RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 IGKV1D-33P01593 117 aa14.56□□□□□ -0.08
SMC4-211ENST00000469858 IGKV1-33P01594 117 aa14.56□□□□□ -0.08
SMC4-211ENST00000469858 CD24P25063 80 aa14.56□□□□□ -0.08
SMC4-211ENST00000469858 MRGPRG-AS1Q2M3A8 158 aa14.56□□□□□ -0.08
SMC4-211ENST00000469858 CCDC144NLQ6NUI1 221 aa14.56□□□□□ -0.08
SMC4-211ENST00000469858 FAM213BQ8TBF2 198 aa14.56□□□□□ -0.08
SMC4-211ENST00000469858 TAF15Q92804 592 aaKnown RBP eCLIP14.56□□□□□ -0.087e-26■■■■□ 25.9
SMC4-211ENST00000469858 PARD6GQ9BYG4 376 aaPredicted RBP14.56□□□□□ -0.08
SMC4-211ENST00000469858 DOPEY2Q9Y3R5 2298 aa14.55□□□□□ -0.08
SMC4-211ENST00000469858 CRYGBP07316 175 aa14.55□□□□□ -0.08
SMC4-211ENST00000469858 HABP2Q14520 560 aaPredicted RBP14.55□□□□□ -0.08
SMC4-211ENST00000469858 HSD17B13Q7Z5P4 300 aaPredicted RBP14.55□□□□□ -0.08
SMC4-211ENST00000469858 MMD2Q8IY49 270 aa14.55□□□□□ -0.08
SMC4-211ENST00000469858 SIGLEC9Q9Y336 463 aa14.55□□□□□ -0.08
SMC4-211ENST00000469858 ANKRD17O75179 2603 aaKnown RBP14.55□□□□□ -0.08
SMC4-211ENST00000469858 CGB1A6NKQ9 187 aa14.54□□□□□ -0.08
SMC4-211ENST00000469858 UMAD1C9J7I0 102 aa14.54□□□□□ -0.08
SMC4-211ENST00000469858 TRIM77I1YAP6 450 aa14.54□□□□□ -0.08
SMC4-211ENST00000469858 FGF7P21781 194 aa14.54□□□□□ -0.08
SMC4-211ENST00000469858 TNXAQ16473 311 aa14.54□□□□□ -0.08
SMC4-211ENST00000469858 PRSS8Q16651 343 aa14.54□□□□□ -0.08
SMC4-211ENST00000469858 VWC2Q2TAL6 325 aa14.54□□□□□ -0.08
SMC4-211ENST00000469858 TOR2AQ5JU69 321 aa14.54□□□□□ -0.08
SMC4-211ENST00000469858 AKR1C8PQ5T2L2 129 aa14.54□□□□□ -0.08
SMC4-211ENST00000469858 MARC2Q969Z3 335 aa14.54□□□□□ -0.08
SMC4-211ENST00000469858 RNF5Q99942 180 aa14.54□□□□□ -0.08
SMC4-211ENST00000469858 FBXL15Q9H469 300 aa14.54□□□□□ -0.08
SMC4-211ENST00000469858 TBL2Q9Y4P3 447 aaKnown RBP14.54□□□□□ -0.08
SMC4-211ENST00000469858 CSMD2Q7Z408 3487 aa14.54□□□□□ -0.08
SMC4-211ENST00000469858 SMCO3A2RU48 225 aa14.54□□□□□ -0.08
SMC4-211ENST00000469858 OOSP1A8MZH6 123 aa14.54□□□□□ -0.08
SMC4-211ENST00000469858 PRSS46E5RG02 174 aa14.54□□□□□ -0.08
SMC4-211ENST00000469858 ACTL6BO94805 426 aa14.54□□□□□ -0.08
SMC4-211ENST00000469858 PAX8Q06710 450 aa14.54□□□□□ -0.08
SMC4-211ENST00000469858 HES1Q14469 280 aa14.54□□□□□ -0.08
SMC4-211ENST00000469858 MMDQ15546 238 aa14.54□□□□□ -0.08
SMC4-211ENST00000469858 PPP1R27Q86WC6 154 aa14.54□□□□□ -0.08
SMC4-211ENST00000469858 PSMG3Q9BT73 122 aaPredicted RBP14.54□□□□□ -0.08
SMC4-211ENST00000469858 CELSR2Q9HCU4 2923 aa14.54□□□□□ -0.08
SMC4-211ENST00000469858 A0A1W2PN81 502 aa14.53□□□□□ -0.08
SMC4-211ENST00000469858 MOSP00540 346 aa14.53□□□□□ -0.08
SMC4-211ENST00000469858 SAA4P35542 130 aa14.53□□□□□ -0.08
SMC4-211ENST00000469858 CHRNA7P36544 502 aa14.53□□□□□ -0.08
SMC4-211ENST00000469858 SNCAP37840 140 aa14.53□□□□□ -0.08
SMC4-211ENST00000469858 PLGLAQ15195 96 aa14.53□□□□□ -0.08
SMC4-211ENST00000469858 TUSC1Q2TAM9 212 aa14.53□□□□□ -0.08
SMC4-211ENST00000469858 BTNL8Q6UX41 500 aa14.53□□□□□ -0.08
SMC4-211ENST00000469858 A0A1B0GW64 132 aa14.53□□□□□ -0.08
SMC4-211ENST00000469858 SNRNP70P08621 437 aaKnown RBP14.53□□□□□ -0.08
SMC4-211ENST00000469858 SLC25A16P16260 332 aa14.53□□□□□ -0.08
SMC4-211ENST00000469858 GNB1P62873 340 aa14.53□□□□□ -0.08
SMC4-211ENST00000469858 ERHP84090 104 aaKnown RBP14.53□□□□□ -0.08
SMC4-211ENST00000469858 FBLN7Q53RD9 439 aa14.53□□□□□ -0.08
SMC4-211ENST00000469858 EIF4E3Q8N5X7 224 aaKnown RBP14.53□□□□□ -0.08
SMC4-211ENST00000469858 EAF1Q96JC9 268 aaPredicted RBP14.53□□□□□ -0.08
SMC4-211ENST00000469858 MSMBP08118 114 aa14.52□□□□□ -0.09
SMC4-211ENST00000469858 RNASE2P10153 161 aaKnown RBP14.52□□□□□ -0.09
SMC4-211ENST00000469858 DLK1P80370 383 aa14.52□□□□□ -0.09
SMC4-211ENST00000469858 WT1-ASQ06250 92 aa14.52□□□□□ -0.09
SMC4-211ENST00000469858 GGACTQ9BVM4 153 aa14.52□□□□□ -0.09
SMC4-211ENST00000469858 TENM4Q6N022 2769 aa14.52□□□□□ -0.09
SMC4-211ENST00000469858 CENPVL3A0A0U1RRI6 287 aa14.51□□□□□ -0.09
SMC4-211ENST00000469858 AGPAT2O15120 278 aa14.51□□□□□ -0.09
SMC4-211ENST00000469858 NBR2O15453 112 aa14.51□□□□□ -0.09
SMC4-211ENST00000469858 RPL27AP46776 148 aaKnown RBP14.51□□□□□ -0.09
SMC4-211ENST00000469858 ELLP55199 621 aaPredicted RBP14.51□□□□□ -0.09
SMC4-211ENST00000469858 BSXQ3C1V8 233 aa14.51□□□□□ -0.09
SMC4-211ENST00000469858 C2orf83Q53S99 150 aa14.51□□□□□ -0.09
SMC4-211ENST00000469858 IL34Q6ZMJ4 242 aa14.51□□□□□ -0.09
SMC4-211ENST00000469858 OR2T10Q8NGZ9 312 aa14.51□□□□□ -0.09
SMC4-211ENST00000469858 MALSU1Q96EH3 234 aa14.51□□□□□ -0.09
SMC4-211ENST00000469858 NAV3Q8IVL0 2385 aa14.51□□□□□ -0.09
SMC4-211ENST00000469858 PTPN13Q12923 2485 aa14.51□□□□□ -0.09
SMC4-211ENST00000469858 INS-IGF2F8WCM5 200 aa14.51□□□□□ -0.09
SMC4-211ENST00000469858 NPFFO15130 113 aa14.51□□□□□ -0.09
SMC4-211ENST00000469858 SERF2P84101 59 aa14.51□□□□□ -0.09
SMC4-211ENST00000469858 LYPD6BQ8NI32 183 aa14.51□□□□□ -0.09
SMC4-211ENST00000469858 AJUBAQ96IF1 538 aa14.51□□□□□ -0.09
SMC4-211ENST00000469858 NPCDR1Q9BY65 106 aa14.51□□□□□ -0.09
SMC4-211ENST00000469858 VSIRQ9H7M9 311 aa14.51□□□□□ -0.09
SMC4-211ENST00000469858 KIAA1456Q9P272 454 aa14.51□□□□□ -0.09
SMC4-211ENST00000469858 WDR83OSQ9Y284 106 aa14.51□□□□□ -0.09
SMC4-211ENST00000469858 TIMM9Q9Y5J7 89 aa14.51□□□□□ -0.09
SMC4-211ENST00000469858 IGHV3OR16-10A0A075B7F0 116 aa14.5□□□□□ -0.09
SMC4-211ENST00000469858 A0A1B0GV50 99 aa14.5□□□□□ -0.09
SMC4-211ENST00000469858 RAB19A4D1S5 217 aa14.5□□□□□ -0.09
SMC4-211ENST00000469858 TSPAN15O95858 294 aa14.5□□□□□ -0.09
SMC4-211ENST00000469858 OR13C7P0DN81 318 aa14.5□□□□□ -0.09
SMC4-211ENST00000469858 MDKP21741 143 aaPredicted RBP14.5□□□□□ -0.09
SMC4-211ENST00000469858 MAS1LP35410 378 aa14.5□□□□□ -0.09
SMC4-211ENST00000469858 COMPP49747 757 aaPredicted RBP14.5□□□□□ -0.09
SMC4-211ENST00000469858 ARSJQ5FYB0 599 aaPredicted RBP14.5□□□□□ -0.09
SMC4-211ENST00000469858 PIP4P2Q8N4L2 257 aa14.5□□□□□ -0.09
SMC4-211ENST00000469858 CENPEQ02224 2701 aa14.5□□□□□ -0.09
SMC4-211ENST00000469858 POLQO75417 2590 aa14.5□□□□□ -0.09
SMC4-211ENST00000469858 TRAV40A0A0B4J280 105 aa14.49□□□□□ -0.09
SMC4-211ENST00000469858 NUDT19A8MXV4 375 aa14.49□□□□□ -0.09
SMC4-211ENST00000469858 FCN1O00602 326 aa14.49□□□□□ -0.09
SMC4-211ENST00000469858 REG1AP05451 166 aa14.49□□□□□ -0.09
SMC4-211ENST00000469858 APELAP0DMC3 54 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 205.1 ms