RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 SLC23A3Q6PIS1 610 aa9.63□□□□□ -0.87
SEC61A1-205ENST00000483956 TMEM14EPQ6UXP3 125 aa9.63□□□□□ -0.87
SEC61A1-205ENST00000483956 C18orf32Q8TCD1 76 aa9.63□□□□□ -0.87
SEC61A1-205ENST00000483956 V9GYV3 84 aa9.63□□□□□ -0.87
SEC61A1-205ENST00000483956 CFAP54Q96N23 3096 aa9.62□□□□□ -0.87
SEC61A1-205ENST00000483956 RFPL3SP0C7P2 107 aa9.62□□□□□ -0.87
SEC61A1-205ENST00000483956 FOXE3Q13461 319 aa9.62□□□□□ -0.87
SEC61A1-205ENST00000483956 ZNF585BQ52M93 769 aa9.62□□□□□ -0.87
SEC61A1-205ENST00000483956 SIGMAR1Q99720 223 aa9.62□□□□□ -0.87
SEC61A1-205ENST00000483956 NPCDR1Q9BY65 106 aa9.62□□□□□ -0.87
SEC61A1-205ENST00000483956 C5orf49A4QMS7 147 aa9.62□□□□□ -0.87
SEC61A1-205ENST00000483956 TGFBR3Q03167 851 aa9.62□□□□□ -0.87
SEC61A1-205ENST00000483956 PSG3Q16557 428 aa9.62□□□□□ -0.87
SEC61A1-205ENST00000483956 COMMD5Q9GZQ3 224 aa9.62□□□□□ -0.87
SEC61A1-205ENST00000483956 CHODLQ9H9P2 273 aa9.62□□□□□ -0.87
SEC61A1-205ENST00000483956 DLL3Q9NYJ7 618 aa9.62□□□□□ -0.87
SEC61A1-205ENST00000483956 OR1A1Q9P1Q5 309 aa9.62□□□□□ -0.87
SEC61A1-205ENST00000483956 CELSR3Q9NYQ7 3312 aa9.61□□□□□ -0.87
SEC61A1-205ENST00000483956 CLDN14O95500 239 aa9.61□□□□□ -0.87
SEC61A1-205ENST00000483956 PLP1P60201 277 aa9.61□□□□□ -0.87
SEC61A1-205ENST00000483956 CKS1BP61024 79 aa9.61□□□□□ -0.87
SEC61A1-205ENST00000483956 CX3CL1P78423 397 aa9.61□□□□□ -0.87
SEC61A1-205ENST00000483956 WIPI1Q5MNZ9 446 aaPredicted RBP9.61□□□□□ -0.87
SEC61A1-205ENST00000483956 NCOR1O75376 2440 aa9.61□□□□□ -0.87
SEC61A1-205ENST00000483956 SPAARA0A1B0GVQ0 90 aa9.61□□□□□ -0.87
SEC61A1-205ENST00000483956 MRPL33O75394 65 aaKnown RBP9.61□□□□□ -0.87
SEC61A1-205ENST00000483956 TMEM147Q9BVK8 224 aa9.61□□□□□ -0.87
SEC61A1-205ENST00000483956 PKIBQ9C010 78 aa9.61□□□□□ -0.87
SEC61A1-205ENST00000483956 ZNF407Q9C0G0 2248 aa9.61□□□□□ -0.87
SEC61A1-205ENST00000483956 CGAP01215 116 aa9.61□□□□□ -0.87
SEC61A1-205ENST00000483956 CCNOP22674 350 aa9.61□□□□□ -0.87
SEC61A1-205ENST00000483956 RNFT1Q5M7Z0 435 aa9.61□□□□□ -0.87
SEC61A1-205ENST00000483956 MPC1Q9Y5U8 109 aa9.61□□□□□ -0.87
SEC61A1-205ENST00000483956 K7EP34 96 aa9.6□□□□□ -0.87
SEC61A1-205ENST00000483956 IGHV3-9P01782 118 aa9.6□□□□□ -0.87
SEC61A1-205ENST00000483956 STAG3L3P0CL85 134 aa9.6□□□□□ -0.87
SEC61A1-205ENST00000483956 FOLR3P41439 243 aa9.6□□□□□ -0.87
SEC61A1-205ENST00000483956 UQCRFS1P47985 274 aa9.6□□□□□ -0.87
SEC61A1-205ENST00000483956 SLAQ13239 276 aa9.6□□□□□ -0.87
SEC61A1-205ENST00000483956 FXYD3Q14802 87 aa9.6□□□□□ -0.87
SEC61A1-205ENST00000483956 IL1F10Q8WWZ1 152 aa9.6□□□□□ -0.87
SEC61A1-205ENST00000483956 ZNF488Q96MN9 340 aa9.6□□□□□ -0.87
SEC61A1-205ENST00000483956 PRRG4Q9BZD6 226 aa9.6□□□□□ -0.87
SEC61A1-205ENST00000483956 NPFFR1Q9GZQ6 430 aa9.6□□□□□ -0.87
SEC61A1-205ENST00000483956 H3BUT2 72 aa9.6□□□□□ -0.87
SEC61A1-205ENST00000483956 APCSP02743 223 aa9.6□□□□□ -0.87
SEC61A1-205ENST00000483956 RPL31P62899 125 aaKnown RBP9.6□□□□□ -0.87
SEC61A1-205ENST00000483956 GNG3P63215 75 aa9.6□□□□□ -0.87
SEC61A1-205ENST00000483956 Q6P435 159 aa9.6□□□□□ -0.87
SEC61A1-205ENST00000483956 RNASEKQ6P5S7 137 aaKnown RBP9.6□□□□□ -0.87
SEC61A1-205ENST00000483956 STPG3Q8N7X2 389 aa9.6□□□□□ -0.87
SEC61A1-205ENST00000483956 FAM222BQ8WU58 562 aa9.6□□□□□ -0.87
SEC61A1-205ENST00000483956 TECRQ9NZ01 308 aaKnown RBP9.6□□□□□ -0.87
SEC61A1-205ENST00000483956 COLQQ9Y215 455 aaPredicted RBP9.6□□□□□ -0.87
SEC61A1-205ENST00000483956 PI4KAP42356 2102 aa9.59□□□□□ -0.87
SEC61A1-205ENST00000483956 K7ESF4 209 aa9.59□□□□□ -0.87
SEC61A1-205ENST00000483956 CCL2P13500 99 aa9.59□□□□□ -0.87
SEC61A1-205ENST00000483956 RPL24P83731 157 aaKnown RBP9.59□□□□□ -0.87
SEC61A1-205ENST00000483956 MEF2CQ06413 473 aaPredicted RBP9.59□□□□□ -0.87
SEC61A1-205ENST00000483956 ZNF497Q6ZNH5 498 aa9.59□□□□□ -0.87
SEC61A1-205ENST00000483956 POM121L2Q96KW2 1035 aa9.59□□□□□ -0.87
SEC61A1-205ENST00000483956 AP1S3Q96PC3 154 aa9.59□□□□□ -0.87
SEC61A1-205ENST00000483956 TMEM70Q9BUB7 260 aa9.59□□□□□ -0.87
SEC61A1-205ENST00000483956 TTC28Q96AY4 2481 aa9.59□□□□□ -0.87
SEC61A1-205ENST00000483956 A0A096LPE4 126 aa9.59□□□□□ -0.87
SEC61A1-205ENST00000483956 A0A1W2PPZ6 126 aa9.59□□□□□ -0.87
SEC61A1-205ENST00000483956 ANKRD30BLA7E2S9 258 aa9.59□□□□□ -0.87
SEC61A1-205ENST00000483956 AGFG2O95081 481 aa9.59□□□□□ -0.87
SEC61A1-205ENST00000483956 AMY1AP04745 511 aa9.59□□□□□ -0.87
SEC61A1-205ENST00000483956 ARL14EPLP0DKL9 152 aa9.59□□□□□ -0.87
SEC61A1-205ENST00000483956 CRYBB3P26998 211 aa9.59□□□□□ -0.87
SEC61A1-205ENST00000483956 HIST1H1AQ02539 215 aaPredicted RBP9.59□□□□□ -0.87
SEC61A1-205ENST00000483956 OR2T6Q8NHC8 308 aa9.59□□□□□ -0.87
SEC61A1-205ENST00000483956 EAF1Q96JC9 268 aaPredicted RBP9.59□□□□□ -0.87
SEC61A1-205ENST00000483956 RNASE7Q9H1E1 156 aaKnown RBP9.59□□□□□ -0.87
SEC61A1-205ENST00000483956 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.58□□□□□ -0.88
SEC61A1-205ENST00000483956 TEX48A0A1B0GUV7 120 aa9.58□□□□□ -0.88
SEC61A1-205ENST00000483956 ZNF503-AS2A6NEH8 195 aa9.58□□□□□ -0.88
SEC61A1-205ENST00000483956 SH2D7A6NKC9 451 aaPredicted RBP9.58□□□□□ -0.88
SEC61A1-205ENST00000483956 NGFP01138 241 aa9.58□□□□□ -0.88
SEC61A1-205ENST00000483956 HLA-DQA1P01909 254 aa9.58□□□□□ -0.88
SEC61A1-205ENST00000483956 P0C879 139 aa9.58□□□□□ -0.88
SEC61A1-205ENST00000483956 ZNF16P17020 682 aaPredicted RBP9.58□□□□□ -0.88
SEC61A1-205ENST00000483956 GPR183P32249 361 aa9.58□□□□□ -0.88
SEC61A1-205ENST00000483956 FGFRL1Q8N441 504 aa9.58□□□□□ -0.88
SEC61A1-205ENST00000483956 OR2Z1Q8NG97 314 aa9.58□□□□□ -0.88
SEC61A1-205ENST00000483956 FAM216AQ8WUB2 273 aa9.58□□□□□ -0.88
SEC61A1-205ENST00000483956 PERPQ96FX8 193 aa9.58□□□□□ -0.88
SEC61A1-205ENST00000483956 ZNF576Q9H609 170 aa9.58□□□□□ -0.88
SEC61A1-205ENST00000483956 SCRT2Q9NQ03 307 aa9.58□□□□□ -0.88
SEC61A1-205ENST00000483956 DEPPQ9NTK1 212 aa9.58□□□□□ -0.88
SEC61A1-205ENST00000483956 CLCF1Q9UBD9 225 aa9.58□□□□□ -0.88
SEC61A1-205ENST00000483956 YTHDF2Q9Y5A9 579 aaKnown RBP9.58□□□□□ -0.88
SEC61A1-205ENST00000483956 ZDBF2Q9HCK1 2354 aa9.58□□□□□ -0.88
SEC61A1-205ENST00000483956 RRHO14718 337 aa9.58□□□□□ -0.88
SEC61A1-205ENST00000483956 SNAI2O43623 268 aa9.58□□□□□ -0.88
SEC61A1-205ENST00000483956 HSD52Q0P140 79 aa9.58□□□□□ -0.88
SEC61A1-205ENST00000483956 PET117Q6UWS5 81 aa9.58□□□□□ -0.88
SEC61A1-205ENST00000483956 DRAM1Q8N682 238 aa9.58□□□□□ -0.88
SEC61A1-205ENST00000483956 OR2D2Q9H210 308 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 132.1 ms