RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 Q6Q795 121 aa4.93□□□□□ -1.62
SMARCE1-208ENST00000474246 UNQ5815/PRO19632Q6UWF5 114 aa4.93□□□□□ -1.62
SMARCE1-208ENST00000474246 P2RY8Q86VZ1 359 aa4.93□□□□□ -1.62
SMARCE1-208ENST00000474246 SGPP2Q8IWX5 399 aa4.93□□□□□ -1.62
SMARCE1-208ENST00000474246 OR10G6Q8NH81 332 aa4.93□□□□□ -1.62
SMARCE1-208ENST00000474246 FGF13Q92913 245 aa4.93□□□□□ -1.62
SMARCE1-208ENST00000474246 TMEM147Q9BVK8 224 aa4.93□□□□□ -1.62
SMARCE1-208ENST00000474246 SLIRPQ9GZT3 109 aaKnown RBP4.93□□□□□ -1.62
SMARCE1-208ENST00000474246 KCNIP2Q9NS61 270 aa4.93□□□□□ -1.62
SMARCE1-208ENST00000474246 ZNF226Q9NYT6 803 aa4.93□□□□□ -1.62
SMARCE1-208ENST00000474246 LAMTOR3Q9UHA4 124 aa4.93□□□□□ -1.62
SMARCE1-208ENST00000474246 PROCRQ9UNN8 238 aa4.93□□□□□ -1.62
SMARCE1-208ENST00000474246 MYH9P35579 1960 aaKnown RBP4.93□□□□□ -1.62
SMARCE1-208ENST00000474246 NCBP2LA6PVI3 153 aaKnown RBP4.93□□□□□ -1.62
SMARCE1-208ENST00000474246 DUS4LO95620 317 aaKnown RBP4.93□□□□□ -1.62
SMARCE1-208ENST00000474246 MPGP29372 298 aa4.93□□□□□ -1.62
SMARCE1-208ENST00000474246 THBS3P49746 956 aa4.93□□□□□ -1.62
SMARCE1-208ENST00000474246 ZNF83P51522 516 aa4.93□□□□□ -1.62
SMARCE1-208ENST00000474246 ZNF146Q15072 292 aa4.93□□□□□ -1.62
SMARCE1-208ENST00000474246 HES3Q5TGS1 186 aa4.93□□□□□ -1.62
SMARCE1-208ENST00000474246 PRR22Q8IZ63 422 aa4.93□□□□□ -1.62
SMARCE1-208ENST00000474246 DEFB125Q8N687 156 aa4.93□□□□□ -1.62
SMARCE1-208ENST00000474246 FRZBQ92765 325 aa4.93□□□□□ -1.62
SMARCE1-208ENST00000474246 TSLPQ969D9 159 aa4.93□□□□□ -1.62
SMARCE1-208ENST00000474246 ZNF331Q9NQX6 463 aaPredicted RBP4.93□□□□□ -1.62
SMARCE1-208ENST00000474246 MDFICQ9P1T7 246 aa4.93□□□□□ -1.62
SMARCE1-208ENST00000474246 WRAP73Q9P2S5 460 aaPredicted RBP4.93□□□□□ -1.62
SMARCE1-208ENST00000474246 LOXHD1Q8IVV2 1947 aa4.92□□□□□ -1.62
SMARCE1-208ENST00000474246 A0A0A6YYD4 124 aa4.92□□□□□ -1.62
SMARCE1-208ENST00000474246 MYOCOSA0A1B0GUC4 107 aa4.92□□□□□ -1.62
SMARCE1-208ENST00000474246 SMIM35A0A1B0GVV1 85 aa4.92□□□□□ -1.62
SMARCE1-208ENST00000474246 PRRG2O14669 202 aa4.92□□□□□ -1.62
SMARCE1-208ENST00000474246 ARL6IP5O75915 188 aa4.92□□□□□ -1.62
SMARCE1-208ENST00000474246 TNFP01375 233 aa4.92□□□□□ -1.62
SMARCE1-208ENST00000474246 NDUFV3P56181 108 aaKnown RBP4.92□□□□□ -1.62
SMARCE1-208ENST00000474246 LOXL1Q08397 574 aaPredicted RBP4.92□□□□□ -1.62
SMARCE1-208ENST00000474246 KLRD1Q13241 179 aa4.92□□□□□ -1.62
SMARCE1-208ENST00000474246 CTF1Q16619 201 aa4.92□□□□□ -1.62
SMARCE1-208ENST00000474246 MLANAQ16655 118 aa4.92□□□□□ -1.62
SMARCE1-208ENST00000474246 Q75L30 129 aa4.92□□□□□ -1.62
SMARCE1-208ENST00000474246 TCF23Q7RTU1 214 aa4.92□□□□□ -1.62
SMARCE1-208ENST00000474246 OR51G1Q8NGK1 321 aa4.92□□□□□ -1.62
SMARCE1-208ENST00000474246 C10orf82Q8WW14 230 aa4.92□□□□□ -1.62
SMARCE1-208ENST00000474246 C19orf73Q9NVV2 129 aa4.92□□□□□ -1.62
SMARCE1-208ENST00000474246 TAAR2Q9P1P5 351 aa4.92□□□□□ -1.62
SMARCE1-208ENST00000474246 KLF13Q9Y2Y9 288 aaPredicted RBP4.92□□□□□ -1.62
SMARCE1-208ENST00000474246 IGLV3-22A0A075B6J6 115 aa4.91□□□□□ -1.62
SMARCE1-208ENST00000474246 A0A1B0GWB2 263 aa4.91□□□□□ -1.62
SMARCE1-208ENST00000474246 A6NDN8 102 aa4.91□□□□□ -1.62
SMARCE1-208ENST00000474246 OR4C45A6NMZ5 311 aa4.91□□□□□ -1.62
SMARCE1-208ENST00000474246 WISP2O76076 250 aa4.91□□□□□ -1.62
SMARCE1-208ENST00000474246 NCR2O95944 276 aa4.91□□□□□ -1.62
SMARCE1-208ENST00000474246 CA2P00918 260 aa4.91□□□□□ -1.62
SMARCE1-208ENST00000474246 PGA5P0DJD9 388 aa4.91□□□□□ -1.62
SMARCE1-208ENST00000474246 BCL2P10415 239 aa4.91□□□□□ -1.62
SMARCE1-208ENST00000474246 LAMP1P11279 417 aa4.91□□□□□ -1.62
SMARCE1-208ENST00000474246 NFYBP25208 207 aa4.91□□□□□ -1.62
SMARCE1-208ENST00000474246 SNCAP37840 140 aa4.91□□□□□ -1.62
SMARCE1-208ENST00000474246 CCR2P41597 374 aa4.91□□□□□ -1.62
SMARCE1-208ENST00000474246 ZNF140P52738 457 aaPredicted RBP4.91□□□□□ -1.62
SMARCE1-208ENST00000474246 H2BFSP57053 126 aa4.91□□□□□ -1.62
SMARCE1-208ENST00000474246 Q499Y3 187 aa4.91□□□□□ -1.62
SMARCE1-208ENST00000474246 LYRM7Q5U5X0 104 aa4.91□□□□□ -1.62
SMARCE1-208ENST00000474246 AMMECR1LQ6DCA0 310 aa4.91□□□□□ -1.62
SMARCE1-208ENST00000474246 KCTD18Q6PI47 426 aaPredicted RBP4.91□□□□□ -1.62
SMARCE1-208ENST00000474246 HEPN1Q6WQI6 88 aa4.91□□□□□ -1.62
SMARCE1-208ENST00000474246 ZNF730Q6ZMV8 503 aa4.91□□□□□ -1.62
SMARCE1-208ENST00000474246 SLC25A45Q8N413 288 aa4.91□□□□□ -1.62
SMARCE1-208ENST00000474246 NUP35Q8NFH5 326 aa4.91□□□□□ -1.62
SMARCE1-208ENST00000474246 LMO3Q8TAP4 145 aa4.91□□□□□ -1.62
SMARCE1-208ENST00000474246 OR51E1Q8TCB6 317 aa4.91□□□□□ -1.62
SMARCE1-208ENST00000474246 GNB1LQ9BYB4 327 aa4.91□□□□□ -1.62
SMARCE1-208ENST00000474246 PLA2G12AQ9BZM1 189 aa4.91□□□□□ -1.62
SMARCE1-208ENST00000474246 PRSS22Q9GZN4 317 aa4.91□□□□□ -1.62
SMARCE1-208ENST00000474246 TMEM191AQ9H0A3 160 aa4.91□□□□□ -1.62
SMARCE1-208ENST00000474246 EXOSC3Q9NQT5 275 aaKnown RBP4.91□□□□□ -1.62
SMARCE1-208ENST00000474246 MARCH5Q9NX47 278 aa4.91□□□□□ -1.62
SMARCE1-208ENST00000474246 TRBV5-7A0A0A0MS05 114 aa4.91□□□□□ -1.62
SMARCE1-208ENST00000474246 SCO2A0A1W2PP80 73 aa4.91□□□□□ -1.62
SMARCE1-208ENST00000474246 CD300LBA8K4G0 201 aa4.91□□□□□ -1.62
SMARCE1-208ENST00000474246 HIST1H2BKO60814 126 aa4.91□□□□□ -1.62
SMARCE1-208ENST00000474246 STC2O76061 302 aa4.91□□□□□ -1.62
SMARCE1-208ENST00000474246 OR2A4O95047 310 aa4.91□□□□□ -1.62
SMARCE1-208ENST00000474246 ATP5G1P05496 136 aa4.91□□□□□ -1.62
SMARCE1-208ENST00000474246 HIST1H2BJP06899 126 aa4.91□□□□□ -1.62
SMARCE1-208ENST00000474246 RNASE1P07998 156 aaKnown RBP4.91□□□□□ -1.62
SMARCE1-208ENST00000474246 PGA4P0DJD7 388 aa4.91□□□□□ -1.62
SMARCE1-208ENST00000474246 PGA3P0DJD8 388 aa4.91□□□□□ -1.62
SMARCE1-208ENST00000474246 RPS4Y1P22090 263 aaKnown RBP4.91□□□□□ -1.62
SMARCE1-208ENST00000474246 CA6P23280 308 aa4.91□□□□□ -1.62
SMARCE1-208ENST00000474246 HIST1H2BOP23527 126 aa4.91□□□□□ -1.62
SMARCE1-208ENST00000474246 HIST1H2BBP33778 126 aa4.91□□□□□ -1.62
SMARCE1-208ENST00000474246 LPAR6P43657 344 aa4.91□□□□□ -1.62
SMARCE1-208ENST00000474246 SLC18A1P54219 525 aa4.91□□□□□ -1.62
SMARCE1-208ENST00000474246 HIST1H2BDP58876 126 aa4.91□□□□□ -1.62
SMARCE1-208ENST00000474246 HIST1H2BCP62807 126 aa4.91□□□□□ -1.62
SMARCE1-208ENST00000474246 POU3F1Q03052 451 aaPredicted RBP4.91□□□□□ -1.62
SMARCE1-208ENST00000474246 ENDOGQ14249 297 aaKnown RBP4.91□□□□□ -1.62
SMARCE1-208ENST00000474246 HIST2H2BEQ16778 126 aa4.91□□□□□ -1.62
SMARCE1-208ENST00000474246 C12orf74Q32Q52 190 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms