RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 SULT1A3P0DMM9 295 aa2.14□□□□□ -2.07
DEPDC1-204ENST00000489862 SULT1A4P0DMN0 295 aa2.14□□□□□ -2.07
DEPDC1-204ENST00000489862 CD28P10747 220 aa2.14□□□□□ -2.07
DEPDC1-204ENST00000489862 CRISP2P16562 243 aa2.14□□□□□ -2.07
DEPDC1-204ENST00000489862 CCR6P51684 374 aa2.14□□□□□ -2.07
DEPDC1-204ENST00000489862 MNAT1P51948 309 aa2.14□□□□□ -2.07
DEPDC1-204ENST00000489862 GNG5P63218 68 aa2.14□□□□□ -2.07
DEPDC1-204ENST00000489862 ELOCQ15369 112 aa2.14□□□□□ -2.07
DEPDC1-204ENST00000489862 SURF2Q15527 256 aaPredicted RBP2.14□□□□□ -2.07
DEPDC1-204ENST00000489862 KCNJ8Q15842 424 aa2.14□□□□□ -2.07
DEPDC1-204ENST00000489862 ATAD3CQ5T2N8 411 aa2.14□□□□□ -2.07
DEPDC1-204ENST00000489862 C9orf64Q5T6V5 341 aa2.14□□□□□ -2.07
DEPDC1-204ENST00000489862 N4BP2L1Q5TBK1 243 aaPredicted RBP2.14□□□□□ -2.07
DEPDC1-204ENST00000489862 SBSNQ6UWP8 590 aa2.14□□□□□ -2.07
DEPDC1-204ENST00000489862 CYHR1Q6ZMK1 362 aa2.14□□□□□ -2.07
DEPDC1-204ENST00000489862 TMPPEQ6ZT21 453 aa2.14□□□□□ -2.07
DEPDC1-204ENST00000489862 HIST2H3AQ71DI3 136 aa2.14□□□□□ -2.07
DEPDC1-204ENST00000489862 H2AFVQ71UI9 128 aa2.14□□□□□ -2.07
DEPDC1-204ENST00000489862 LINC01551Q86U37 167 aa2.14□□□□□ -2.07
DEPDC1-204ENST00000489862 OSR2Q8N2R0 312 aa2.14□□□□□ -2.07
DEPDC1-204ENST00000489862 EXOC3-AS1Q8N2X6 119 aa2.14□□□□□ -2.07
DEPDC1-204ENST00000489862 PACRGLQ8N7B6 248 aa2.14□□□□□ -2.07
DEPDC1-204ENST00000489862 DCAF4L2Q8NA75 395 aa2.14□□□□□ -2.07
DEPDC1-204ENST00000489862 OR2T27Q8NH04 317 aa2.14□□□□□ -2.07
DEPDC1-204ENST00000489862 OR1L1Q8NH94 360 aa2.14□□□□□ -2.07
DEPDC1-204ENST00000489862 CIRBP-AS1Q8TBR5 109 aa2.14□□□□□ -2.07
DEPDC1-204ENST00000489862 RBMXL1Q96E39 390 aaKnown RBP2.14□□□□□ -2.07
DEPDC1-204ENST00000489862 DCUN1D1Q96GG9 259 aa2.14□□□□□ -2.07
DEPDC1-204ENST00000489862 REEP6Q96HR9 211 aa2.14□□□□□ -2.07
DEPDC1-204ENST00000489862 SLC35E1Q96K37 410 aa2.14□□□□□ -2.07
DEPDC1-204ENST00000489862 SNRNP25Q9BV90 132 aaKnown RBP2.14□□□□□ -2.07
DEPDC1-204ENST00000489862 TRIM4Q9C037 500 aa2.14□□□□□ -2.07
DEPDC1-204ENST00000489862 TMEM222Q9H0R3 208 aa2.14□□□□□ -2.07
DEPDC1-204ENST00000489862 PDFQ9HBH1 243 aa2.14□□□□□ -2.07
DEPDC1-204ENST00000489862 MMP26Q9NRE1 261 aa2.14□□□□□ -2.07
DEPDC1-204ENST00000489862 PXMP4Q9Y6I8 212 aa2.14□□□□□ -2.07
DEPDC1-204ENST00000489862 SMG1Q96Q15 3661 aaKnown RBP2.14□□□□□ -2.07
DEPDC1-204ENST00000489862 ITPR1Q14643 2758 aa2.14□□□□□ -2.07
DEPDC1-204ENST00000489862 SPAG17Q6Q759 2223 aa2.14□□□□□ -2.07
DEPDC1-204ENST00000489862 ASCC3Q8N3C0 2202 aaKnown RBP2.14□□□□□ -2.07
DEPDC1-204ENST00000489862 TRAV26-2A0A0B4J265 109 aa2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 A0A0X1KG70 313 aa2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 hADV38S2A0JD32 116 aa2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 SOCS1O15524 211 aa2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 PROSCO94903 275 aa2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 SERPINA7P05543 415 aa2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 ZNF806P0C7X5 589 aa2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 CGB3P0DN86 165 aa2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 CGB7P0DN87 165 aa2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 IDO1P14902 403 aa2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 CRABP1P29762 137 aa2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 SDC4P31431 198 aa2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 CXCL12P48061 93 aa2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 LHX2P50458 406 aa2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 PPP1CAP62136 330 aa2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 HIST1H3AP68431 136 aa2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 H3F3AP84243 136 aa2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 FLI1Q01543 452 aaPredicted RBP2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 PAFAH1B3Q15102 231 aaKnown RBP2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 RNASE13Q5GAN3 156 aaKnown RBP2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 BRMS1LQ5PSV4 323 aa2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 C1orf174Q8IYL3 243 aa2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 UMODL1-AS1Q8N2C9 162 aa2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 DEFB119Q8N690 84 aa2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 OR8B12Q8NGG6 310 aa2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 OR10G4Q8NGN3 311 aa2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 OR52N1Q8NH53 320 aa2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 LHFPL5Q8TAF8 219 aa2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 MAFIPQ8WZ33 124 aa2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 RMND5BQ96G75 393 aaPredicted RBP2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 BTF3L4Q96K17 158 aa2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 ERMAPQ96PL5 475 aaPredicted RBP2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 MS4A8Q9BY19 250 aa2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 PLA2G12AQ9BZM1 189 aa2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 ULBP3Q9BZM4 244 aa2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 CXorf21Q9HAI6 301 aa2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 NOX3Q9HBY0 568 aa2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 ZNF331Q9NQX6 463 aaPredicted RBP2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 TMEM38BQ9NVV0 291 aa2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 ZNF492Q9P255 531 aa2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 NYNRINQ9P2P1 1898 aaKnown RBP2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 LINC00527Q9UJ94 153 aa2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 PCYT1BQ9Y5K3 369 aaPredicted RBP2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 RFNGQ9Y644 331 aa2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 PI4KAP42356 2102 aa2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 TDRD6O60522 2096 aaKnown RBP2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 ANKRD12Q6UB98 2062 aa2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 LOC400499M0QZD8 3231 aa2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 PCNX2A6NKB5 2137 aa2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 TNRC6BQ9UPQ9 1833 aaKnown RBP2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 MGAQ8IWI9 3026 aa2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 IGHV1OR15-9A0A0B4J2B8 117 aa2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 C5orf49A4QMS7 147 aa2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 PDE6DO43924 150 aa2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 ATG12O94817 140 aa2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 LY6G6DO95868 133 aa2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 IGKV3-15P01624 115 aa2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 IGLV3-19P01714 112 aa2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 APODP05090 189 aa2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 CRYBA1P05813 215 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 148.9 ms