RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 SMIM4Q8WVI0 70 aa2.79□□□□□ -1.96
UBR3-209ENST00000477461 ARL11Q969Q4 196 aa2.79□□□□□ -1.96
UBR3-209ENST00000477461 TMEM186Q96B77 213 aa2.79□□□□□ -1.96
UBR3-209ENST00000477461 COQ2Q96H96 371 aa2.79□□□□□ -1.96
UBR3-209ENST00000477461 ZNF714Q96N38 554 aa2.79□□□□□ -1.96
UBR3-209ENST00000477461 GINS4Q9BRT9 223 aa2.79□□□□□ -1.96
UBR3-209ENST00000477461 HDHD3Q9BSH5 251 aaPredicted RBP2.79□□□□□ -1.96
UBR3-209ENST00000477461 GAL3ST2Q9H3Q3 398 aa2.79□□□□□ -1.96
UBR3-209ENST00000477461 NCOR1P1Q9H4R4 102 aa2.79□□□□□ -1.96
UBR3-209ENST00000477461 LPAR2Q9HBW0 351 aa2.79□□□□□ -1.96
UBR3-209ENST00000477461 TAS2R8Q9NYW2 309 aa2.79□□□□□ -1.96
UBR3-209ENST00000477461 TAS2R3Q9NYW6 316 aa2.79□□□□□ -1.96
UBR3-209ENST00000477461 DPM3Q9P2X0 92 aa2.79□□□□□ -1.96
UBR3-209ENST00000477461 ONECUT1Q9UBC0 465 aa2.79□□□□□ -1.96
UBR3-209ENST00000477461 DUX4Q9UBX2 424 aa2.79□□□□□ -1.96
UBR3-209ENST00000477461 STRAPQ9Y3F4 350 aaKnown RBP2.79□□□□□ -1.96
UBR3-209ENST00000477461 LINC00312Q9Y6C7 94 aa2.79□□□□□ -1.96
UBR3-209ENST00000477461 V9GYH0 126 aa2.79□□□□□ -1.96
UBR3-209ENST00000477461 ARHGAP32A7KAX9 2087 aa2.79□□□□□ -1.96
UBR3-209ENST00000477461 LAMA5O15230 3695 aa2.79□□□□□ -1.96
UBR3-209ENST00000477461 CR1P17927 2039 aa2.78□□□□□ -1.96
UBR3-209ENST00000477461 TRBV6-6A0A0A6YYG2 114 aa2.78□□□□□ -1.96
UBR3-209ENST00000477461 TRAV39A0A0B4J263 110 aa2.78□□□□□ -1.96
UBR3-209ENST00000477461 IGHV2-70DA0A0C4DH43 119 aa2.78□□□□□ -1.96
UBR3-209ENST00000477461 A0A0U1RRA0 63 aa2.78□□□□□ -1.96
UBR3-209ENST00000477461 KBTBD11-OT1A0A1B0GTJ5 212 aa2.78□□□□□ -1.96
UBR3-209ENST00000477461 LINC00854A0A1B0GVQ3 168 aa2.78□□□□□ -1.96
UBR3-209ENST00000477461 TMEM89A2RUT3 159 aa2.78□□□□□ -1.96
UBR3-209ENST00000477461 NAP1L6A6NFF2 107 aa2.78□□□□□ -1.96
UBR3-209ENST00000477461 CENPXA8MT69 81 aa2.78□□□□□ -1.96
UBR3-209ENST00000477461 ZNF736B4DX44 427 aaPredicted RBP2.78□□□□□ -1.96
UBR3-209ENST00000477461 TRDCB7Z8K6 153 aa2.78□□□□□ -1.96
UBR3-209ENST00000477461 DISC1C4P0D8 188 aa2.78□□□□□ -1.96
UBR3-209ENST00000477461 J3QRK9 145 aa2.78□□□□□ -1.96
UBR3-209ENST00000477461 SDCBPO00560 298 aaPredicted RBP2.78□□□□□ -1.96
UBR3-209ENST00000477461 TOR1AO14656 332 aa2.78□□□□□ -1.96
UBR3-209ENST00000477461 BET1O15155 118 aa2.78□□□□□ -1.96
UBR3-209ENST00000477461 FABP7O15540 132 aa2.78□□□□□ -1.96
UBR3-209ENST00000477461 GSTZ1O43708 216 aaPredicted RBP2.78□□□□□ -1.96
UBR3-209ENST00000477461 ORC5O43913 435 aa2.78□□□□□ -1.96
UBR3-209ENST00000477461 SSX5O60225 188 aa2.78□□□□□ -1.96
UBR3-209ENST00000477461 DUSP14O95147 198 aaKnown RBP2.78□□□□□ -1.96
UBR3-209ENST00000477461 DIRAS3O95661 229 aa2.78□□□□□ -1.96
UBR3-209ENST00000477461 RAB3DO95716 219 aa2.78□□□□□ -1.96
UBR3-209ENST00000477461 TGFAP01135 160 aa2.78□□□□□ -1.96
UBR3-209ENST00000477461 HBZP02008 142 aa2.78□□□□□ -1.96
UBR3-209ENST00000477461 MSMBP08118 114 aa2.78□□□□□ -1.96
UBR3-209ENST00000477461 AKAIN1P0CW23 69 aa2.78□□□□□ -1.96
UBR3-209ENST00000477461 ZNF728P0DKX0 622 aa2.78□□□□□ -1.96
UBR3-209ENST00000477461 RCC1P18754 421 aaPredicted RBP2.78□□□□□ -1.96
UBR3-209ENST00000477461 TBPP20226 339 aa2.78□□□□□ -1.96
UBR3-209ENST00000477461 NFYBP25208 207 aa2.78□□□□□ -1.96
UBR3-209ENST00000477461 HLA-DMAP28067 261 aa2.78□□□□□ -1.96
UBR3-209ENST00000477461 TAS2R19P59542 299 aa2.78□□□□□ -1.96
UBR3-209ENST00000477461 DEFA1P59665 94 aa2.78□□□□□ -1.96
UBR3-209ENST00000477461 DEFA3P59666 94 aa2.78□□□□□ -1.96
UBR3-209ENST00000477461 TSPAN5P62079 268 aa2.78□□□□□ -1.96
UBR3-209ENST00000477461 ARF6P62330 175 aa2.78□□□□□ -1.96
UBR3-209ENST00000477461 PAX5Q02548 391 aa2.78□□□□□ -1.96
UBR3-209ENST00000477461 CDK10Q15131 360 aa2.78□□□□□ -1.96
UBR3-209ENST00000477461 LTC4SQ16873 150 aa2.78□□□□□ -1.96
UBR3-209ENST00000477461 TMEM249Q2WGJ8 235 aa2.78□□□□□ -1.96
UBR3-209ENST00000477461 RNASE10Q5GAN6 216 aaKnown RBP2.78□□□□□ -1.96
UBR3-209ENST00000477461 METTL11BQ5VVY1 283 aa2.78□□□□□ -1.96
UBR3-209ENST00000477461 OR52W1Q6IF63 320 aa2.78□□□□□ -1.96
UBR3-209ENST00000477461 TEX29Q8N6K0 151 aa2.78□□□□□ -1.96
UBR3-209ENST00000477461 TMEM229BQ8NBD8 167 aa2.78□□□□□ -1.96
UBR3-209ENST00000477461 WFDC11Q8NEX6 87 aa2.78□□□□□ -1.96
UBR3-209ENST00000477461 OR10A7Q8NGE5 316 aa2.78□□□□□ -1.96
UBR3-209ENST00000477461 OR4A4PQ8NGN8 299 aa2.78□□□□□ -1.96
UBR3-209ENST00000477461 OR1L1Q8NH94 360 aa2.78□□□□□ -1.96
UBR3-209ENST00000477461 OR10J5Q8NHC4 309 aa2.78□□□□□ -1.96
UBR3-209ENST00000477461 RFESDQ8TAC1 157 aa2.78□□□□□ -1.96
UBR3-209ENST00000477461 UBALD1Q8TB05 177 aa2.78□□□□□ -1.96
UBR3-209ENST00000477461 IL1F10Q8WWZ1 152 aa2.78□□□□□ -1.96
UBR3-209ENST00000477461 MAFIPQ8WZ33 124 aa2.78□□□□□ -1.96
UBR3-209ENST00000477461 BORCS5Q969J3 196 aa2.78□□□□□ -1.96
UBR3-209ENST00000477461 GALMQ96C23 342 aa2.78□□□□□ -1.96
UBR3-209ENST00000477461 C7orf50Q9BRJ6 194 aaKnown RBP2.78□□□□□ -1.96
UBR3-209ENST00000477461 CCDC32Q9BV29 185 aa2.78□□□□□ -1.96
UBR3-209ENST00000477461 SRRQ9GZT4 340 aa2.78□□□□□ -1.96
UBR3-209ENST00000477461 SIRPDQ9H106 197 aa2.78□□□□□ -1.96
UBR3-209ENST00000477461 TAF9BQ9HBM6 251 aa2.78□□□□□ -1.96
UBR3-209ENST00000477461 C19orf12Q9NSK7 152 aa2.78□□□□□ -1.96
UBR3-209ENST00000477461 NECAP2Q9NVZ3 263 aa2.78□□□□□ -1.96
UBR3-209ENST00000477461 MCUBQ9NWR8 336 aa2.78□□□□□ -1.96
UBR3-209ENST00000477461 CALYQ9NYX4 217 aa2.78□□□□□ -1.96
UBR3-209ENST00000477461 IDI2-AS1Q9NZ38 188 aa2.78□□□□□ -1.96
UBR3-209ENST00000477461 EHFQ9NZC4 300 aa2.78□□□□□ -1.96
UBR3-209ENST00000477461 GNG12Q9UBI6 72 aa2.78□□□□□ -1.96
UBR3-209ENST00000477461 MTFP1Q9UDX5 166 aa2.78□□□□□ -1.96
UBR3-209ENST00000477461 OPN4Q9UHM6 478 aa2.78□□□□□ -1.96
UBR3-209ENST00000477461 ZNF230Q9UIE0 474 aaPredicted RBP2.78□□□□□ -1.96
UBR3-209ENST00000477461 ANXA10Q9UJ72 324 aa2.78□□□□□ -1.96
UBR3-209ENST00000477461 RPUSD1Q9UJJ7 312 aaKnown RBP2.78□□□□□ -1.96
UBR3-209ENST00000477461 RBM7Q9Y580 266 aaKnown RBP2.78□□□□□ -1.96
UBR3-209ENST00000477461 MED13LQ71F56 2210 aa2.78□□□□□ -1.96
UBR3-209ENST00000477461 NAV2Q8IVL1 2488 aa2.77□□□□□ -1.97
UBR3-209ENST00000477461 IGHV3-43A0A0B4J1X8 118 aa2.77□□□□□ -1.97
UBR3-209ENST00000477461 ANKRD20A5PA0PJZ0 165 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms