RNA–Protein interactions for RNA: ENST00000476664.1

LRCH3-215, Transcript of leucine rich repeats and calponin homology domain containing 3, human

TSL 3

Gene LRCH3, Length 227 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRCH3-215	ENST00000476664	CHST10	O43529	356 aa		4.82	□□□□□ -1.64
LRCH3-215	ENST00000476664	GCM2	O75603	506 aa	Predicted RBP	4.82	□□□□□ -1.64
LRCH3-215	ENST00000476664	INS	P01308	110 aa		4.82	□□□□□ -1.64
LRCH3-215	ENST00000476664	SOD3	P08294	240 aa		4.82	□□□□□ -1.64
LRCH3-215	ENST00000476664	ZBTB25	P24278	435 aa		4.82	□□□□□ -1.64
LRCH3-215	ENST00000476664	CRIP2	P52943	208 aa	Predicted RBP	4.82	□□□□□ -1.64
LRCH3-215	ENST00000476664	C3orf33	Q6P1S2	294 aa		4.82	□□□□□ -1.64
LRCH3-215	ENST00000476664	SHISA6	Q6ZSJ9	500 aa		4.82	□□□□□ -1.64
LRCH3-215	ENST00000476664	C18orf65	Q6ZTR6	163 aa		4.82	□□□□□ -1.64
LRCH3-215	ENST00000476664	ZNF440	Q8IYI8	595 aa		4.82	□□□□□ -1.64
LRCH3-215	ENST00000476664	OR11G2	Q8NGC1	345 aa		4.82	□□□□□ -1.64
LRCH3-215	ENST00000476664	OR4X1	Q8NH49	305 aa		4.82	□□□□□ -1.64
LRCH3-215	ENST00000476664	OR51H1	Q8NH63	302 aa		4.82	□□□□□ -1.64
LRCH3-215	ENST00000476664	RNASE6	Q93091	150 aa	Known RBP	4.82	□□□□□ -1.64
LRCH3-215	ENST00000476664	BORCS7	Q96B45	105 aa		4.82	□□□□□ -1.64
LRCH3-215	ENST00000476664	OLFM3	Q96PB7	478 aa		4.82	□□□□□ -1.64
LRCH3-215	ENST00000476664	VGLL1	Q99990	258 aa		4.82	□□□□□ -1.64
LRCH3-215	ENST00000476664	MED18	Q9BUE0	208 aa		4.82	□□□□□ -1.64
LRCH3-215	ENST00000476664	GGTLC1	Q9BX51	225 aa		4.82	□□□□□ -1.64
LRCH3-215	ENST00000476664	OR12D3	Q9UGF7	316 aa		4.82	□□□□□ -1.64
LRCH3-215	ENST00000476664	PCYT1B	Q9Y5K3	369 aa	Predicted RBP	4.82	□□□□□ -1.64
LRCH3-215	ENST00000476664	ARHGAP21	Q5T5U3	1957 aa		4.82	□□□□□ -1.64
LRCH3-215	ENST00000476664	DOCK4	Q8N1I0	1966 aa		4.82	□□□□□ -1.64
LRCH3-215	ENST00000476664	IGLV11-55	A0A075B6I3	123 aa		4.81	□□□□□ -1.64
LRCH3-215	ENST00000476664	TMEM72	A0PK05	275 aa		4.81	□□□□□ -1.64
LRCH3-215	ENST00000476664	TMEM250	H0YL14	139 aa		4.81	□□□□□ -1.64
LRCH3-215	ENST00000476664	STK16	O75716	305 aa		4.81	□□□□□ -1.64
LRCH3-215	ENST00000476664	IFNA1	P01562	189 aa		4.81	□□□□□ -1.64
LRCH3-215	ENST00000476664	IGLV2-8	P01709	118 aa		4.81	□□□□□ -1.64
LRCH3-215	ENST00000476664	IGHV3-11	P01762	117 aa		4.81	□□□□□ -1.64
LRCH3-215	ENST00000476664	HMGN1	P05114	100 aa		4.81	□□□□□ -1.64
LRCH3-215	ENST00000476664	UQCRH	P07919	91 aa		4.81	□□□□□ -1.64
LRCH3-215	ENST00000476664	IMPA1	P29218	277 aa		4.81	□□□□□ -1.64
LRCH3-215	ENST00000476664	RPL5	P46777	297 aa	Known RBP	4.81	□□□□□ -1.64
LRCH3-215	ENST00000476664	GZMM	P51124	257 aa		4.81	□□□□□ -1.64
LRCH3-215	ENST00000476664	RAP1A	P62834	184 aa		4.81	□□□□□ -1.64
LRCH3-215	ENST00000476664	TSN	Q15631	228 aa	Known RBP	4.81	□□□□□ -1.64
LRCH3-215	ENST00000476664	IL17A	Q16552	155 aa		4.81	□□□□□ -1.64
LRCH3-215	ENST00000476664	ZNF773	Q6PK81	442 aa		4.81	□□□□□ -1.64
LRCH3-215	ENST00000476664	ZNF550	Q7Z398	422 aa		4.81	□□□□□ -1.64
LRCH3-215	ENST00000476664	ZNF584	Q8IVC4	421 aa		4.81	□□□□□ -1.64
LRCH3-215	ENST00000476664	EXOSC8	Q96B26	276 aa	Known RBP	4.81	□□□□□ -1.64
LRCH3-215	ENST00000476664	SFRP2	Q96HF1	295 aa		4.81	□□□□□ -1.64
LRCH3-215	ENST00000476664	C18orf15	Q96N68	181 aa		4.81	□□□□□ -1.64
LRCH3-215	ENST00000476664	C6orf62	Q9GZU0	229 aa	Predicted RBP	4.81	□□□□□ -1.64
LRCH3-215	ENST00000476664	ENY2	Q9NPA8	101 aa		4.81	□□□□□ -1.64
LRCH3-215	ENST00000476664	INIP	Q9NRY2	104 aa		4.81	□□□□□ -1.64
LRCH3-215	ENST00000476664	OPTC	Q9UBM4	332 aa		4.81	□□□□□ -1.64
LRCH3-215	ENST00000476664	ZNF225	Q9UK10	706 aa		4.81	□□□□□ -1.64
LRCH3-215	ENST00000476664	CARHSP1	Q9Y2V2	147 aa	Known RBP	4.81	□□□□□ -1.64
LRCH3-215	ENST00000476664	CACNG2	Q9Y698	323 aa		4.81	□□□□□ -1.64
LRCH3-215	ENST00000476664	CSMD3	Q7Z407	3707 aa		4.81	□□□□□ -1.64
LRCH3-215	ENST00000476664	EEF1E1-BLOC1S5	C9J1V9	151 aa		4.8	□□□□□ -1.64
LRCH3-215	ENST00000476664		F5H5P2	479 aa		4.8	□□□□□ -1.64
LRCH3-215	ENST00000476664	EEF1E1	O43324	174 aa	Known RBP	4.8	□□□□□ -1.64
LRCH3-215	ENST00000476664	SS18L1	O75177	396 aa	Predicted RBP	4.8	□□□□□ -1.64
LRCH3-215	ENST00000476664	HIST1H1T	P22492	207 aa	Predicted RBP	4.8	□□□□□ -1.64
LRCH3-215	ENST00000476664	ZNF136	P52737	540 aa		4.8	□□□□□ -1.64
LRCH3-215	ENST00000476664	RAB2A	P61019	212 aa		4.8	□□□□□ -1.64
LRCH3-215	ENST00000476664	HLA-DRB3	P79483	266 aa		4.8	□□□□□ -1.64
LRCH3-215	ENST00000476664	PSG4	Q00888	419 aa		4.8	□□□□□ -1.64
LRCH3-215	ENST00000476664	FABP5	Q01469	135 aa		4.8	□□□□□ -1.64
LRCH3-215	ENST00000476664	PMAIP1	Q13794	54 aa		4.8	□□□□□ -1.64
LRCH3-215	ENST00000476664	SNRNP35	Q16560	246 aa	Known RBP	4.8	□□□□□ -1.64
LRCH3-215	ENST00000476664	ZCWPW2	Q504Y3	356 aa		4.8	□□□□□ -1.64
LRCH3-215	ENST00000476664	MEST	Q5EB52	335 aa		4.8	□□□□□ -1.64
LRCH3-215	ENST00000476664	LCN8	Q6JVE9	175 aa		4.8	□□□□□ -1.64
LRCH3-215	ENST00000476664	CYHR1	Q6ZMK1	362 aa		4.8	□□□□□ -1.64
LRCH3-215	ENST00000476664	TMEM144	Q7Z5S9	345 aa		4.8	□□□□□ -1.64
LRCH3-215	ENST00000476664	CEND1	Q8N111	149 aa		4.8	□□□□□ -1.64
LRCH3-215	ENST00000476664	ZNF645	Q8N7E2	425 aa		4.8	□□□□□ -1.64
LRCH3-215	ENST00000476664		Q8N9P0	234 aa	Predicted RBP	4.8	□□□□□ -1.64
LRCH3-215	ENST00000476664	COQ8A	Q8NI60	647 aa		4.8	□□□□□ -1.64
LRCH3-215	ENST00000476664	C15orf40	Q8WUR7	153 aa		4.8	□□□□□ -1.64
LRCH3-215	ENST00000476664	GNB1L	Q9BYB4	327 aa		4.8	□□□□□ -1.64
LRCH3-215	ENST00000476664	TMPRSS5	Q9H3S3	457 aa		4.8	□□□□□ -1.64
LRCH3-215	ENST00000476664	BIN3	Q9NQY0	253 aa		4.8	□□□□□ -1.64
LRCH3-215	ENST00000476664	DHCR7	Q9UBM7	475 aa	Known RBP	4.8	□□□□□ -1.64
LRCH3-215	ENST00000476664	LINC00527	Q9UJ94	153 aa		4.8	□□□□□ -1.64
LRCH3-215	ENST00000476664	NEU3	Q9UQ49	428 aa		4.8	□□□□□ -1.64
LRCH3-215	ENST00000476664	ANGPT4	Q9Y264	503 aa		4.8	□□□□□ -1.64
LRCH3-215	ENST00000476664	OR6C6	A6NF89	314 aa		4.79	□□□□□ -1.64
LRCH3-215	ENST00000476664		E7EQ34	232 aa		4.79	□□□□□ -1.64
LRCH3-215	ENST00000476664	TTR	P02766	147 aa		4.79	□□□□□ -1.64
LRCH3-215	ENST00000476664	FAM228B	P0C875	321 aa		4.79	□□□□□ -1.64
LRCH3-215	ENST00000476664	IFI30	P13284	250 aa		4.79	□□□□□ -1.64
LRCH3-215	ENST00000476664	GABRA4	P48169	554 aa		4.79	□□□□□ -1.64
LRCH3-215	ENST00000476664	TAS2R41	P59536	307 aa		4.79	□□□□□ -1.64
LRCH3-215	ENST00000476664	DCD	P81605	110 aa	Known RBP	4.79	□□□□□ -1.64
LRCH3-215	ENST00000476664	PRDX4	Q13162	271 aa		4.79	□□□□□ -1.64
LRCH3-215	ENST00000476664	TEX36	Q5VZQ5	186 aa		4.79	□□□□□ -1.64
LRCH3-215	ENST00000476664	SMARCD3	Q6STE5	483 aa		4.79	□□□□□ -1.64
LRCH3-215	ENST00000476664	TMEM205	Q6UW68	189 aa		4.79	□□□□□ -1.64
LRCH3-215	ENST00000476664		Q6ZRU5	148 aa		4.79	□□□□□ -1.64
LRCH3-215	ENST00000476664	FA2H	Q7L5A8	372 aa		4.79	□□□□□ -1.64
LRCH3-215	ENST00000476664	PHF13	Q86YI8	300 aa	Predicted RBP	4.79	□□□□□ -1.64
LRCH3-215	ENST00000476664	OR5H2	Q8NGV7	314 aa		4.79	□□□□□ -1.64
LRCH3-215	ENST00000476664	OR52D1	Q9H346	318 aa		4.79	□□□□□ -1.64
LRCH3-215	ENST00000476664	FAM215A	Q9Y5M1	114 aa		4.79	□□□□□ -1.64
LRCH3-215	ENST00000476664	KIAA1549	Q9HCM3	1950 aa		4.78	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 119.8 ms