RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 TMEM140Q9NV12 185 aa9.49□□□□□ -0.89
CRNKL1-204ENST00000490910 IGHV2-26A0A0B4J1V2 119 aa9.49□□□□□ -0.89
CRNKL1-204ENST00000490910 hDV102S1A0JD36 115 aa9.49□□□□□ -0.89
CRNKL1-204ENST00000490910 CA1P00915 261 aaPredicted RBP9.49□□□□□ -0.89
CRNKL1-204ENST00000490910 PAX2Q02962 417 aa9.49□□□□□ -0.89
CRNKL1-204ENST00000490910 ZNF718Q3SXZ3 478 aa9.49□□□□□ -0.89
CRNKL1-204ENST00000490910 LINC00696Q6ZRV3 163 aa9.49□□□□□ -0.89
CRNKL1-204ENST00000490910 Q6ZS49 121 aa9.49□□□□□ -0.89
CRNKL1-204ENST00000490910 FLYWCH2Q96CP2 140 aaKnown RBP9.49□□□□□ -0.89
CRNKL1-204ENST00000490910 LY96Q9Y6Y9 160 aa9.49□□□□□ -0.89
CRNKL1-204ENST00000490910 LOC389332A0A1B0GUA5 103 aa9.49□□□□□ -0.89
CRNKL1-204ENST00000490910 HIGD1CA8MV81 97 aa9.49□□□□□ -0.89
CRNKL1-204ENST00000490910 ZFP36L1Q07352 338 aaKnown RBP9.49□□□□□ -0.89
CRNKL1-204ENST00000490910 ZNF766Q5HY98 468 aa9.49□□□□□ -0.89
CRNKL1-204ENST00000490910 CLEC2AQ6UVW9 174 aa9.49□□□□□ -0.89
CRNKL1-204ENST00000490910 TUSC5Q8IXB3 177 aa9.49□□□□□ -0.89
CRNKL1-204ENST00000490910 C19orf24Q9BVV8 132 aa9.49□□□□□ -0.89
CRNKL1-204ENST00000490910 HSPE1P61604 102 aaKnown RBP9.48□□□□□ -0.89
CRNKL1-204ENST00000490910 VKORC1L1Q8N0U8 176 aa9.48□□□□□ -0.89
CRNKL1-204ENST00000490910 ZNF114Q8NC26 417 aa9.48□□□□□ -0.89
CRNKL1-204ENST00000490910 DEFB108BQ8NET1 73 aa9.48□□□□□ -0.89
CRNKL1-204ENST00000490910 OR1B1Q8NGR6 318 aa9.48□□□□□ -0.89
CRNKL1-204ENST00000490910 SGK494Q96LW2 274 aa9.48□□□□□ -0.89
CRNKL1-204ENST00000490910 SRXN1Q9BYN0 137 aa9.48□□□□□ -0.89
CRNKL1-204ENST00000490910 A0A087X0K7 114 aa9.48□□□□□ -0.89
CRNKL1-204ENST00000490910 CEBPDP49716 269 aaPredicted RBP9.48□□□□□ -0.89
CRNKL1-204ENST00000490910 EFNB3Q15768 340 aa9.48□□□□□ -0.89
CRNKL1-204ENST00000490910 ASCL4Q6XD76 172 aa9.48□□□□□ -0.89
CRNKL1-204ENST00000490910 REPIN1Q9BWE0 567 aaKnown RBP9.48□□□□□ -0.89
CRNKL1-204ENST00000490910 THYN1Q9P016 225 aa9.48□□□□□ -0.89
CRNKL1-204ENST00000490910 ARHGAP21Q5T5U3 1957 aa9.48□□□□□ -0.89
CRNKL1-204ENST00000490910 ESDP10768 282 aa9.48□□□□□ -0.89
CRNKL1-204ENST00000490910 IGFBP2P18065 325 aa9.48□□□□□ -0.89
CRNKL1-204ENST00000490910 LHX2P50458 406 aa9.48□□□□□ -0.89
CRNKL1-204ENST00000490910 PSG9Q00887 426 aa9.48□□□□□ -0.89
CRNKL1-204ENST00000490910 LRRC29Q8WV35 223 aa9.48□□□□□ -0.89
CRNKL1-204ENST00000490910 NABP1Q96AH0 204 aa9.48□□□□□ -0.89
CRNKL1-204ENST00000490910 MS4A6AQ9H2W1 248 aa9.48□□□□□ -0.89
CRNKL1-204ENST00000490910 ZNF257Q9Y2Q1 563 aa9.48□□□□□ -0.89
CRNKL1-204ENST00000490910 PGPA6NDG6 321 aa9.47□□□□□ -0.89
CRNKL1-204ENST00000490910 IGLL1P15814 213 aa9.47□□□□□ -0.89
CRNKL1-204ENST00000490910 C1QTNF5Q9BXJ0 243 aa9.47□□□□□ -0.89
CRNKL1-204ENST00000490910 TRAV24A0A0B4J272 114 aa9.47□□□□□ -0.89
CRNKL1-204ENST00000490910 F2Z2F3 143 aa9.47□□□□□ -0.89
CRNKL1-204ENST00000490910 LINC01565O15544 149 aa9.47□□□□□ -0.89
CRNKL1-204ENST00000490910 PERPQ96FX8 193 aa9.47□□□□□ -0.89
CRNKL1-204ENST00000490910 NAA38Q9BRA0 125 aaKnown RBP9.47□□□□□ -0.89
CRNKL1-204ENST00000490910 GGTLC1Q9BX51 225 aa9.47□□□□□ -0.89
CRNKL1-204ENST00000490910 CHRNA10Q9GZZ6 450 aa9.47□□□□□ -0.89
CRNKL1-204ENST00000490910 C12orf77C9JDV5 145 aa9.47□□□□□ -0.89
CRNKL1-204ENST00000490910 MLNRO43193 412 aa9.47□□□□□ -0.89
CRNKL1-204ENST00000490910 LINC00271P0C7V0 271 aa9.47□□□□□ -0.89
CRNKL1-204ENST00000490910 TREML4Q6UXN2 200 aa9.47□□□□□ -0.89
CRNKL1-204ENST00000490910 HAPLN4Q86UW8 402 aa9.47□□□□□ -0.89
CRNKL1-204ENST00000490910 CSTL1Q9H114 145 aa9.47□□□□□ -0.89
CRNKL1-204ENST00000490910 VSTM5A8MXK1 200 aa9.46□□□□□ -0.89
CRNKL1-204ENST00000490910 K7EP13 123 aa9.46□□□□□ -0.89
CRNKL1-204ENST00000490910 LYRM7Q5U5X0 104 aa9.46□□□□□ -0.89
CRNKL1-204ENST00000490910 TMEM42Q69YG0 159 aa9.46□□□□□ -0.89
CRNKL1-204ENST00000490910 KIF26AQ9ULI4 1882 aaPredicted RBP9.46□□□□□ -0.89
CRNKL1-204ENST00000490910 MUC15Q8N387 334 aa9.46□□□□□ -0.89
CRNKL1-204ENST00000490910 GTSF1LQ9H1H1 148 aa9.46□□□□□ -0.89
CRNKL1-204ENST00000490910 CXXC4Q9H2H0 198 aa9.46□□□□□ -0.89
CRNKL1-204ENST00000490910 HIF1ANQ9NWT6 349 aa9.46□□□□□ -0.89
CRNKL1-204ENST00000490910 PLAUP00749 431 aa9.46□□□□□ -0.9
CRNKL1-204ENST00000490910 RBX1P62877 108 aa9.46□□□□□ -0.9
CRNKL1-204ENST00000490910 CCL7P80098 99 aa9.46□□□□□ -0.9
CRNKL1-204ENST00000490910 TM4SF20Q53R12 229 aa9.46□□□□□ -0.9
CRNKL1-204ENST00000490910 TMEM108Q6UXF1 575 aa9.46□□□□□ -0.9
CRNKL1-204ENST00000490910 WDR31Q8NA23 367 aa9.46□□□□□ -0.9
CRNKL1-204ENST00000490910 FER1L6-AS1Q8NA97 138 aa9.46□□□□□ -0.9
CRNKL1-204ENST00000490910 CDX2Q99626 313 aaPredicted RBP9.46□□□□□ -0.9
CRNKL1-204ENST00000490910 A0A1W2PRE2 83 aa9.45□□□□□ -0.9
CRNKL1-204ENST00000490910 RNPS1Q15287 305 aaKnown RBP9.45□□□□□ -0.9
CRNKL1-204ENST00000490910 TMEM144Q7Z5S9 345 aa9.45□□□□□ -0.9
CRNKL1-204ENST00000490910 IGKV1-6A0A0C4DH72 117 aa9.45□□□□□ -0.9
CRNKL1-204ENST00000490910 CELA2AP08217 269 aa9.45□□□□□ -0.9
CRNKL1-204ENST00000490910 SCGB1C2P0DMR2 95 aa9.45□□□□□ -0.9
CRNKL1-204ENST00000490910 CD46P15529 392 aa9.45□□□□□ -0.9
CRNKL1-204ENST00000490910 C5orf17Q8NAS9 161 aa9.45□□□□□ -0.9
CRNKL1-204ENST00000490910 C18orf32Q8TCD1 76 aa9.45□□□□□ -0.9
CRNKL1-204ENST00000490910 MRPL32Q9BYC8 188 aaKnown RBP9.45□□□□□ -0.9
CRNKL1-204ENST00000490910 IGLC7A0M8Q6 106 aa9.45□□□□□ -0.9
CRNKL1-204ENST00000490910 C19orf67A6NJJ6 358 aa9.45□□□□□ -0.9
CRNKL1-204ENST00000490910 SYS1-DBNDD2H3BUS1 97 aa9.45□□□□□ -0.9
CRNKL1-204ENST00000490910 PEX7O00628 323 aa9.45□□□□□ -0.9
CRNKL1-204ENST00000490910 NXPH1P58417 271 aa9.45□□□□□ -0.9
CRNKL1-204ENST00000490910 OR10X1Q8NGY0 326 aa9.45□□□□□ -0.9
CRNKL1-204ENST00000490910 CHCHD1Q96BP2 118 aaKnown RBP9.45□□□□□ -0.9
CRNKL1-204ENST00000490910 SLC25A10Q9UBX3 287 aaPredicted RBP9.45□□□□□ -0.9
CRNKL1-204ENST00000490910 DNAJC13O75165 2243 aa9.45□□□□□ -0.9
CRNKL1-204ENST00000490910 A0A0G2JLM5 398 aa9.45□□□□□ -0.9
CRNKL1-204ENST00000490910 M0R296 226 aa9.45□□□□□ -0.9
CRNKL1-204ENST00000490910 APOHP02749 345 aaPredicted RBP9.45□□□□□ -0.9
CRNKL1-204ENST00000490910 RASL11AQ6T310 242 aa9.45□□□□□ -0.9
CRNKL1-204ENST00000490910 OR2Z1Q8NG97 314 aa9.45□□□□□ -0.9
CRNKL1-204ENST00000490910 SLC25A40Q8TBP6 338 aa9.45□□□□□ -0.9
CRNKL1-204ENST00000490910 IGHV1OR15-9A0A0B4J2B8 117 aa9.44□□□□□ -0.9
CRNKL1-204ENST00000490910 KLRC4-KLRK1H3BQV0 150 aa9.44□□□□□ -0.9
CRNKL1-204ENST00000490910 SSTR5P35346 364 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms