RNA–Protein interactions for RNA: ENST00000479868.6

SEC13-216, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC13, Length 2,374 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-216ENST00000479868 MALRD1Q5VYJ5 2156 aa10.58□□□□□ -0.72
SEC13-216ENST00000479868 PCP4L1A6NKN8 68 aa10.58□□□□□ -0.72
SEC13-216ENST00000479868 RAB5BP61020 215 aa10.58□□□□□ -0.72
SEC13-216ENST00000479868 OSR1Q8TAX0 266 aaPredicted RBP10.58□□□□□ -0.72
SEC13-216ENST00000479868 ZNF596Q8TC21 504 aa10.58□□□□□ -0.72
SEC13-216ENST00000479868 PLEKHA3Q9HB20 300 aa10.58□□□□□ -0.72
SEC13-216ENST00000479868 SDF2L1Q9HCN8 221 aa10.58□□□□□ -0.72
SEC13-216ENST00000479868 NPVFQ9HCQ7 196 aa10.58□□□□□ -0.72
SEC13-216ENST00000479868 PXMP4Q9Y6I8 212 aa10.58□□□□□ -0.72
SEC13-216ENST00000479868 C1orf196B1AJZ1 125 aa10.57□□□□□ -0.72
SEC13-216ENST00000479868 PAGE4O60829 102 aa10.57□□□□□ -0.72
SEC13-216ENST00000479868 AGAP20933 346 aa10.57□□□□□ -0.72
SEC13-216ENST00000479868 MAS1LP35410 378 aa10.57□□□□□ -0.72
SEC13-216ENST00000479868 ZNF672Q499Z4 452 aaPredicted RBP10.57□□□□□ -0.72
SEC13-216ENST00000479868 LINC00311Q8N616 119 aa10.57□□□□□ -0.72
SEC13-216ENST00000479868 SSMEM1Q8WWF3 244 aa10.57□□□□□ -0.72
SEC13-216ENST00000479868 ST6GALNAC6Q969X2 333 aa10.57□□□□□ -0.72
SEC13-216ENST00000479868 MANBALQ9NQG1 85 aa10.57□□□□□ -0.72
SEC13-216ENST00000479868 BIN3Q9NQY0 253 aa10.57□□□□□ -0.72
SEC13-216ENST00000479868 URGCP-MRPS24S4R325 110 aa10.57□□□□□ -0.72
SEC13-216ENST00000479868 IGHV1-8P0DP01 117 aa10.57□□□□□ -0.72
SEC13-216ENST00000479868 TMEM177Q53S58 311 aa10.57□□□□□ -0.72
SEC13-216ENST00000479868 C8orf31Q8N9H6 132 aa10.57□□□□□ -0.72
SEC13-216ENST00000479868 OR10W1Q8NGF6 305 aa10.57□□□□□ -0.72
SEC13-216ENST00000479868 NABP2Q9BQ15 211 aa10.57□□□□□ -0.72
SEC13-216ENST00000479868 A0A087X0M5 115 aa10.56□□□□□ -0.72
SEC13-216ENST00000479868 A0A1B0GX30 115 aa10.56□□□□□ -0.72
SEC13-216ENST00000479868 DLX1P56177 255 aa10.56□□□□□ -0.72
SEC13-216ENST00000479868 PNRC1Q12796 327 aaPredicted RBP10.56□□□□□ -0.72
SEC13-216ENST00000479868 ELOBQ15370 118 aa10.56□□□□□ -0.72
SEC13-216ENST00000479868 ZNF674Q2M3X9 581 aa10.56□□□□□ -0.72
SEC13-216ENST00000479868 TEPPQ6URK8 271 aa10.56□□□□□ -0.72
SEC13-216ENST00000479868 OR4F5Q8NH21 305 aa10.56□□□□□ -0.72
SEC13-216ENST00000479868 Q8WTZ3 238 aa10.56□□□□□ -0.72
SEC13-216ENST00000479868 RAB1CQ92928 201 aa10.56□□□□□ -0.72
SEC13-216ENST00000479868 TMEM186Q96B77 213 aa10.56□□□□□ -0.72
SEC13-216ENST00000479868 RPUSD4Q96CM3 377 aaKnown RBP10.56□□□□□ -0.72
SEC13-216ENST00000479868 FLYWCH2Q96CP2 140 aaKnown RBP10.56□□□□□ -0.72
SEC13-216ENST00000479868 FAM122AQ96E09 287 aa10.56□□□□□ -0.72
SEC13-216ENST00000479868 OR4F4Q96R69 305 aa10.56□□□□□ -0.72
SEC13-216ENST00000479868 SMIM7Q9BQ49 75 aa10.56□□□□□ -0.72
SEC13-216ENST00000479868 KLF2Q9Y5W3 355 aaPredicted RBP10.56□□□□□ -0.72
SEC13-216ENST00000479868 A0A1W2PPV4 95 aa10.55□□□□□ -0.72
SEC13-216ENST00000479868 B4DEV8 164 aa10.55□□□□□ -0.72
SEC13-216ENST00000479868 MOB3BQ86TA1 216 aa10.55□□□□□ -0.72
SEC13-216ENST00000479868 OR5B3Q8NH48 314 aa10.55□□□□□ -0.72
SEC13-216ENST00000479868 OR9G1Q8NH87 305 aa10.55□□□□□ -0.72
SEC13-216ENST00000479868 MALSU1Q96EH3 234 aa10.55□□□□□ -0.72
SEC13-216ENST00000479868 SIRT7Q9NRC8 400 aa10.55□□□□□ -0.72
SEC13-216ENST00000479868 ITPR1Q14643 2758 aa10.55□□□□□ -0.72
SEC13-216ENST00000479868 E7EUB6 86 aa10.55□□□□□ -0.72
SEC13-216ENST00000479868 TMEM250H0YL14 139 aa10.55□□□□□ -0.72
SEC13-216ENST00000479868 PLXNB1O43157 2135 aa10.55□□□□□ -0.72
SEC13-216ENST00000479868 SOX15O60248 233 aa10.55□□□□□ -0.72
SEC13-216ENST00000479868 CXCL1P09341 107 aa10.55□□□□□ -0.72
SEC13-216ENST00000479868 S100A12P80511 92 aa10.55□□□□□ -0.72
SEC13-216ENST00000479868 PRB3Q04118 309 aaPredicted RBP10.55□□□□□ -0.72
SEC13-216ENST00000479868 ANKRD39Q53RE8 183 aa10.55□□□□□ -0.72
SEC13-216ENST00000479868 FAM71F2Q6NXP2 309 aa10.55□□□□□ -0.72
SEC13-216ENST00000479868 ZNF841Q6ZN19 808 aa10.55□□□□□ -0.72
SEC13-216ENST00000479868 OR4C13Q8NGP0 309 aa10.55□□□□□ -0.72
SEC13-216ENST00000479868 FKBP11Q9NYL4 201 aa10.55□□□□□ -0.72
SEC13-216ENST00000479868 RALYQ9UKM9 306 aaKnown RBP10.55□□□□□ -0.72
SEC13-216ENST00000479868 NAV3Q8IVL0 2385 aa10.55□□□□□ -0.72
SEC13-216ENST00000479868 C1QTNF9P0C862 333 aa10.54□□□□□ -0.72
SEC13-216ENST00000479868 IGFBP2P18065 325 aa10.54□□□□□ -0.72
SEC13-216ENST00000479868 ZNF137PP52743 207 aa10.54□□□□□ -0.72
SEC13-216ENST00000479868 SNRPEP62304 92 aaKnown RBP10.54□□□□□ -0.72
SEC13-216ENST00000479868 RPL8P62917 257 aaKnown RBP10.54□□□□□ -0.72
SEC13-216ENST00000479868 RELQ04864 619 aaPredicted RBP10.54□□□□□ -0.72
SEC13-216ENST00000479868 PDPNQ86YL7 162 aa10.54□□□□□ -0.72
SEC13-216ENST00000479868 STPG3Q8N7X2 389 aa10.54□□□□□ -0.72
SEC13-216ENST00000479868 TMEM133Q9H2Q1 129 aa10.54□□□□□ -0.72
SEC13-216ENST00000479868 PARLQ9H300 379 aa10.54□□□□□ -0.72
SEC13-216ENST00000479868 SPTBN1Q01082 2364 aaKnown RBP10.54□□□□□ -0.72
SEC13-216ENST00000479868 CXorf65A6NEN9 183 aa10.54□□□□□ -0.72
SEC13-216ENST00000479868 C11orf94C9JXX5 98 aa10.54□□□□□ -0.72
SEC13-216ENST00000479868 IGLV2-23P01705 113 aa10.54□□□□□ -0.72
SEC13-216ENST00000479868 IGHV2-70P01814 119 aa10.54□□□□□ -0.72
SEC13-216ENST00000479868 ARL14EPLP0DKL9 152 aa10.54□□□□□ -0.72
SEC13-216ENST00000479868 UBE2G2P60604 165 aa10.54□□□□□ -0.72
SEC13-216ENST00000479868 BSXQ3C1V8 233 aa10.54□□□□□ -0.72
SEC13-216ENST00000479868 CYP2G1PQ6ZSU1 146 aa10.54□□□□□ -0.72
SEC13-216ENST00000479868 TGIF2LXQ8IUE1 241 aa10.54□□□□□ -0.72
SEC13-216ENST00000479868 ABHD5Q8WTS1 349 aa10.54□□□□□ -0.72
SEC13-216ENST00000479868 COMMD5Q9GZQ3 224 aa10.54□□□□□ -0.72
SEC13-216ENST00000479868 NDUFA4L2Q9NRX3 87 aa10.54□□□□□ -0.72
SEC13-216ENST00000479868 TRBV23-1A0A0A0MS06 115 aa10.53□□□□□ -0.72
SEC13-216ENST00000479868 TGIF2-C20orf24A0A0A6YYL0 155 aa10.53□□□□□ -0.72
SEC13-216ENST00000479868 LY6HO94772 140 aa10.53□□□□□ -0.72
SEC13-216ENST00000479868 RNASE2P10153 161 aaKnown RBP10.53□□□□□ -0.72
SEC13-216ENST00000479868 RPL35P42766 123 aaKnown RBP10.53□□□□□ -0.72
SEC13-216ENST00000479868 AKR1D1P51857 326 aa10.53□□□□□ -0.72
SEC13-216ENST00000479868 TMEM249Q2WGJ8 235 aa10.53□□□□□ -0.72
SEC13-216ENST00000479868 RITA1Q96K30 269 aa10.53□□□□□ -0.72
SEC13-216ENST00000479868 SSX3Q99909 188 aa10.53□□□□□ -0.72
SEC13-216ENST00000479868 TMEM204Q9BSN7 226 aa10.53□□□□□ -0.72
SEC13-216ENST00000479868 SEPSECSQ9HD40 501 aaKnown RBP10.53□□□□□ -0.72
SEC13-216ENST00000479868 NAT8Q9UHE5 227 aa10.53□□□□□ -0.72
SEC13-216ENST00000479868 WASHC3Q9Y3C0 194 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms