RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 PRCDQ00LT1 54 aa9.82□□□□□ -0.84
SNX17-208ENST00000493711 AKIRIN2Q53H80 203 aa9.82□□□□□ -0.84
SNX17-208ENST00000493711 Q6ZRM9 215 aa9.82□□□□□ -0.84
SNX17-208ENST00000493711 ZBTB8BQ8NAP8 495 aaPredicted RBP9.82□□□□□ -0.84
SNX17-208ENST00000493711 HSPB9Q9BQS6 159 aa9.82□□□□□ -0.84
SNX17-208ENST00000493711 PARP11Q9NR21 331 aa9.82□□□□□ -0.84
SNX17-208ENST00000493711 NDUFA4L2Q9NRX3 87 aa9.82□□□□□ -0.84
SNX17-208ENST00000493711 MGAT4CQ9UBM8 478 aa9.82□□□□□ -0.84
SNX17-208ENST00000493711 HSPB7Q9UBY9 170 aa9.82□□□□□ -0.84
SNX17-208ENST00000493711 NSG2Q9Y328 171 aa9.82□□□□□ -0.84
SNX17-208ENST00000493711 MSGN1A6NI15 193 aa9.81□□□□□ -0.84
SNX17-208ENST00000493711 INS-IGF2F8WCM5 200 aa9.81□□□□□ -0.84
SNX17-208ENST00000493711 CYB5BO43169 146 aa9.81□□□□□ -0.84
SNX17-208ENST00000493711 HKR1P10072 659 aa9.81□□□□□ -0.84
SNX17-208ENST00000493711 NKX2-1P43699 371 aaPredicted RBP9.81□□□□□ -0.84
SNX17-208ENST00000493711 ATP5IP56385 69 aaPredicted RBP9.81□□□□□ -0.84
SNX17-208ENST00000493711 SLC35B1P78383 322 aa9.81□□□□□ -0.84
SNX17-208ENST00000493711 TNP2Q05952 138 aa9.81□□□□□ -0.84
SNX17-208ENST00000493711 TNFRSF9Q07011 255 aa9.81□□□□□ -0.84
SNX17-208ENST00000493711 IZUMO4Q1ZYL8 232 aa9.81□□□□□ -0.84
SNX17-208ENST00000493711 Q6ZSV7 163 aa9.81□□□□□ -0.84
SNX17-208ENST00000493711 OR1L6Q8NGR2 347 aa9.81□□□□□ -0.84
SNX17-208ENST00000493711 GRPEL2Q8TAA5 225 aa9.81□□□□□ -0.84
SNX17-208ENST00000493711 CIB3Q96Q77 187 aaPredicted RBP9.81□□□□□ -0.84
SNX17-208ENST00000493711 FYTTD1Q96QD9 318 aaKnown RBP9.81□□□□□ -0.84
SNX17-208ENST00000493711 NMES1Q9C002 83 aa9.81□□□□□ -0.84
SNX17-208ENST00000493711 PLEKHA3Q9HB20 300 aa9.81□□□□□ -0.84
SNX17-208ENST00000493711 GSKIPQ9P0R6 139 aa9.81□□□□□ -0.84
SNX17-208ENST00000493711 TRAV41A0A0B4J266 112 aa9.8□□□□□ -0.84
SNX17-208ENST00000493711 TMEM89A2RUT3 159 aa9.8□□□□□ -0.84
SNX17-208ENST00000493711 HMX3A6NHT5 357 aa9.8□□□□□ -0.84
SNX17-208ENST00000493711 CEBPZOSA8MTT3 80 aa9.8□□□□□ -0.84
SNX17-208ENST00000493711 WRBO00258 174 aa9.8□□□□□ -0.84
SNX17-208ENST00000493711 CCSO14618 274 aa9.8□□□□□ -0.84
SNX17-208ENST00000493711 ATP6V0E1O15342 81 aa9.8□□□□□ -0.84
SNX17-208ENST00000493711 HOXA1P49639 335 aaPredicted RBP9.8□□□□□ -0.84
SNX17-208ENST00000493711 ERHP84090 104 aaKnown RBP9.8□□□□□ -0.84
SNX17-208ENST00000493711 ID3Q02535 119 aa9.8□□□□□ -0.84
SNX17-208ENST00000493711 SRSF4Q08170 494 aaKnown RBP9.8□□□□□ -0.84
SNX17-208ENST00000493711 NOXA1Q86UR1 476 aa9.8□□□□□ -0.84
SNX17-208ENST00000493711 COMMD1Q8N668 190 aa9.8□□□□□ -0.84
SNX17-208ENST00000493711 OR4D5Q8NGN0 318 aa9.8□□□□□ -0.84
SNX17-208ENST00000493711 OR10C1Q96KK4 312 aa9.8□□□□□ -0.84
SNX17-208ENST00000493711 HINT2Q9BX68 163 aa9.8□□□□□ -0.84
SNX17-208ENST00000493711 HIPK2Q9H2X6 1198 aa9.8□□□□□ -0.84
SNX17-208ENST00000493711 SH2D7A6NKC9 451 aaPredicted RBP9.79□□□□□ -0.84
SNX17-208ENST00000493711 NPIPB5A8MRT5 1133 aa9.79□□□□□ -0.84
SNX17-208ENST00000493711 TEX22C9J3V5 150 aa9.79□□□□□ -0.84
SNX17-208ENST00000493711 H3BUA1 57 aa9.79□□□□□ -0.84
SNX17-208ENST00000493711 SYNGR2O43760 224 aa9.79□□□□□ -0.84
SNX17-208ENST00000493711 RLN2P04090 185 aa9.79□□□□□ -0.84
SNX17-208ENST00000493711 PET100P0DJ07 73 aa9.79□□□□□ -0.84
SNX17-208ENST00000493711 EGR2P11161 476 aaPredicted RBP9.79□□□□□ -0.84
SNX17-208ENST00000493711 SUB1P53999 127 aaKnown RBP eCLIP9.79□□□□□ -0.84
SNX17-208ENST00000493711 RPP30P78346 268 aaKnown RBP9.79□□□□□ -0.84
SNX17-208ENST00000493711 SSBP2P81877 361 aaPredicted RBP9.79□□□□□ -0.84
SNX17-208ENST00000493711 NDPQ00604 133 aa9.79□□□□□ -0.84
SNX17-208ENST00000493711 FOXL1Q12952 345 aa9.79□□□□□ -0.84
SNX17-208ENST00000493711 FCN2Q15485 313 aa9.79□□□□□ -0.84
SNX17-208ENST00000493711 UNQ5815/PRO19632Q6UWF5 114 aa9.79□□□□□ -0.84
SNX17-208ENST00000493711 STPG2Q8N412 459 aa9.79□□□□□ -0.84
SNX17-208ENST00000493711 TTC9CQ8N5M4 171 aa9.79□□□□□ -0.84
SNX17-208ENST00000493711 RAB40CQ96S21 281 aa9.79□□□□□ -0.84
SNX17-208ENST00000493711 HEYLQ9NQ87 328 aaPredicted RBP9.79□□□□□ -0.84
SNX17-208ENST00000493711 CLPSL1A2RUU4 121 aa9.78□□□□□ -0.84
SNX17-208ENST00000493711 MPTX1A8MV57 137 aa9.78□□□□□ -0.84
SNX17-208ENST00000493711 BRI3O95415 125 aa9.78□□□□□ -0.84
SNX17-208ENST00000493711 OPN1MWP04001 364 aa9.78□□□□□ -0.84
SNX17-208ENST00000493711 GIPP09681 153 aaPredicted RBP9.78□□□□□ -0.84
SNX17-208ENST00000493711 OPN1MW2P0DN77 364 aa9.78□□□□□ -0.84
SNX17-208ENST00000493711 OPN1MW3P0DN78 364 aa9.78□□□□□ -0.84
SNX17-208ENST00000493711 HIST1H1BP16401 226 aaKnown RBP9.78□□□□□ -0.84
SNX17-208ENST00000493711 PVALBP20472 110 aaPredicted RBP9.78□□□□□ -0.84
SNX17-208ENST00000493711 SNCAP37840 140 aa9.78□□□□□ -0.84
SNX17-208ENST00000493711 H2BFSP57053 126 aa9.78□□□□□ -0.84
SNX17-208ENST00000493711 TAS2R30P59541 319 aa9.78□□□□□ -0.84
SNX17-208ENST00000493711 RAP2BP61225 183 aa9.78□□□□□ -0.84
SNX17-208ENST00000493711 FGL1Q08830 312 aa9.78□□□□□ -0.84
SNX17-208ENST00000493711 IL15RAQ13261 267 aa9.78□□□□□ -0.84
SNX17-208ENST00000493711 C2orf68Q2NKX9 166 aa9.78□□□□□ -0.84
SNX17-208ENST00000493711 CXorf66Q5JRM2 361 aaPredicted RBP9.78□□□□□ -0.84
SNX17-208ENST00000493711 C10orf55Q5SWW7 151 aa9.78□□□□□ -0.84
SNX17-208ENST00000493711 LFNGQ8NES3 379 aa9.78□□□□□ -0.84
SNX17-208ENST00000493711 LINC01006Q8NI28 216 aa9.78□□□□□ -0.84
SNX17-208ENST00000493711 FAM110DQ8TAY7 271 aaPredicted RBP9.78□□□□□ -0.84
SNX17-208ENST00000493711 DTD1Q8TEA8 209 aa9.78□□□□□ -0.84
SNX17-208ENST00000493711 CHAC2Q8WUX2 184 aa9.78□□□□□ -0.84
SNX17-208ENST00000493711 ZNF436Q9C0F3 470 aaPredicted RBP9.78□□□□□ -0.84
SNX17-208ENST00000493711 RBKSQ9H477 322 aa9.78□□□□□ -0.84
SNX17-208ENST00000493711 SERTAD4Q9NUC0 356 aa9.78□□□□□ -0.84
SNX17-208ENST00000493711 U3KQ87 197 aa9.78□□□□□ -0.84
SNX17-208ENST00000493711 IGLC7A0M8Q6 106 aa9.77□□□□□ -0.85
SNX17-208ENST00000493711 PSMB11A5LHX3 300 aa9.77□□□□□ -0.85
SNX17-208ENST00000493711 LINC01548A6NM66 108 aa9.77□□□□□ -0.85
SNX17-208ENST00000493711 SCAF4O95104 1147 aaKnown RBP9.77□□□□□ -0.85
SNX17-208ENST00000493711 SIX6O95475 246 aa9.77□□□□□ -0.85
SNX17-208ENST00000493711 SCGB1D2O95969 90 aa9.77□□□□□ -0.85
SNX17-208ENST00000493711 MBPP02686 304 aaPredicted RBP9.77□□□□□ -0.85
SNX17-208ENST00000493711 CRYGCP07315 174 aa9.77□□□□□ -0.85
SNX17-208ENST00000493711 OR13C7P0DN81 318 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms