RNA–Protein interactions for RNA: ENST00000492954.1

PTPRU-207, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 625 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-207ENST00000492954 OR1L8Q8NGR8 309 aa13.63□□□□□ -0.23
PTPRU-207ENST00000492954 CXorf58Q96LI9 332 aa13.63□□□□□ -0.23
PTPRU-207ENST00000492954 TM2D3Q9BRN9 247 aa13.63□□□□□ -0.23
PTPRU-207ENST00000492954 HINT2Q9BX68 163 aa13.63□□□□□ -0.23
PTPRU-207ENST00000492954 EXTL2Q9UBQ6 330 aa13.63□□□□□ -0.23
PTPRU-207ENST00000492954 ZNF320A2RRD8 509 aa13.62□□□□□ -0.23
PTPRU-207ENST00000492954 SNAPC5O75971 98 aa13.62□□□□□ -0.23
PTPRU-207ENST00000492954 CLEC3BP05452 202 aa13.62□□□□□ -0.23
PTPRU-207ENST00000492954 S100GP29377 79 aa13.62□□□□□ -0.23
PTPRU-207ENST00000492954 GDPD1Q8N9F7 314 aa13.62□□□□□ -0.23
PTPRU-207ENST00000492954 OR52I2Q8NH67 350 aa13.62□□□□□ -0.23
PTPRU-207ENST00000492954 ZNF502Q8TBZ5 544 aa13.62□□□□□ -0.23
PTPRU-207ENST00000492954 CACNG8Q8WXS5 425 aa13.62□□□□□ -0.23
PTPRU-207ENST00000492954 MRPS26Q9BYN8 205 aaKnown RBP13.62□□□□□ -0.23
PTPRU-207ENST00000492954 NDUFA4L2Q9NRX3 87 aa13.62□□□□□ -0.23
PTPRU-207ENST00000492954 KLK11Q9UBX7 282 aa13.62□□□□□ -0.23
PTPRU-207ENST00000492954 OR51B2Q9Y5P1 312 aa13.62□□□□□ -0.23
PTPRU-207ENST00000492954 SELENOKQ9Y6D0 94 aa13.62□□□□□ -0.23
PTPRU-207ENST00000492954 ZNF785A8K8V0 405 aa13.61□□□□□ -0.23
PTPRU-207ENST00000492954 SERPINE2P07093 398 aa13.61□□□□□ -0.23
PTPRU-207ENST00000492954 GPR183P32249 361 aa13.61□□□□□ -0.23
PTPRU-207ENST00000492954 ALDH3B2P48448 385 aa13.61□□□□□ -0.23
PTPRU-207ENST00000492954 UCP3P55916 312 aa13.61□□□□□ -0.23
PTPRU-207ENST00000492954 FAM106AQ4KMX7 169 aa13.61□□□□□ -0.23
PTPRU-207ENST00000492954 SLC38A6Q8IZM9 456 aa13.61□□□□□ -0.23
PTPRU-207ENST00000492954 CADM3Q8N126 398 aa13.61□□□□□ -0.23
PTPRU-207ENST00000492954 TUBA4BQ9H853 241 aa13.61□□□□□ -0.23
PTPRU-207ENST00000492954 TMEM213A2RRL7 107 aa13.6□□□□□ -0.23
PTPRU-207ENST00000492954 DBX1A6NMT0 343 aa13.6□□□□□ -0.23
PTPRU-207ENST00000492954 PTBP1P26599 531 aaKnown RBP eCLIP13.6□□□□□ -0.23
PTPRU-207ENST00000492954 MFAP2P55001 183 aa13.6□□□□□ -0.23
PTPRU-207ENST00000492954 CD81P60033 236 aa13.6□□□□□ -0.23
PTPRU-207ENST00000492954 HSD17B13Q7Z5P4 300 aaPredicted RBP13.6□□□□□ -0.23
PTPRU-207ENST00000492954 GPR141Q7Z602 305 aa13.6□□□□□ -0.23
PTPRU-207ENST00000492954 LSM10Q969L4 123 aaKnown RBP13.6□□□□□ -0.23
PTPRU-207ENST00000492954 TECRQ9NZ01 308 aaKnown RBP13.6□□□□□ -0.23
PTPRU-207ENST00000492954 THYN1Q9P016 225 aa13.6□□□□□ -0.23
PTPRU-207ENST00000492954 PRNDQ9UKY0 176 aa13.6□□□□□ -0.23
PTPRU-207ENST00000492954 IGHV3-35A0A0C4DH35 117 aa13.59□□□□□ -0.23
PTPRU-207ENST00000492954 A8MWP6 167 aa13.59□□□□□ -0.23
PTPRU-207ENST00000492954 CYB5BO43169 146 aa13.59□□□□□ -0.23
PTPRU-207ENST00000492954 IGKV1-39P01597 117 aa13.59□□□□□ -0.23
PTPRU-207ENST00000492954 CD3DP04234 171 aa13.59□□□□□ -0.23
PTPRU-207ENST00000492954 IGKV1D-39P04432 117 aa13.59□□□□□ -0.23
PTPRU-207ENST00000492954 IFNA6P05013 189 aa13.59□□□□□ -0.23
PTPRU-207ENST00000492954 CD7P09564 240 aa13.59□□□□□ -0.23
PTPRU-207ENST00000492954 CBLN1P23435 193 aa13.59□□□□□ -0.23
PTPRU-207ENST00000492954 GUCA2BQ16661 112 aa13.59□□□□□ -0.23
PTPRU-207ENST00000492954 RNASE10Q5GAN6 216 aaKnown RBP13.59□□□□□ -0.23
PTPRU-207ENST00000492954 SLC25A24Q6NUK1 477 aa13.59□□□□□ -0.23
PTPRU-207ENST00000492954 UNQ9165/PRO28630Q6UXU0 137 aa13.59□□□□□ -0.23
PTPRU-207ENST00000492954 LAX1Q8IWV1 398 aa13.59□□□□□ -0.23
PTPRU-207ENST00000492954 VN1R17PQ8TDU5 208 aa13.59□□□□□ -0.23
PTPRU-207ENST00000492954 WDR89Q96FK6 387 aaPredicted RBP13.59□□□□□ -0.23
PTPRU-207ENST00000492954 ABHD1Q96SE0 405 aa13.59□□□□□ -0.23
PTPRU-207ENST00000492954 NEURL2Q9BR09 285 aa13.59□□□□□ -0.23
PTPRU-207ENST00000492954 MIXL1Q9H2W2 232 aa13.59□□□□□ -0.23
PTPRU-207ENST00000492954 PLEKHA3Q9HB20 300 aa13.59□□□□□ -0.23
PTPRU-207ENST00000492954 FAM212BQ9NTI7 297 aaPredicted RBP13.59□□□□□ -0.23
PTPRU-207ENST00000492954 TMEM14BQ9NUH8 114 aa13.59□□□□□ -0.23
PTPRU-207ENST00000492954 MTFP1Q9UDX5 166 aa13.59□□□□□ -0.23
PTPRU-207ENST00000492954 F11RQ9Y624 299 aaKnown RBP13.59□□□□□ -0.23
PTPRU-207ENST00000492954 IGHV3-21A0A0B4J1V1 117 aa13.58□□□□□ -0.24
PTPRU-207ENST00000492954 C15orf61A6NNL5 157 aa13.58□□□□□ -0.24
PTPRU-207ENST00000492954 C3orf84H3BNL1 204 aa13.58□□□□□ -0.24
PTPRU-207ENST00000492954 PGAM2P15259 253 aa13.58□□□□□ -0.24
PTPRU-207ENST00000492954 PI3P19957 117 aa13.58□□□□□ -0.24
PTPRU-207ENST00000492954 SPCS2Q15005 226 aa13.58□□□□□ -0.24
PTPRU-207ENST00000492954 HAGHQ16775 308 aa13.58□□□□□ -0.24
PTPRU-207ENST00000492954 TM4SF20Q53R12 229 aa13.58□□□□□ -0.24
PTPRU-207ENST00000492954 PLET1Q6UQ28 207 aa13.58□□□□□ -0.24
PTPRU-207ENST00000492954 OR5B3Q8NH48 314 aa13.58□□□□□ -0.24
PTPRU-207ENST00000492954 MUC7Q8TAX7 377 aa13.58□□□□□ -0.24
PTPRU-207ENST00000492954 SEC22AQ96IW7 307 aa13.58□□□□□ -0.24
PTPRU-207ENST00000492954 TSC22D3Q99576 134 aa13.58□□□□□ -0.24
PTPRU-207ENST00000492954 MLXQ9UH92 298 aa13.58□□□□□ -0.24
PTPRU-207ENST00000492954 OR2T8A6NH00 312 aa13.57□□□□□ -0.24
PTPRU-207ENST00000492954 TGOLN2O43493 480 aa13.57□□□□□ -0.24
PTPRU-207ENST00000492954 TPPPO94811 219 aa13.57□□□□□ -0.24
PTPRU-207ENST00000492954 H2BFWTQ7Z2G1 175 aa13.57□□□□□ -0.24
PTPRU-207ENST00000492954 LHFPL1Q86WI0 220 aa13.57□□□□□ -0.24
PTPRU-207ENST00000492954 UXS1Q8NBZ7 420 aa13.57□□□□□ -0.24
PTPRU-207ENST00000492954 OR4D10Q8NGI6 311 aa13.57□□□□□ -0.24
PTPRU-207ENST00000492954 MRGPRFQ96AM1 343 aa13.57□□□□□ -0.24
PTPRU-207ENST00000492954 WFDC10AQ9H1F0 79 aa13.57□□□□□ -0.24
PTPRU-207ENST00000492954 SLC2A8Q9NY64 477 aa13.57□□□□□ -0.24
PTPRU-207ENST00000492954 FKBP11Q9NYL4 201 aa13.57□□□□□ -0.24
PTPRU-207ENST00000492954 RND3P61587 244 aa13.56□□□□□ -0.24
PTPRU-207ENST00000492954 ZNF57Q68EA5 555 aaPredicted RBP13.56□□□□□ -0.24
PTPRU-207ENST00000492954 BTNL8Q6UX41 500 aa13.56□□□□□ -0.24
PTPRU-207ENST00000492954 CLVS1Q8IUQ0 354 aaPredicted RBP13.56□□□□□ -0.24
PTPRU-207ENST00000492954 TMEM61Q8N0U2 210 aa13.56□□□□□ -0.24
PTPRU-207ENST00000492954 ARRDC1Q8N5I2 433 aa13.56□□□□□ -0.24
PTPRU-207ENST00000492954 DEFB125Q8N687 156 aa13.56□□□□□ -0.24
PTPRU-207ENST00000492954 TMEM56Q96MV1 263 aa13.56□□□□□ -0.24
PTPRU-207ENST00000492954 SPATA25Q9BR10 227 aa13.56□□□□□ -0.24
PTPRU-207ENST00000492954 PALMDQ9NP74 551 aa13.56□□□□□ -0.24
PTPRU-207ENST00000492954 K7EIM0 57 aa13.55□□□□□ -0.24
PTPRU-207ENST00000492954 CTDSP2O14595 271 aa13.55□□□□□ -0.24
PTPRU-207ENST00000492954 RGS5O15539 181 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms