RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 GP6Q9HCN6 339 aa11.4□□□□□ -0.58
NPHP4-207ENST00000470763 KNTC1P50748 2209 aa11.4□□□□□ -0.58
NPHP4-207ENST00000470763 TRAV30A0A087WSZ9 112 aa11.4□□□□□ -0.59
NPHP4-207ENST00000470763 A0A1W2PQM1 296 aa11.4□□□□□ -0.59
NPHP4-207ENST00000470763 HSBP1O75506 76 aa11.4□□□□□ -0.59
NPHP4-207ENST00000470763 PPBPP02775 128 aa11.4□□□□□ -0.59
NPHP4-207ENST00000470763 EIF4EBP1Q13541 118 aaPredicted RBP11.4□□□□□ -0.59
NPHP4-207ENST00000470763 LTC4SQ16873 150 aa11.4□□□□□ -0.59
NPHP4-207ENST00000470763 MUC15Q8N387 334 aa11.4□□□□□ -0.59
NPHP4-207ENST00000470763 KIR3DL3Q8N743 410 aa11.4□□□□□ -0.59
NPHP4-207ENST00000470763 NINJ1Q92982 152 aa11.4□□□□□ -0.59
NPHP4-207ENST00000470763 SSBP3Q9BWW4 388 aaPredicted RBP11.4□□□□□ -0.59
NPHP4-207ENST00000470763 A0A1W2PN81 502 aa11.39□□□□□ -0.59
NPHP4-207ENST00000470763 M0R2Z0 102 aa11.39□□□□□ -0.59
NPHP4-207ENST00000470763 HBZP02008 142 aa11.39□□□□□ -0.59
NPHP4-207ENST00000470763 COX6A1P12074 109 aa11.39□□□□□ -0.59
NPHP4-207ENST00000470763 USF1P22415 310 aaPredicted RBP11.39□□□□□ -0.59
NPHP4-207ENST00000470763 RPL19P84098 196 aaKnown RBP11.39□□□□□ -0.59
NPHP4-207ENST00000470763 AESQ08117 197 aa11.39□□□□□ -0.59
NPHP4-207ENST00000470763 PMCHL1Q16048 86 aa11.39□□□□□ -0.59
NPHP4-207ENST00000470763 SPATA12Q7Z6I5 190 aa11.39□□□□□ -0.59
NPHP4-207ENST00000470763 SCCPDHQ8NBX0 429 aa11.39□□□□□ -0.59
NPHP4-207ENST00000470763 SH2D2AQ9NP31 389 aa11.39□□□□□ -0.59
NPHP4-207ENST00000470763 FAM181BA6NEQ2 426 aa11.39□□□□□ -0.59
NPHP4-207ENST00000470763 OR2T8A6NH00 312 aa11.39□□□□□ -0.59
NPHP4-207ENST00000470763 ZNF891A8MT65 544 aaPredicted RBP11.39□□□□□ -0.59
NPHP4-207ENST00000470763 OCIAD2Q56VL3 154 aa11.39□□□□□ -0.59
NPHP4-207ENST00000470763 SMIM15Q7Z3B0 74 aa11.39□□□□□ -0.59
NPHP4-207ENST00000470763 STPG3Q8N7X2 389 aa11.39□□□□□ -0.59
NPHP4-207ENST00000470763 OR5B3Q8NH48 314 aa11.39□□□□□ -0.59
NPHP4-207ENST00000470763 ZNF596Q8TC21 504 aa11.39□□□□□ -0.59
NPHP4-207ENST00000470763 C11orf52Q96A22 123 aa11.39□□□□□ -0.59
NPHP4-207ENST00000470763 GCM1Q9NP62 436 aa11.39□□□□□ -0.59
NPHP4-207ENST00000470763 MPC1Q9Y5U8 109 aa11.39□□□□□ -0.59
NPHP4-207ENST00000470763 IGHV5-10-1A0A0J9YXX1 117 aa11.38□□□□□ -0.59
NPHP4-207ENST00000470763 MPDU1O75352 247 aa11.38□□□□□ -0.59
NPHP4-207ENST00000470763 HLA-DQA1P01909 254 aa11.38□□□□□ -0.59
NPHP4-207ENST00000470763 CCL7P80098 99 aa11.38□□□□□ -0.59
NPHP4-207ENST00000470763 PSG5Q15238 335 aa11.38□□□□□ -0.59
NPHP4-207ENST00000470763 RNASEKQ6P5S7 137 aaKnown RBP11.38□□□□□ -0.59
NPHP4-207ENST00000470763 MIR17HGQ75NE6 70 aa11.38□□□□□ -0.59
NPHP4-207ENST00000470763 TUSC5Q8IXB3 177 aa11.38□□□□□ -0.59
NPHP4-207ENST00000470763 C1orf159Q96HA4 380 aa11.38□□□□□ -0.59
NPHP4-207ENST00000470763 IMMP1LQ96LU5 166 aa11.38□□□□□ -0.59
NPHP4-207ENST00000470763 PKIBQ9C010 78 aa11.38□□□□□ -0.59
NPHP4-207ENST00000470763 TECRQ9NZ01 308 aaKnown RBP11.38□□□□□ -0.59
NPHP4-207ENST00000470763 PSG11Q9UQ72 335 aa11.38□□□□□ -0.59
NPHP4-207ENST00000470763 WASHC3Q9Y3C0 194 aa11.38□□□□□ -0.59
NPHP4-207ENST00000470763 AHRRA9YTQ3 701 aa11.38□□□□□ -0.59
NPHP4-207ENST00000470763 P04436 131 aa11.38□□□□□ -0.59
NPHP4-207ENST00000470763 DUSP3P51452 185 aaPredicted RBP11.38□□□□□ -0.59
NPHP4-207ENST00000470763 PRAMEF5Q5TYX0 476 aa11.38□□□□□ -0.59
NPHP4-207ENST00000470763 PRAMEF6Q5VXH4 476 aa11.38□□□□□ -0.59
NPHP4-207ENST00000470763 OR4A47Q6IF82 309 aa11.38□□□□□ -0.59
NPHP4-207ENST00000470763 ZBTB34Q8NCN2 500 aa11.38□□□□□ -0.59
NPHP4-207ENST00000470763 CLEC5AQ9NY25 188 aa11.38□□□□□ -0.59
NPHP4-207ENST00000470763 CLCF1Q9UBD9 225 aa11.38□□□□□ -0.59
NPHP4-207ENST00000470763 PRRC2CQ9Y520 2896 aaKnown RBP11.38□□□□□ -0.59
NPHP4-207ENST00000470763 PATE3B3GLJ2 98 aa11.38□□□□□ -0.59
NPHP4-207ENST00000470763 FCGR3BO75015 233 aa11.38□□□□□ -0.59
NPHP4-207ENST00000470763 SS18L1O75177 396 aaPredicted RBP11.38□□□□□ -0.59
NPHP4-207ENST00000470763 SSTR5P35346 364 aa11.38□□□□□ -0.59
NPHP4-207ENST00000470763 GPR6P46095 362 aaPredicted RBP11.38□□□□□ -0.59
NPHP4-207ENST00000470763 RHOBP62745 196 aa11.38□□□□□ -0.59
NPHP4-207ENST00000470763 TIGITQ495A1 244 aa11.38□□□□□ -0.59
NPHP4-207ENST00000470763 IBA57Q5T440 356 aaKnown RBP11.38□□□□□ -0.59
NPHP4-207ENST00000470763 GCNT2Q8N0V5 402 aa11.38□□□□□ -0.59
NPHP4-207ENST00000470763 FAM168AQ92567 244 aa11.38□□□□□ -0.59
NPHP4-207ENST00000470763 HES4Q9HCC6 221 aa11.38□□□□□ -0.59
NPHP4-207ENST00000470763 CHD8Q9HCK8 2581 aa11.38□□□□□ -0.59
NPHP4-207ENST00000470763 CEP295Q9C0D2 2601 aa11.37□□□□□ -0.59
NPHP4-207ENST00000470763 CEP192Q8TEP8 1941 aa11.37□□□□□ -0.59
NPHP4-207ENST00000470763 MT-CO3P00414 261 aa11.37□□□□□ -0.59
NPHP4-207ENST00000470763 REG1AP05451 166 aa11.37□□□□□ -0.59
NPHP4-207ENST00000470763 GDF1P27539 372 aa11.37□□□□□ -0.59
NPHP4-207ENST00000470763 GABRA2P47869 451 aa11.37□□□□□ -0.59
NPHP4-207ENST00000470763 SELENOVP59797 346 aa11.37□□□□□ -0.59
NPHP4-207ENST00000470763 CXorf67Q86X51 503 aaPredicted RBP11.37□□□□□ -0.59
NPHP4-207ENST00000470763 PNKDQ8N490 385 aa11.37□□□□□ -0.59
NPHP4-207ENST00000470763 SLC24A4Q8NFF2 622 aa11.37□□□□□ -0.59
NPHP4-207ENST00000470763 TAAR6Q96RI8 345 aa11.37□□□□□ -0.59
NPHP4-207ENST00000470763 LY96Q9Y6Y9 160 aa11.37□□□□□ -0.59
NPHP4-207ENST00000470763 PI4KAP42356 2102 aa11.37□□□□□ -0.59
NPHP4-207ENST00000470763 TRAV3A0A0B4J244 114 aa11.37□□□□□ -0.59
NPHP4-207ENST00000470763 MT-CO2P00403 227 aa11.37□□□□□ -0.59
NPHP4-207ENST00000470763 GRPP07492 148 aa11.37□□□□□ -0.59
NPHP4-207ENST00000470763 CA7P43166 264 aa11.37□□□□□ -0.59
NPHP4-207ENST00000470763 RPL8P62917 257 aaKnown RBP11.37□□□□□ -0.59
NPHP4-207ENST00000470763 NUDT10Q8NFP7 164 aa11.37□□□□□ -0.59
NPHP4-207ENST00000470763 ZC2HC1AQ96GY0 325 aa11.37□□□□□ -0.59
NPHP4-207ENST00000470763 CACNA1EQ15878 2313 aa11.37□□□□□ -0.59
NPHP4-207ENST00000470763 IGHV3-13P01766 116 aa11.36□□□□□ -0.59
NPHP4-207ENST00000470763 IGHV3-7P01780 117 aa11.36□□□□□ -0.59
NPHP4-207ENST00000470763 CELA3BP08861 270 aa11.36□□□□□ -0.59
NPHP4-207ENST00000470763 UBE2G1P62253 170 aa11.36□□□□□ -0.59
NPHP4-207ENST00000470763 ARG2P78540 354 aa11.36□□□□□ -0.59
NPHP4-207ENST00000470763 OR4A16Q8NH70 328 aa11.36□□□□□ -0.59
NPHP4-207ENST00000470763 SSBP4Q9BWG4 385 aaPredicted RBP11.36□□□□□ -0.59
NPHP4-207ENST00000470763 ZNF331Q9NQX6 463 aaPredicted RBP11.36□□□□□ -0.59
NPHP4-207ENST00000470763 SH2D7A6NKC9 451 aaPredicted RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms