13D1Q8NGV5 346 aa1.21□□□□□ -2.22
LMNB1-207ENST00000494185 CT55Q8WUE5 264 aa1.21□□□□□ -2.22
LMNB1-207ENST00000494185 C11orf40Q8WZ69 217 aa1.21□□□□□ -2.22
LMNB1-207ENST00000494185 PHB2Q99623 299 aa1.21□□□□□ -2.22
LMNB1-207ENST00000494185 PKMYT1Q99640 499 aa1.21□□□□□ -2.22
LMNB1-207ENST00000494185 BOLA2Q9H3K6 86 aa1.21□□□□□ -2.22
LMNB1-207ENST00000494185 TXNL4BQ9NX01 149 aaKnown RBP1.21□□□□□ -2.22
LMNB1-207ENST00000494185 OR52A1Q9UKL2 312 aa1.21□□□□□ -2.22
LMNB1-207ENST00000494185 ATAD5Q96QE3 1844 aa1.21□□□□□ -2.22
LMNB1-207ENST00000494185 SCRIBQ14160 1630 aa1.21□□□□□ -2.22
LMNB1-207ENST00000494185 PPIP5K1Q6PFW1 1433 aa1.21□□□□□ -2.22
LMNB1-207ENST00000494185 ARHGEF10O15013 1369 aa1.21□□□□□ -2.22
LMNB1-207ENST00000494185 DICER1Q9UPY3 1922 aaKnown RBP1.21□□□□□ -2.22
LMNB1-207ENST00000494185 NAV1Q8NEY1 1877 aa1.2□□□□□ -2.22
LMNB1-207ENST00000494185 NUP205Q92621 2012 aa1.2□□□□□ -2.22
LMNB1-207ENST00000494185 THADAQ6YHU6 1953 aa1.2□□□□□ -2.22
LMNB1-207ENST00000494185 TRBV20OR9-2A0A075B6H5 130 aa1.2□□□□□ -2.22
LMNB1-207ENST00000494185 FAM236DA0A1B0GTK5 79 aa1.2□□□□□ -2.22
LMNB1-207ENST00000494185 TMEM235A6NFC5 223 aa1.2□□□□□ -2.22
LMNB1-207ENST00000494185 IGLV6-57P01721 117 aa1.2□□□□□ -2.22
LMNB1-207ENST00000494185 C1QAP02745 245 aa1.2□□□□□ -2.22
LMNB1-207ENST00000494185 RBP1P09455 135 aa1.2□□□□□ -2.22
LMNB1-207ENST00000494185 UCHL1P09936 223 aa1.2□□□□□ -2.22
LMNB1-207ENST00000494185 ZNF705DP0CH99 300 aaPredicted RBP1.2□□□□□ -2.22
LMNB1-207ENST00000494185 FAM236CP0DP71 79 aa1.2□□□□□ -2.22
LMNB1-207ENST00000494185 SCGB1A1P11684 91 aa1.2□□□□□ -2.22
LMNB1-207ENST00000494185 ERP29P30040 261 aaKnown RBP1.2□□□□□ -2.22
LMNB1-207ENST00000494185 CA5AP35218 305 aa1.2□□□□□ -2.22
LMNB1-207ENST00000494185 CD200P41217 278 aa1.2□□□□□ -2.22
LMNB1-207ENST00000494185 AKR1C3P42330 323 aa1.2□□□□□ -2.22
LMNB1-207ENST00000494185 XCL1P47992 114 aa1.2□□□□□ -2.22
LMNB1-207ENST00000494185 SERPINB10P48595 397 aa1.2□□□□□ -2.22
LMNB1-207ENST00000494185 HSPE1P61604 102 aaKnown RBP1.2□□□□□ -2.22
LMNB1-207ENST00000494185 RPL30P62888 115 aaKnown RBP1.2□□□□□ -2.22
LMNB1-207ENST00000494185 CCL20P78556 96 aa1.2□□□□□ -2.22
LMNB1-207ENST00000494185 TFAMQ00059 246 aaKnown RBP1.2□□□□□ -2.22
LMNB1-207ENST00000494185 RUNX1Q01196 453 aa1.2□□□□□ -2.22
LMNB1-207ENST00000494185 BAMBIQ13145 260 aa1.2□□□□□ -2.22
LMNB1-207ENST00000494185 MIAQ16674 131 aa1.2□□□□□ -2.22
LMNB1-207ENST00000494185 WHAMMP3Q1A5X7 153 aa1.2□□□□□ -2.22
LMNB1-207ENST00000494185 FAM229BQ4G0N7 80 aa1.2□□□□□ -2.22
LMNB1-207ENST00000494185 DEFB134Q4QY38 66 aa1.2□□□□□ -2.22
LMNB1-207ENST00000494185 BRD3OSQ6XYD6 125 aa1.2□□□□□ -2.22
LMNB1-207ENST00000494185 Q6ZS49 121 aa1.2□□□□□ -2.22
LMNB1-207ENST00000494185 STX19Q8N4C7 294 aa1.2□□□□□ -2.22
LMNB1-207ENST00000494185 C12orf45Q8N5I9 185 aaPredicted RBP1.2□□□□□ -2.22
LMNB1-207ENST00000494185 ANKRD29Q8N6D5 301 aa1.2□□□□□ -2.22
LMNB1-207ENST00000494185 GDPD1Q8N9F7 314 aa1.2□□□□□ -2.22
LMNB1-207ENST00000494185 OR11H6Q8NGC7 330 aa1.2□□□□□ -2.22
LMNB1-207ENST00000494185 OR51A2Q8NGJ7 313 aa1.2□□□□□ -2.22
LMNB1-207ENST00000494185 OR13C4Q8NGS5 318 aa1.2□□□□□ -2.22
LMNB1-207ENST00000494185 OR10K1Q8NGX5 313 aa1.2□□□□□ -2.22
LMNB1-207ENST00000494185 CMTM2Q8TAZ6 248 aa1.2□□□□□ -2.22
LMNB1-207ENST00000494185 MRPL30Q8TCC3 161 aaKnown RBP1.2□□□□□ -2.22
LMNB1-207ENST00000494185 RPS4Y2Q8TD47 263 aa1.2□□□□□ -2.22
LMNB1-207ENST00000494185 LMX1AQ8TE12 382 aa1.2□□□□□ -2.22
LMNB1-207ENST00000494185 ACOT12Q8WYK0 555 aa1.2□□□□□ -2.22
LMNB1-207ENST00000494185 CAPZA3Q96KX2 299 aa1.2□□□□□ -2.22
LMNB1-207ENST00000494185 IGF2BP2-AS1Q96M15 143 aa1.2□□□□□ -2.22
LMNB1-207ENST00000494185 NMNAT3Q96T66 252 aa1.2□□□□□ -2.22
LMNB1-207ENST00000494185 TMEM147Q9BVK8 224 aa1.2□□□□□ -2.22
LMNB1-207ENST00000494185 GGACTQ9BVM4 153 aa1.2□□□□□ -2.22
LMNB1-207ENST00000494185 WDR61Q9GZS3 305 aaKnown RBP1.2□□□□□ -2.22
LMNB1-207ENST00000494185 TRABDQ9H4I3 376 aa1.2□□□□□ -2.22
LMNB1-207ENST00000494185 PSORS1C2Q9UIG4 136 aa1.2□□□□□ -2.22
LMNB1-207ENST00000494185 UFC1Q9Y3C8 167 aa1.2□□□□□ -2.22
LMNB1-207ENST00000494185 FAM215AQ9Y5M1 114 aa1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms