RNA–Protein interactions for RNA: ENST00000479135.5

EWSR1-216, Transcript of EWS RNA binding protein 1, humanhuman

TSL 1 (best)

Gene EWSR1, Length 7,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-216ENST00000479135 F8VWA3 439 aa9.37□□□□□ -0.91
EWSR1-216ENST00000479135 MRPS21P82921 87 aaKnown RBP9.37□□□□□ -0.91
EWSR1-216ENST00000479135 TMEM144Q7Z5S9 345 aa9.37□□□□□ -0.91
EWSR1-216ENST00000479135 HOGA1Q86XE5 327 aa9.37□□□□□ -0.91
EWSR1-216ENST00000479135 STPG2Q8N412 459 aa9.37□□□□□ -0.91
EWSR1-216ENST00000479135 CACNA1CQ13936 2221 aa9.37□□□□□ -0.91
EWSR1-216ENST00000479135 MLNRO43193 412 aa9.37□□□□□ -0.91
EWSR1-216ENST00000479135 CFHR3Q02985 330 aa9.37□□□□□ -0.91
EWSR1-216ENST00000479135 DNAJC30Q96LL9 226 aa9.37□□□□□ -0.91
EWSR1-216ENST00000479135 YBX2Q9Y2T7 364 aaKnown RBP9.37□□□□□ -0.91
EWSR1-216ENST00000479135 PEX11BO96011 259 aa9.37□□□□□ -0.91
EWSR1-216ENST00000479135 IGHG4P01861 327 aa9.37□□□□□ -0.91
EWSR1-216ENST00000479135 FKBP2P26885 142 aaKnown RBP9.37□□□□□ -0.91
EWSR1-216ENST00000479135 MRGPRX1Q96LB2 322 aa9.37□□□□□ -0.91
EWSR1-216ENST00000479135 TCRBV5S1A1TA0A578 114 aa9.37□□□□□ -0.91
EWSR1-216ENST00000479135 NDUFS6O75380 124 aaKnown RBP9.37□□□□□ -0.91
EWSR1-216ENST00000479135 PMVKQ15126 192 aa9.37□□□□□ -0.91
EWSR1-216ENST00000479135 ATP5L2Q7Z4Y8 100 aa9.37□□□□□ -0.91
EWSR1-216ENST00000479135 KCNK17Q96T54 332 aa9.37□□□□□ -0.91
EWSR1-216ENST00000479135 KLK13Q9UKR3 277 aa9.37□□□□□ -0.91
EWSR1-216ENST00000479135 HIGD1CA8MV81 97 aa9.37□□□□□ -0.91
EWSR1-216ENST00000479135 NXPH4O95158 308 aa9.37□□□□□ -0.91
EWSR1-216ENST00000479135 CRYBA4P53673 196 aa9.37□□□□□ -0.91
EWSR1-216ENST00000479135 YPEL5P62699 121 aa9.37□□□□□ -0.91
EWSR1-216ENST00000479135 ZNF658BQ4V348 819 aaPredicted RBP9.37□□□□□ -0.91
EWSR1-216ENST00000479135 WFDC11Q8NEX6 87 aa9.37□□□□□ -0.91
EWSR1-216ENST00000479135 GATA2P23769 480 aaPredicted RBP9.37□□□□□ -0.91
EWSR1-216ENST00000479135 GLIPR1P48060 266 aa9.37□□□□□ -0.91
EWSR1-216ENST00000479135 RPL8P62917 257 aaKnown RBP9.36□□□□□ -0.91
EWSR1-216ENST00000479135 DSCR8Q96T75 97 aa9.36□□□□□ -0.91
EWSR1-216ENST00000479135 LINC00477Q96M19 166 aa9.36□□□□□ -0.91
EWSR1-216ENST00000479135 ASCL2Q99929 193 aa9.36□□□□□ -0.91
EWSR1-216ENST00000479135 C8orf88P0DMB2 117 aa9.36□□□□□ -0.91
EWSR1-216ENST00000479135 PPICP45877 212 aa9.36□□□□□ -0.91
EWSR1-216ENST00000479135 FOXG1P55316 489 aaPredicted RBP9.36□□□□□ -0.91
EWSR1-216ENST00000479135 CLDND2Q8NHS1 167 aa9.36□□□□□ -0.91
EWSR1-216ENST00000479135 ABCA7Q8IZY2 2146 aa9.36□□□□□ -0.91
EWSR1-216ENST00000479135 SCN3AQ9NY46 2000 aa9.36□□□□□ -0.91
EWSR1-216ENST00000479135 MORN3Q6PF18 240 aaPredicted RBP9.36□□□□□ -0.91
EWSR1-216ENST00000479135 TIMM17AQ99595 171 aa9.36□□□□□ -0.91
EWSR1-216ENST00000479135 KIR3DX1Q9H7L2 352 aa9.36□□□□□ -0.91
EWSR1-216ENST00000479135 IGHG2P01859 326 aa9.36□□□□□ -0.91
EWSR1-216ENST00000479135 DUX4L9Q6RFH8 374 aaPredicted RBP9.36□□□□□ -0.91
EWSR1-216ENST00000479135 TAF15Q92804 592 aaKnown RBP eCLIP9.36□□□□□ -0.91
EWSR1-216ENST00000479135 SLC50A1Q9BRV3 221 aa9.36□□□□□ -0.91
EWSR1-216ENST00000479135 SF3B6Q9Y3B4 125 aaKnown RBP9.36□□□□□ -0.91
EWSR1-216ENST00000479135 SERF2P84101 59 aa9.36□□□□□ -0.91
EWSR1-216ENST00000479135 SIGLEC9Q9Y336 463 aa9.36□□□□□ -0.91
EWSR1-216ENST00000479135 CDCP2Q5VXM1 449 aa9.35□□□□□ -0.91
EWSR1-216ENST00000479135 TMEM243Q9BU79 118 aa9.35□□□□□ -0.91
EWSR1-216ENST00000479135 USP54Q70EL1 1684 aa9.35□□□□□ -0.91
EWSR1-216ENST00000479135 ADAMTS7Q9UKP4 1686 aa9.35□□□□□ -0.91
EWSR1-216ENST00000479135 SRSF1Q07955 248 aaKnown RBP eCLIP9.35□□□□□ -0.914e-9■■■□□ 18.9
EWSR1-216ENST00000479135 FGF22Q9HCT0 170 aa9.35□□□□□ -0.91
EWSR1-216ENST00000479135 TMEFF2Q9UIK5 374 aaPredicted RBP9.35□□□□□ -0.91
EWSR1-216ENST00000479135 FAM90A20PA6NIJ5 464 aa9.35□□□□□ -0.91
EWSR1-216ENST00000479135 ATP5G3P48201 142 aa9.34□□□□□ -0.91
EWSR1-216ENST00000479135 LYPD6Q86Y78 171 aa9.34□□□□□ -0.91
EWSR1-216ENST00000479135 COL2A1P02458 1487 aaPredicted RBP9.34□□□□□ -0.91
EWSR1-216ENST00000479135 CRLF1O75462 422 aa9.34□□□□□ -0.91
EWSR1-216ENST00000479135 ERVK11-1P61568 191 aa9.34□□□□□ -0.91
EWSR1-216ENST00000479135 WDYHV1Q96HA8 205 aa9.34□□□□□ -0.91
EWSR1-216ENST00000479135 ARHGEF17Q96PE2 2063 aaPredicted RBP9.34□□□□□ -0.91
EWSR1-216ENST00000479135 A0A1B0GUT8 65 aa9.34□□□□□ -0.91
EWSR1-216ENST00000479135 OR13A1Q8NGR1 328 aa9.34□□□□□ -0.91
EWSR1-216ENST00000479135 PDLIM5Q96HC4 596 aaKnown RBP9.34□□□□□ -0.91
EWSR1-216ENST00000479135 HS3ST3B1Q9Y662 390 aa9.34□□□□□ -0.91
EWSR1-216ENST00000479135 ID3Q02535 119 aa9.34□□□□□ -0.91
EWSR1-216ENST00000479135 CLPSL2Q6UWE3 100 aa9.34□□□□□ -0.91
EWSR1-216ENST00000479135 ZNF645Q8N7E2 425 aa9.34□□□□□ -0.91
EWSR1-216ENST00000479135 A0A1B0GWJ7 208 aa9.34□□□□□ -0.91
EWSR1-216ENST00000479135 UBL5Q9BZL1 73 aa9.34□□□□□ -0.91
EWSR1-216ENST00000479135 PARP4Q9UKK3 1724 aaKnown RBP9.34□□□□□ -0.91
EWSR1-216ENST00000479135 GLULP15104 373 aa9.34□□□□□ -0.91
EWSR1-216ENST00000479135 GCHFRP30047 84 aa9.34□□□□□ -0.91
EWSR1-216ENST00000479135 TMEM211Q6ICI0 200 aa9.34□□□□□ -0.91
EWSR1-216ENST00000479135 CCL19Q99731 98 aa9.34□□□□□ -0.91
EWSR1-216ENST00000479135 RBM38Q9H0Z9 239 aaKnown RBP9.34□□□□□ -0.91
EWSR1-216ENST00000479135 NUP188Q5SRE5 1749 aa9.34□□□□□ -0.91
EWSR1-216ENST00000479135 LTN1O94822 1766 aa9.33□□□□□ -0.92
EWSR1-216ENST00000479135 THBDP07204 575 aa9.33□□□□□ -0.92
EWSR1-216ENST00000479135 TFF3Q07654 80 aa9.33□□□□□ -0.92
EWSR1-216ENST00000479135 ZXDCQ2QGD7 858 aaPredicted RBP9.33□□□□□ -0.92
EWSR1-216ENST00000479135 SCRT2Q9NQ03 307 aa9.33□□□□□ -0.92
EWSR1-216ENST00000479135 SELLP14151 372 aa9.33□□□□□ -0.92
EWSR1-216ENST00000479135 SMIM2Q9BVW6 85 aa9.33□□□□□ -0.92
EWSR1-216ENST00000479135 IL36BQ9NZH7 164 aa9.33□□□□□ -0.92
EWSR1-216ENST00000479135 A0A0A6YYD4 124 aa9.33□□□□□ -0.92
EWSR1-216ENST00000479135 FGF9P31371 208 aaPredicted RBP9.33□□□□□ -0.92
EWSR1-216ENST00000479135 ACTL10Q5JWF8 245 aa9.33□□□□□ -0.92
EWSR1-216ENST00000479135 RPL36A-HNRNPH2H7BZ11 118 aa9.33□□□□□ -0.92
EWSR1-216ENST00000479135 UPK3AO75631 287 aa9.33□□□□□ -0.92
EWSR1-216ENST00000479135 KIR3DS1Q14943 382 aa9.33□□□□□ -0.92
EWSR1-216ENST00000479135 PPP1R27Q86WC6 154 aa9.33□□□□□ -0.92
EWSR1-216ENST00000479135 RFLNBQ8N5W9 214 aa9.33□□□□□ -0.92
EWSR1-216ENST00000479135 C1QL4Q86Z23 238 aa9.33□□□□□ -0.92
EWSR1-216ENST00000479135 IGKV6-21A0A0C4DH24 114 aa9.33□□□□□ -0.92
EWSR1-216ENST00000479135 GUSBP1Q15486 140 aa9.33□□□□□ -0.92
EWSR1-216ENST00000479135 MARCH11A6NNE9 402 aa9.32□□□□□ -0.92
EWSR1-216ENST00000479135 SLIRPQ9GZT3 109 aaKnown RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms