RNA–Protein interactions for RNA: ENST00000481048.5

LRCH3-216, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 536 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-216ENST00000481048 OR4S2Q8NH73 311 aa4.84□□□□□ -1.63
LRCH3-216ENST00000481048 OR4A5Q8NH83 315 aa4.84□□□□□ -1.63
LRCH3-216ENST00000481048 TMEM167AQ8TBQ9 72 aa4.84□□□□□ -1.63
LRCH3-216ENST00000481048 MARC2Q969Z3 335 aa4.84□□□□□ -1.63
LRCH3-216ENST00000481048 DAZAP1Q96EP5 407 aaKnown RBP4.84□□□□□ -1.63
LRCH3-216ENST00000481048 C5orf30Q96GV9 206 aa4.84□□□□□ -1.63
LRCH3-216ENST00000481048 CXorf58Q96LI9 332 aa4.84□□□□□ -1.63
LRCH3-216ENST00000481048 FYTTD1Q96QD9 318 aaKnown RBP4.84□□□□□ -1.63
LRCH3-216ENST00000481048 SRSF8Q9BRL6 282 aaKnown RBP4.84□□□□□ -1.63
LRCH3-216ENST00000481048 ST6GALNAC5Q9BVH7 336 aa4.84□□□□□ -1.63
LRCH3-216ENST00000481048 ATG5Q9H1Y0 275 aa4.84□□□□□ -1.63
LRCH3-216ENST00000481048 NDUFB11Q9NX14 153 aa4.84□□□□□ -1.63
LRCH3-216ENST00000481048 DNAH1Q9P2D7 4330 aa4.84□□□□□ -1.64
LRCH3-216ENST00000481048 STARD9Q9P2P6 4700 aa4.84□□□□□ -1.64
LRCH3-216ENST00000481048 SACSQ9NZJ4 4579 aa4.83□□□□□ -1.64
LRCH3-216ENST00000481048 A0A075B6Q4 140 aa4.83□□□□□ -1.64
LRCH3-216ENST00000481048 IGKV2D-30A0A075B6S6 120 aa4.83□□□□□ -1.64
LRCH3-216ENST00000481048 RBMY1BA6NDE4 496 aaKnown RBP4.83□□□□□ -1.64
LRCH3-216ENST00000481048 RBMY1EA6NEQ0 496 aaKnown RBP4.83□□□□□ -1.64
LRCH3-216ENST00000481048 A8MWP6 167 aa4.83□□□□□ -1.64
LRCH3-216ENST00000481048 TEX22C9J3V5 150 aa4.83□□□□□ -1.64
LRCH3-216ENST00000481048 CYB5BO43169 146 aa4.83□□□□□ -1.64
LRCH3-216ENST00000481048 OR2J3O76001 311 aa4.83□□□□□ -1.64
LRCH3-216ENST00000481048 OR2C1O95371 312 aa4.83□□□□□ -1.64
LRCH3-216ENST00000481048 PRH1P02810 166 aa4.83□□□□□ -1.64
LRCH3-216ENST00000481048 RBMY1DP0C7P1 496 aaKnown RBP4.83□□□□□ -1.64
LRCH3-216ENST00000481048 APELAP0DMC3 54 aa4.83□□□□□ -1.64
LRCH3-216ENST00000481048 CTRB1P17538 263 aa4.83□□□□□ -1.64
LRCH3-216ENST00000481048 FGF9P31371 208 aaPredicted RBP4.83□□□□□ -1.64
LRCH3-216ENST00000481048 RPL30P62888 115 aaKnown RBP4.83□□□□□ -1.64
LRCH3-216ENST00000481048 RPL8P62917 257 aaKnown RBP4.83□□□□□ -1.64
LRCH3-216ENST00000481048 EIF4EBP1Q13541 118 aaPredicted RBP4.83□□□□□ -1.64
LRCH3-216ENST00000481048 ZNF57Q68EA5 555 aaPredicted RBP4.83□□□□□ -1.64
LRCH3-216ENST00000481048 CTRB2Q6GPI1 263 aa4.83□□□□□ -1.64
LRCH3-216ENST00000481048 THOC7Q6I9Y2 204 aaKnown RBP4.83□□□□□ -1.64
LRCH3-216ENST00000481048 DEFB125Q8N687 156 aa4.83□□□□□ -1.64
LRCH3-216ENST00000481048 MAFIPQ8WZ33 124 aa4.83□□□□□ -1.64
LRCH3-216ENST00000481048 EEF1AKMT3Q96AZ1 226 aa4.83□□□□□ -1.64
LRCH3-216ENST00000481048 ATP6V0BQ99437 205 aa4.83□□□□□ -1.64
LRCH3-216ENST00000481048 SRD5A3Q9H8P0 318 aa4.83□□□□□ -1.64
LRCH3-216ENST00000481048 PLEKHA3Q9HB20 300 aa4.83□□□□□ -1.64
LRCH3-216ENST00000481048 GAR1Q9NY12 217 aaKnown RBP4.83□□□□□ -1.64
LRCH3-216ENST00000481048 BET1LQ9NYM9 111 aa4.83□□□□□ -1.64
LRCH3-216ENST00000481048 THYN1Q9P016 225 aa4.83□□□□□ -1.64
LRCH3-216ENST00000481048 IGKV1D-8A0A087WSZ0 117 aa4.82□□□□□ -1.64
LRCH3-216ENST00000481048 LOC102724200A0A096LPH7 203 aaPredicted RBP4.82□□□□□ -1.64
LRCH3-216ENST00000481048 A0A0A6YYH2 397 aa4.82□□□□□ -1.64
LRCH3-216ENST00000481048 HMX3A6NHT5 357 aa4.82□□□□□ -1.64
LRCH3-216ENST00000481048 A6NJ64 397 aa4.82□□□□□ -1.64
LRCH3-216ENST00000481048 PPP5D1E7EU14 171 aa4.82□□□□□ -1.64
LRCH3-216ENST00000481048 RBFOX2O43251 390 aaKnown RBP eCLIP4.82□□□□□ -1.642e-11■■■■□ 23
LRCH3-216ENST00000481048 CLEC3BP05452 202 aa4.82□□□□□ -1.64
LRCH3-216ENST00000481048 C8orf88P0DMB2 117 aa4.82□□□□□ -1.64
LRCH3-216ENST00000481048 DEFA4P12838 97 aa4.82□□□□□ -1.64
LRCH3-216ENST00000481048 MYOD1P15172 320 aa4.82□□□□□ -1.64
LRCH3-216ENST00000481048 NFYAP23511 347 aaPredicted RBP4.82□□□□□ -1.64
LRCH3-216ENST00000481048 ARL3P36405 182 aa4.82□□□□□ -1.64
LRCH3-216ENST00000481048 OR10A3P58181 314 aa4.82□□□□□ -1.64
LRCH3-216ENST00000481048 GNG2P59768 71 aa4.82□□□□□ -1.64
LRCH3-216ENST00000481048 ARPC4P59998 168 aa4.82□□□□□ -1.64
LRCH3-216ENST00000481048 DEFA5Q01523 94 aa4.82□□□□□ -1.64
LRCH3-216ENST00000481048 POU2AF1Q16633 256 aa4.82□□□□□ -1.64
LRCH3-216ENST00000481048 GUCA2BQ16661 112 aa4.82□□□□□ -1.64
LRCH3-216ENST00000481048 CLEC19AQ6UXS0 136 aa4.82□□□□□ -1.64
LRCH3-216ENST00000481048 HSD17B13Q7Z5P4 300 aaPredicted RBP4.82□□□□□ -1.64
LRCH3-216ENST00000481048 CADM3Q8N126 398 aa4.82□□□□□ -1.64
LRCH3-216ENST00000481048 UXS1Q8NBZ7 420 aa4.82□□□□□ -1.64
LRCH3-216ENST00000481048 CD300LFQ8TDQ1 290 aa4.82□□□□□ -1.64
LRCH3-216ENST00000481048 TCTEX1D2Q8WW35 142 aa4.82□□□□□ -1.64
LRCH3-216ENST00000481048 BORCS5Q969J3 196 aa4.82□□□□□ -1.64
LRCH3-216ENST00000481048 MRPL27Q9P0M9 148 aaKnown RBP4.82□□□□□ -1.64
LRCH3-216ENST00000481048 ANXA10Q9UJ72 324 aa4.82□□□□□ -1.64
LRCH3-216ENST00000481048 SPATA2Q9UM82 520 aa4.82□□□□□ -1.64
LRCH3-216ENST00000481048 TP53TG1Q9Y2A0 90 aa4.82□□□□□ -1.64
LRCH3-216ENST00000481048 RYR2Q92736 4967 aa4.82□□□□□ -1.64
LRCH3-216ENST00000481048 IGLV11-55A0A075B6I3 123 aa4.81□□□□□ -1.64
LRCH3-216ENST00000481048 IGKV1D-13A0A0B4J2D9 117 aa4.81□□□□□ -1.64
LRCH3-216ENST00000481048 KIR2DL5BA0A0G2JN68 375 aa4.81□□□□□ -1.64
LRCH3-216ENST00000481048 KIR2DL5BA0A0G2JPC4 375 aa4.81□□□□□ -1.64
LRCH3-216ENST00000481048 ZNF320A2RRD8 509 aa4.81□□□□□ -1.64
LRCH3-216ENST00000481048 TMEM213A2RRL7 107 aa4.81□□□□□ -1.64
LRCH3-216ENST00000481048 E7EUB6 86 aa4.81□□□□□ -1.64
LRCH3-216ENST00000481048 J3QRK9 145 aa4.81□□□□□ -1.64
LRCH3-216ENST00000481048 UBE2CO00762 179 aa4.81□□□□□ -1.64
LRCH3-216ENST00000481048 NDUFB8O95169 186 aa4.81□□□□□ -1.64
LRCH3-216ENST00000481048 HPRT1P00492 218 aa4.81□□□□□ -1.64
LRCH3-216ENST00000481048 IGKV1-13P0DP09 117 aa4.81□□□□□ -1.64
LRCH3-216ENST00000481048 NQO2P16083 231 aa4.81□□□□□ -1.64
LRCH3-216ENST00000481048 HLA-GP17693 338 aa4.81□□□□□ -1.64
LRCH3-216ENST00000481048 PTBP1P26599 531 aaKnown RBP eCLIP4.81□□□□□ -1.64
LRCH3-216ENST00000481048 BRWD1-AS2P59051 145 aa4.81□□□□□ -1.64
LRCH3-216ENST00000481048 TAS2R31P59538 309 aa4.81□□□□□ -1.64
LRCH3-216ENST00000481048 GABARAPL2P60520 117 aa4.81□□□□□ -1.64
LRCH3-216ENST00000481048 CATR1Q13166 79 aa4.81□□□□□ -1.64
LRCH3-216ENST00000481048 C10orf55Q5SWW7 151 aa4.81□□□□□ -1.64
LRCH3-216ENST00000481048 UBE2UQ5VVX9 321 aa4.81□□□□□ -1.64
LRCH3-216ENST00000481048 C22orf42Q6IC83 251 aa4.81□□□□□ -1.64
LRCH3-216ENST00000481048 SPSB3Q6PJ21 355 aa4.81□□□□□ -1.64
LRCH3-216ENST00000481048 RBPMS2Q6ZRY4 209 aaKnown RBP4.81□□□□□ -1.64
LRCH3-216ENST00000481048 Q6ZWC4 215 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms